summaryrefslogtreecommitdiff
path: root/biology/gromacs
diff options
context:
space:
mode:
authorsbd <sbd@pkgsrc.org>2013-04-01 08:00:15 +0000
committersbd <sbd@pkgsrc.org>2013-04-01 08:00:15 +0000
commitb05d76315670c7a165c881cdafdf67960ddd5394 (patch)
tree4b2c17ed137d59beb597ea6d05b0226f34478723 /biology/gromacs
parenta021665ac6a6be65462be616573be34febfce124 (diff)
downloadpkgsrc-b05d76315670c7a165c881cdafdf67960ddd5394.tar.gz
Use host_alias for file paths (as it doesn't contain '-gnu').
Diffstat (limited to 'biology/gromacs')
-rw-r--r--biology/gromacs/distinfo4
-rw-r--r--biology/gromacs/patches/patch-aa33
2 files changed, 29 insertions, 8 deletions
diff --git a/biology/gromacs/distinfo b/biology/gromacs/distinfo
index d7ebbece748..fbb165bba54 100644
--- a/biology/gromacs/distinfo
+++ b/biology/gromacs/distinfo
@@ -1,9 +1,9 @@
-$NetBSD: distinfo,v 1.9 2012/01/14 00:38:18 asau Exp $
+$NetBSD: distinfo,v 1.10 2013/04/01 08:00:15 sbd Exp $
SHA1 (gromacs-4.5.5.tar.gz) = ce4b4f9a0453dd2ffea72f28ea0bc7bb7a72f479
RMD160 (gromacs-4.5.5.tar.gz) = a3d40c3ac6ec9ee3e4607bd35afca1dd4715154e
Size (gromacs-4.5.5.tar.gz) = 10398178 bytes
-SHA1 (patch-aa) = 29c6683c71989621f0f41682b1c225f524a2d84f
+SHA1 (patch-aa) = 60347ad02438d8e13c88c2267030b5793837a419
SHA1 (patch-ad) = 68b37154ba466e28cad0e539e25253c901421aaa
SHA1 (patch-ae) = 59a5e88abeee883483b557cab1681c9a9098870f
SHA1 (patch-ag) = 810d58d3ad787c9508f775674541775245402596
diff --git a/biology/gromacs/patches/patch-aa b/biology/gromacs/patches/patch-aa
index 37e72b12be1..bf40b667fb1 100644
--- a/biology/gromacs/patches/patch-aa
+++ b/biology/gromacs/patches/patch-aa
@@ -1,12 +1,30 @@
-$NetBSD: patch-aa,v 1.2 2010/09/03 20:52:39 asau Exp $
+$NetBSD: patch-aa,v 1.3 2013/04/01 08:00:16 sbd Exp $
Allow flags to contain commas.
---- share/template/Makefile.in.orig 2010-08-10 22:56:17.000000000 +0400
-+++ share/template/Makefile.in 2010-08-11 00:14:07.000000000 +0400
-@@ -569,9 +569,9 @@
+--- share/template/Makefile.in.orig 2011-09-21 12:38:30.000000000 +0000
++++ share/template/Makefile.in
+@@ -250,11 +250,11 @@ XLIBS = -lmd@LIBSUFFIX@ -lgmx@LIBSUFFIX@
+ XCC = @CC@
+ @GMX_DOUBLE_FALSE@MYCFLAGS = @CFLAGS@ @INCLUDES@ -I@includedir@
+ @GMX_DOUBLE_TRUE@MYCFLAGS = @CFLAGS@ @INCLUDES@ -I@includedir@ -DGMX_DOUBLE
+-@GMX_DOUBLE_FALSE@template_DATA = template.c README Makefile.@host@ Makefile.pkg
+-@GMX_DOUBLE_TRUE@template_DATA = template.c README Makefile.@host@_double Makefile.pkg
++@GMX_DOUBLE_FALSE@template_DATA = template.c README Makefile.@host_alias@ Makefile.pkg
++@GMX_DOUBLE_TRUE@template_DATA = template.c README Makefile.@host_alias@_double Makefile.pkg
+ EXTRA_DIST = template.c README Template.mak Makefile.pkg CMakeLists.txt.template
+ BUILT_SOURCES = gromacs
+-CLEANFILES = Makefile.@host@ Makefile.@host@_double *~ \\\#*
++CLEANFILES = Makefile.@host_alias@ Makefile.@host_alias@_double *~ \\\#*
+ template_SOURCES = template.c
+ LDADD = ../../src/mdlib/libmd@LIBSUFFIX@.la ../../src/gmxlib/libgmx@LIBSUFFIX@.la
+ all: $(BUILT_SOURCES)
+@@ -569,13 +569,13 @@ uninstall-am: uninstall-templateDATA
+ gromacs:
+ $(LN_S) $(top_srcdir)/include gromacs
- Makefile.@host@ Makefile.@host@_double: Template.mak Makefile
+-Makefile.@host@ Makefile.@host@_double: Template.mak Makefile
++Makefile.@host_alias@ Makefile.@host_alias@_double: Template.mak Makefile
cat $(srcdir)/Template.mak | \
- sed 's,@LDFLAGS\@,$(XLDFLAGS),' | \
- sed 's,@LIBS\@,$(XLIBS),' | \
@@ -15,5 +33,8 @@ Allow flags to contain commas.
+ sed 's|@LIBS\@|$(XLIBS)|' | \
+ sed 's|@CFLAGS\@|$(MYCFLAGS)|' | \
sed 's,@CC\@,$(XCC),' | \
- sed 's,@host\@,@host@,' >$@
+- sed 's,@host\@,@host@,' >$@
++ sed 's,@host\@,@host_alias@,' >$@
#template.$(OBJEXT): gromacs
+
+ clean-local: