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<title>pkgsrc/databases, branch pkgsrc-2016Q3</title>
<subtitle>[no description]</subtitle>
<id>https://git.osdyson.ru/mirror/pkgsrc/atom?h=pkgsrc-2016Q3</id>
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<updated>2016-10-22T16:18:27Z</updated>
<entry>
<title>Pullup ticket #5142 - requested by taca</title>
<updated>2016-10-22T16:18:27Z</updated>
<author>
<name>bsiegert</name>
<email>bsiegert@pkgsrc.org</email>
</author>
<published>2016-10-22T16:18:27Z</published>
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<id>urn:sha1:f2e0e9e86ae7cba5d8fa3ce834d95fa0972b0dff</id>
<content type='text'>
databases/mysql56-client: security fix
databases/mysql56-server: security fix

Revisions pulled up:
- databases/mysql56-client/Makefile.common                      1.36-1.37
- databases/mysql56-client/distinfo                             1.38-1.39
- databases/mysql56-client/patches/patch-client_mysql.cc        deleted
- databases/mysql56-client/patches/patch-cmake_readline.cmake   1.4
- databases/mysql56-server/PLIST                                1.27

---
   Module Name:	pkgsrc
   Committed By:	fhajny
   Date:		Fri Sep 30 11:54:49 UTC 2016

   Modified Files:
   	pkgsrc/databases/mysql56-client: Makefile.common distinfo
   	pkgsrc/databases/mysql56-client/patches: patch-cmake_readline.cmake
   Removed Files:
   	pkgsrc/databases/mysql56-client/patches: patch-client_mysql.cc

   Log Message:
   Change the way readline/editline support is patched, based on what
   mysql57-client has. This fixes at least SmartOS builds, no changes for
   NetBSD (and presumably elsewhere).

---
   Module Name:	pkgsrc
   Committed By:	adam
   Date:		Wed Oct 12 16:58:21 UTC 2016

   Modified Files:
   	pkgsrc/databases/mysql56-client: Makefile.common distinfo
   	pkgsrc/databases/mysql56-server: PLIST

   Log Message:
   Changes 5.6.34:
   Packaging Notes
   ---------------
   RPM and Debian packages now create the /var/lib/mysql-files directory, which is now the default value of the secure_file_priv system variable that specifies a directory for import and export operations.

   Security Notes
   --------------
   Incompatible Change: The secure_file_priv system variable is used to limit the effect of data import and export operations.

   Functionality Added or Changed
   ------------------------------
   yaSSL was upgraded to version 2.4.2. This upgrade corrects issues with: Potential AES side channel leaks; DSA padding for unusual sizes; the SSL_CTX_load_verify_locations() OpenSSL compatibility function failing to handle long path directory names.</content>
</entry>
<entry>
<title>Pullup ticket #5141 - requested by taca</title>
<updated>2016-10-22T16:02:56Z</updated>
<author>
<name>bsiegert</name>
<email>bsiegert@pkgsrc.org</email>
</author>
<published>2016-10-22T16:02:56Z</published>
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<id>urn:sha1:69ec4c45e7b944ff41430c5fbe612b76f40160a3</id>
<content type='text'>
databases/mysql55-client: security fix
databases/mysql55-server: security fix

Revisions pulled up:
- databases/mysql55-client/Makefile.common                      1.55
- databases/mysql55-client/distinfo                             1.53
- databases/mysql55-server/PLIST                                1.45

---
   Module Name:	pkgsrc
   Committed By:	adam
   Date:		Wed Oct 12 16:57:30 UTC 2016

   Modified Files:
   	pkgsrc/databases/mysql55-client: Makefile.common distinfo
   	pkgsrc/databases/mysql55-server: PLIST

   Log Message:
   Changes 5.5.53:
   Packaging Notes
   ---------------
   RPM packages now create the /var/lib/mysql-files directory, which is now the default value of the secure_file_priv system variable that specifies a directory for import and export operations.

   Security Notes
   --------------
   Incompatible Change: The secure_file_priv system variable is used to limit the effect of data import and export operations.

   Functionality Added or Changed
   ------------------------------
   yaSSL was upgraded to version 2.4.2. This upgrade corrects issues with: Potential AES side channel leaks; DSA padding for unusual sizes; the SSL_CTX_load_verify_locations() OpenSSL compatibility function failing to handle long path directory names.</content>
</entry>
<entry>
<title>Pullup ticket #5131 - requested by dholland</title>
<updated>2016-10-15T18:06:08Z</updated>
<author>
<name>bsiegert</name>
<email>bsiegert@pkgsrc.org</email>
</author>
<published>2016-10-15T18:06:08Z</published>
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<id>urn:sha1:6e4f92650a3569b34b13b26cc0eb7a6edb9ad151</id>
<content type='text'>
databases/geneweb: build fix

Revisions pulled up:
- databases/geneweb/Makefile                                    1.44

---
   Module Name:	pkgsrc
   Committed By:	dholland
   Date:		Sun Oct  9 21:25:11 UTC 2016

