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authorbacon <bacon@pkgsrc.org>2018-07-25 15:14:32 +0000
committerbacon <bacon@pkgsrc.org>2018-07-25 15:14:32 +0000
commit4964d24303a4b7b4ec372b6fde4a11b4226e791c (patch)
tree5e2be367ea2fe028c5751aa4d942a81a97e611d6 /biology/bioperl
parentbbb97402c3cf08d55799d9cb2b376bdae5154db8 (diff)
downloadpkgsrc-4964d24303a4b7b4ec372b6fde4a11b4226e791c.tar.gz
biology/trimmomatic: import Trimmomatic-0.38
Trimmomatic performs a variety of useful trimming tasks for illumina paired-end and single ended data. The selection of trimming steps and their associated parameters are supplied on the command line. It works with FASTQ (using phred + 33 or phred + 64 quality scores, depending on the Illumina pipeline used), either uncompressed or gzipp'ed FASTQ.
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