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authorben <ben@pkgsrc.org>2004-08-16 23:58:35 +0000
committerben <ben@pkgsrc.org>2004-08-16 23:58:35 +0000
commitee36ecf16f89cc2ea374cf69692b8630c32a6990 (patch)
treec343ade3394971eaedb3f4bb504dc6636fa499b5 /biology/phylip/Makefile
parentf7d7d0ec1ecc82842abcd9227c8e2f2c30592b69 (diff)
downloadpkgsrc-ee36ecf16f89cc2ea374cf69692b8630c32a6990.tar.gz
Update phylip to version 3.61. No ChangeLog included. However there is a
very long list of bux fixes since 3.57 at: http://evolution.genetics.washington.edu/phylip/bugs.html
Diffstat (limited to 'biology/phylip/Makefile')
-rw-r--r--biology/phylip/Makefile44
1 files changed, 26 insertions, 18 deletions
diff --git a/biology/phylip/Makefile b/biology/phylip/Makefile
index 912ba1e7415..fe1e2b0e73a 100644
--- a/biology/phylip/Makefile
+++ b/biology/phylip/Makefile
@@ -1,11 +1,8 @@
-# $NetBSD: Makefile,v 1.6 2004/01/20 12:08:40 agc Exp $
+# $NetBSD: Makefile,v 1.7 2004/08/16 23:58:35 ben Exp $
-DISTNAME= phylip
-PKGNAME= phylip-3.573c
+DISTNAME= phylip-3.61
CATEGORIES= biology
-MASTER_SITES= ftp://evolution.genetics.washington.edu/pub/phylip/ \
- ftp://ftp.bioss.sari.ac.uk/pub/phylogeny/phylip/
-EXTRACT_SUFX= .tar.Z
+MASTER_SITES= ftp://evolution.genetics.washington.edu/pub/phylip/
MAINTAINER= babafou@babafou.eu.org
HOMEPAGE= http://evolution.genetics.washington.edu/phylip.html
@@ -15,25 +12,36 @@ RESTRICTED= "No commercial distribution without a royalty agreement with the au
NO_SRC_ON_CDROM= ${RESTRICTED}
NO_BIN_ON_CDROM= ${RESTRICTED}
-WRKSRC= ${WRKDIR}
+WRKSRC= ${WRKDIR}/${DISTNAME}/src
+
+MAKE_FLAGS+= CC=${CC}
do-install:
- ${INSTALL_DATA_DIR} ${PREFIX}/share/doc/phylip
-.for DOC in main.doc \
- contchar.doc discrete.doc distance.doc draw.doc sequence.doc
- ${INSTALL_DATA} ${WRKSRC}/${DOC} ${PREFIX}/share/doc/phylip
-.endfor
.for PROGRAM in clique consense contml contrast dnacomp dnadist \
dnainvar dnaml dnamlk dnamove dnapars dnapenny \
- dolmove dollop dolpenny drawgram drawtree factor \
- fitch gendist kitsch mix move neighbor penny \
- protdist protpars restml retree seqboot
+ dolmove dollop dolpenny factor fitch gendist kitsch \
+ mix move neighbor pars penny proml promlk protdist \
+ protpars restdist restml retree seqboot treedist \
+ drawgram drawtree
${INSTALL_PROGRAM} ${WRKSRC}/${PROGRAM} ${PREFIX}/bin
- ${INSTALL_DATA} ${WRKSRC}/${PROGRAM}.doc ${PREFIX}/share/doc/phylip
.endfor
- ${INSTALL_DATA_DIR} ${PREFIX}/share/misc/phylip
+ ${INSTALL_DATA_DIR} ${PREFIX}/share/fonts/phylip
.for FONT in font1 font2 font3 font4 font5 font6
- ${INSTALL_DATA} ${WRKSRC}/${FONT} ${PREFIX}/share/misc/phylip
+ ${INSTALL_DATA} ${WRKSRC}/${FONT} ${PREFIX}/share/fonts/phylip
+.endfor
+ ${INSTALL_DATA_DIR} ${PREFIX}/share/doc/html/phylip
+.for HTML in clique.html consense.html contchar.html contml.html \
+ contrast.html discrete.html distance.html dnacomp.html \
+ dnadist.html dnainvar.html dnaml.html dnamlk.html \
+ dnamove.html dnapars.html dnapenny.html dollop.html \
+ dolmove.html dolpenny.html draw.html drawgram.html \
+ drawtree.html factor.html fitch.html gendist.html \
+ kitsch.html main.html mix.html move.html neighbor.html \
+ pars.html penny.html phylip.gif phylip.html proml.html \
+ promlk.html protdist.html protpars.html restdist.html \
+ restml.html retree.html seqboot.html sequence.html \
+ treedist.html
+ ${INSTALL_DATA} ${WRKDIR}/${DISTNAME}/doc/${HTML} ${PREFIX}/share/doc/html/phylip
.endfor
.include "../../mk/bsd.pkg.mk"