   Modified Files:
   	pkgsrc/databases/geneweb: Makefile

   Log Message:
   Fix install rule. Switch to user-destdir. Should retire PR 51545.
   PKGREVISION -&gt; 10 because prior packages might have unintended mode 600
   data files.</content>
</entry>
<entry>
<title>Add thread ID support on NetBSD. Fixes build.</title>
<updated>2016-09-27T09:01:59Z</updated>
<author>
<name>fhajny</name>
<email>fhajny@pkgsrc.org</email>
</author>
<published>2016-09-27T09:01:59Z</published>
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<id>urn:sha1:1eccba52231eca742cd86c08247750217837993c</id>
<content type='text'>
</content>
</entry>
<entry>
<title>Update databases/redis to 3.2.4.</title>
<updated>2016-09-26T13:35:42Z</updated>
<author>
<name>fhajny</name>
<email>fhajny@pkgsrc.org</email>
</author>
<published>2016-09-26T13:35:42Z</published>
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<id>urn:sha1:b50a20963b9d439b08f6c79dea9816d4ba377c28</id>
<content type='text'>
This is a Redis critical release in order to fix a security issue
which is documented clearly here:

https://github.com/antirez/redis/commit/6d9f8e2462fc2c426d48c941edeb78e5df7d2977

Thanks to Cory Duplantis of Cisco Talos for reporting the issue.

IMPACT:
The gist is that using CONFIG SET calls (or by manipulating
redis.conf) an attacker is able to compromise certain fields of
the "server" global structure, including the aof filename pointer,
that could be made pointing to something else. In turn the AOF
name is used in different contexts such as logging, rename(2) and
open(2) syscalls, leading to potential problems.

Please note that since having access to CONFIG SET also means to
be able to change the AOF filename (and many other things)
directly, this issue actual real world impact is quite small, so I
would not panik: if you have CONFIG SET level of access, you can
do more and more easily.

AFFECTED VERSIONS:
- All Redis 3.2.x versions are affected.

OTHER CHANGES IN THIS RELEASE:
- TCP binding bug fixed when only certain addresses were available
  for a given port.
- A much better crash report that includes part of the Redis binary:
  this will allow to fix bugs even when we just have a crash log and
  no other help from the original poster oft the issue.
- A fix for Redis Cluster redis-trib displaying of info after
  creating a new cluster.</content>
</entry>
<entry>
<title>Update to 3.2.9</title>
<updated>2016-09-26T13:28:14Z</updated>
<author>
<name>ryoon</name>
<email>ryoon@pkgsrc.org</email>
</author>
<published>2016-09-26T13:28:14Z</published>
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<id>urn:sha1:4d0d39dd8107f3ec6c66360ff6e5b309e10434c8</id>
<content type='text'>
Changelog: https://docs.mongodb.com/manual/release-notes/3.2-changelog/
3.2.9 Changelog
Security
    SERVER-17856 users on mongods should always be able to run currentOp and killOp on their own operations

Sharding
    SERVER-23958 DBConfig::_loadIfNeeded will not do a reload even in cases where a force reload is needed
    SERVER-24810 Swap movePrimary command for ShardingTest::ensurePrimaryShard
    SERVER-24842 ShardingStateRecovery::recover cleanup should not wait for replication
    SERVER-24892 "Creating first chunks failed: Data inconsistency detected amongst config servers" when using 3.2.3+ without replica set config servers
    SERVER-25029 Segmentation fault in mongos when config servers not available
    SERVER-25052 csrs_upgrade_set_shard_version.js test is racy
    SERVER-25254 Only advance config server optime in response to messages from cluster members
    SERVER-25258 Improve parsing of killOp opID in mongos

Replication
    SERVER-22136 Attach term metadata to UpdatePosition command
    SERVER-23795 master/slave looks at on-disk size on a resync
    SERVER-24630 Mongos erroneously advances config optime for writes that fail write concern
    SERVER-24933 Clean shutdown of secondaries should occur in between oplog batches, not during
    SERVER-25353 Clean shutdown should leave secondaries without the batch-in-progress flag

Query
    SERVER-24693 group7.js should deterministically check for yields
    SERVER-24761 Queries being planned with the subplanner can ignore when the PlanExecutor is killed

Storage
    SERVER-16910 sorth.js makes invalid assumption about order of results

WiredTiger
    SERVER-23659 Provide useful message when wiredTigerJournalCompressor is changed
    SERVER-24334 Support conditional files in WiredTiger builds
    WT-2711 Change statistics log configuration options
    WT-2730 cursor next/prev can return the wrong key/value pair when crossing a page boundary
    WT-2760 Fix a bug in backup related to directory sync. Change the filesystem API to make durable the default
    WT-2798 Crash vulnerability with nojournal after create during checkpoint
    WT-2802 Transaction commit causes heap-use-after free

Operations
    SERVER-20239 Built-in sampling heap profiler
    SERVER-22347 Mongo shell replica set connections must use legacy readMode
    SERVER-22383 mongo shell should permit mongodb:// URI without database name
    SERVER-23069 Improve tcmalloc freelist statistics
    SERVER-23145 Shell sharding helpers should give feedback on success
    SERVER-23409 Add tunability to tcmalloc serverStatus detail
    SERVER-23830 On RHEL7/Centos7 mongod can't stop if pid location in conf differs from the init.d script
    SERVER-24335 Shell sharding helpers should use wtimeout and respond appropriately

Build and Packaging
    SERVER-7285 Support systemd in future compatible distributions
    SERVER-19986 clang-format.py lint fails in mci if files were deleted
    SERVER-21820 Export "endian" option from SConstruct
    SERVER-21830 Import the edit "endian" option in SConscript
    SERVER-24849 Vendor SCons

Tools
    TOOLS-1336 Make -version spit out a bit more information.

