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authorasau <asau@pkgsrc.org>2012-09-14 17:46:23 +0000
committerasau <asau@pkgsrc.org>2012-09-14 17:46:23 +0000
commit4a393e76dd497a816f17f8e1421aacb28ea1ae28 (patch)
treef7075a3661029a1d431531bdf4229e03de97e20b /biology/plink/DESCR
parente671549e23688c69865f9445a14212abdb357e72 (diff)
downloadpkgsrc-4a393e76dd497a816f17f8e1421aacb28ea1ae28.tar.gz
Import PLINK 1.07 as biology/plink
From Jason Bacon via pkgsrc-wip. PLINK is a free, open-source whole genome association analysis toolset, designed to perform a range of basic, large-scale analyses in a computationally efficient manner. The focus of PLINK is purely on analysis of genotype/phenotype data, so there is no support for steps prior to this (e.g. study design and planning, generating genotype or CNV calls from raw data). Through integration with gPLINK and Haploview, there is some support for the subsequent visualization, annotation and storage of results.
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+PLINK is a free, open-source whole genome association analysis
+toolset, designed to perform a range of basic, large-scale
+analyses in a computationally efficient manner.
+
+The focus of PLINK is purely on analysis of genotype/phenotype
+data, so there is no support for steps prior to this (e.g. study
+design and planning, generating genotype or CNV calls from raw
+data). Through integration with gPLINK and Haploview, there is
+some support for the subsequent visualization, annotation and
+storage of results.