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authorminskim <minskim@pkgsrc.org>2005-03-26 17:05:01 +0000
committerminskim <minskim@pkgsrc.org>2005-03-26 17:05:01 +0000
commit31d65d0f18425a5f233bed0b7b73cbd6bef28c69 (patch)
tree617f45bc1a288bb62c9b5faff23cec7a5b90850a /biology/lucy/PLIST
parent988044b55f03ed1f75dcc35fea500e81a11c6830 (diff)
downloadpkgsrc-31d65d0f18425a5f233bed0b7b73cbd6bef28c69.tar.gz
Import lucy from pkgsrc-wip. Packaged by David Price and modified by me.
A Sequence Cleanup Program. Lucy is a utility that prepares raw DNA sequence fragments for sequence assembly,possibly using the TIGR Assembler. The cleanup process includes quality assessment, confidence reassurance, vector trimming and vector removal. The primary advantage of Lucy over other similar utilities is that it is a fully integrated, stand alone program.
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+@comment $NetBSD: PLIST,v 1.1.1.1 2005/03/26 17:05:03 minskim Exp $
+bin/lucy
+man/man1/lucy.1.gz
+share/examples/lucy/ARMTM40TR.qul
+share/examples/lucy/ARMTM40TR.seq
+share/examples/lucy/PUC19
+share/examples/lucy/PUC19splice
+share/examples/lucy/PUC19splice.for
+share/examples/lucy/PUC19splice.rev
+share/examples/lucy/atie.2nd
+share/examples/lucy/atie.qul
+share/examples/lucy/atie.seq
+share/examples/lucy/lucy.debug
+share/examples/lucy/lucy.ps
+share/examples/lucy/pSPORT1splice
+share/examples/lucy/pSPORT1vector
+@dirrm share/examples/lucy