Internals
    SERVER-23226 Port resmoke.py's CheckReplDBHash hook to javascript
    SERVER-23306 Check collection attributes during (js) testing
    SERVER-23661 $sample takes disproportionately long time on newly created collection
    SERVER-23902 Failing to create a thread should fail with a useful error message
    SERVER-24073 Update system perf, longevity, and distributed correctness projects to use dedicated work directory
    SERVER-24346 Run jstestfuzz on rhel55-test instead of rhel55
    SERVER-24593 virtualenv used for ese test should not use system-site-package
    SERVER-24716 Remove the CheckReplDBHashDeprecated hook
    SERVER-24758 Move initial_sync suite of tests into its own tasks in sys-perf project
    SERVER-24820 move push tasks to use relevant ec2 distro rather than rhel55
    SERVER-24919 Perf.yml should consistently call pip install in venv
    SERVER-24925 add url_raw field to resmoke
    SERVER-24946 Evergreen.yml test for storageEngineCacheSizeGB cannot use [[ ]]
    SERVER-24990 Update command_line_parsing.js to ignore cacheSizeGB in configuration comparison
    SERVER-25006 Connection Pool ASIO must indicate use separately from non-error
    SERVER-25074 make performance analysis run with log analysis
    SERVER-25146 JS replset dbhash hook fails when checking nindexes with a collection containing a background index
    SERVER-25169 for all branches earlier than master, change rhel55 compile distro to rhel55-large
    SERVER-25193 Update system_perf.yml to simplify patch builds
    SERVER-25198 Increase scons stack size for eslint
    SERVER-25199 performance project: enable time logic for log analysis
    SERVER-25212 work around stale dbhash value on v3.2
    SERVER-25259 Drop temporary databases in dbhash testing hook
    SERVER-25273 Concurrency suite dbHash check should call checkDBHashesFsyncLocked
    SERVER-25274 Make checkDBHashesFsyncLocked from jstests/hooks/check_repl_dbhash.js, an internal function
    SERVER-25302 turn on YCSB throughput analysis for YCSB tasks in sys-perf
    SERVER-25330 Update system_perf.yml to use different test_control file for replica and sharded ycsb
    TOOLS-1079 write_concern_mongos jstests are flaky
    TOOLS-1176 -dumpDbUsersAndRoles without users creates broken dumps</content>
</entry>
<entry>
<title>Added PKGNAME to conform to directory name</title>
<updated>2016-09-20T13:07:08Z</updated>
<author>
<name>jaapb</name>
<email>jaapb@pkgsrc.org</email>
</author>
<published>2016-09-20T13:07:08Z</published>
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<id>urn:sha1:8870cb1f31212df4be6a20bf604399feb3f8e266</id>
<content type='text'>
</content>
</entry>
<entry>
<title>Added ocaml-ldap to SUBDIRs</title>
<updated>2016-09-20T12:55:04Z</updated>
<author>
<name>jaapb</name>
<email>jaapb@pkgsrc.org</email>
</author>
<published>2016-09-20T12:55:04Z</published>
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<id>urn:sha1:1487e883b47de5326dbe227314ca271af5ace0d4</id>
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</content>
</entry>
<entry>
<title>New package databases/ocaml-ldap, an LDAP library for OCaml.</title>
<updated>2016-09-20T12:52:59Z</updated>
<author>
<name>jaapb</name>
<email>jaapb@pkgsrc.org</email>
</author>
<published>2016-09-20T12:52:59Z</published>
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<id>urn:sha1:c1cb6d4a358b0867766e831eb203790181b40699</id>
<content type='text'>
Ocamldap is an implementation of the Light Weight Directory Access Protocol,
and a set of useful tools built around it. It includes high level libraries for
creating ldap clients and ldap servers.

It also includes many of the auxiliary tools needed for building intelligent
solutions, and interoperating with other directories. These include, an rfc2252
schema parser, and an schema checker, an ldif parser and printer, a search
filter parser (but no printer yet), and a rudimentary ldap url parser.</content>
</entry>
<entry>
<title>Recursive PKGREVISION bump for gnutls shlib major bump.</title>
<updated>2016-09-19T13:04:18Z</updated>
<author>
<name>wiz</name>
<email>wiz@pkgsrc.org</email>
</author>
<published>2016-09-19T13:04:18Z</published>
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</content>
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