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authorjschauma <jschauma@pkgsrc.org>2003-09-26 03:52:47 +0000
committerjschauma <jschauma@pkgsrc.org>2003-09-26 03:52:47 +0000
commit20bf40599b88d4fcd6fe9a6008b34f2ddc22a9c1 (patch)
tree218097c09ee71f732d2d35ca7025d859a19f9758 /biology/Makefile
parentb94fb679874887744925d33fe0c78dcb5fa09fd9 (diff)
downloadpkgsrc-20bf40599b88d4fcd6fe9a6008b34f2ddc22a9c1.tar.gz
Initial import of hmmer, one of the many packages provided by
brook at biology dot nmsu dot edu and his team at NMSU. HMMER is an implementation of profile HMM methods for sensitive database searches using multiple sequence alignments as queries. HMMER takes multiple sequence alignement as input and builds statistical model called "Hidden Markov Model" which can be used as a query into a sequence database to find and/or align additional homologues of the sequence family.
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