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authorrillig <rillig@pkgsrc.org>2005-12-05 20:49:47 +0000
committerrillig <rillig@pkgsrc.org>2005-12-05 20:49:47 +0000
commitb71a1d488b6b45e0a968a4c149990c25b6a09215 (patch)
treedac5b1dd14794d86b061d26b9503adb2552ed3f8 /biology
parent624eed58928f83676fbd7ca01a5f6974bb2cce2a (diff)
downloadpkgsrc-b71a1d488b6b45e0a968a4c149990c25b6a09215.tar.gz
Fixed pkglint warnings. The warnings are mostly quoting issues, for
example MAKE_ENV+=FOO=${BAR} is changed to MAKE_ENV+=FOO=${BAR:Q}. Some other changes are outlined in http://mail-index.netbsd.org/tech-pkg/2005/12/02/0034.html
Diffstat (limited to 'biology')
-rw-r--r--biology/clustalw/Makefile4
-rw-r--r--biology/hmmer/Makefile4
-rw-r--r--biology/mummer/Makefile6
-rw-r--r--biology/rasmol/Makefile10
4 files changed, 12 insertions, 12 deletions
diff --git a/biology/clustalw/Makefile b/biology/clustalw/Makefile
index a9142313149..3700ef71ec6 100644
--- a/biology/clustalw/Makefile
+++ b/biology/clustalw/Makefile
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.7 2005/04/19 15:42:49 minskim Exp $
+# $NetBSD: Makefile,v 1.8 2005/12/05 20:49:51 rillig Exp $
DISTNAME= clustalw1.83.UNIX
PKGNAME= clustalw-1.83
@@ -16,7 +16,7 @@ MAKEFILE= makefile
BUILD_TARGET= clustalw
WRKSRC= ${WRKDIR}/clustalw1.83
-MAKE_FLAGS+= CC="${CC}"
+MAKE_FLAGS+= CC=${CC:Q}
INSTALLATION_DIRS= bin
diff --git a/biology/hmmer/Makefile b/biology/hmmer/Makefile
index 04ae3199ad9..f159ded3fb8 100644
--- a/biology/hmmer/Makefile
+++ b/biology/hmmer/Makefile
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.7 2005/04/11 21:45:01 tv Exp $
+# $NetBSD: Makefile,v 1.8 2005/12/05 20:49:51 rillig Exp $
#
DISTNAME= hmmer-2.3.2
@@ -13,6 +13,6 @@ PKG_INSTALLATION_TYPES= overwrite pkgviews
GNU_CONFIGURE= yes
-MAKE_FLAGS+= MKDIR="${MKDIR}"
+MAKE_FLAGS+= MKDIR=${MKDIR:Q}
.include "../../mk/bsd.pkg.mk"
diff --git a/biology/mummer/Makefile b/biology/mummer/Makefile
index 48c8c9b814b..4f81b15684b 100644
--- a/biology/mummer/Makefile
+++ b/biology/mummer/Makefile
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.9 2005/07/16 19:10:38 jlam Exp $
+# $NetBSD: Makefile,v 1.10 2005/12/05 20:49:51 rillig Exp $
#
DISTNAME= MUMmer3.15
@@ -14,8 +14,8 @@ COMMENT= System for aligning whole genome sequences
WRKSRC= ${WRKDIR}/${DISTNAME}
USE_TOOLS+= gmake perl:run
-MAKE_ENV+= SH="${SH}"
-MAKE_ENV+= PERL="${PERL5}"
+MAKE_ENV+= SH=${SH:Q}
+MAKE_ENV+= PERL=${PERL5:Q}
INSTALLATION_DIRS= bin
do-install:
diff --git a/biology/rasmol/Makefile b/biology/rasmol/Makefile
index e89955571ee..d320b93881a 100644
--- a/biology/rasmol/Makefile
+++ b/biology/rasmol/Makefile
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.24 2005/10/31 17:53:26 tv Exp $
+# $NetBSD: Makefile,v 1.25 2005/12/05 20:49:51 rillig Exp $
DISTNAME= RasMol_2.7.3
PKGNAME= rasmol-2.7.3
@@ -13,7 +13,7 @@ WRKSRC= ${WRKDIR}/${DISTNAME}/src
USE_IMAKE= YES
USE_TOOLS+= gunzip
-MAKE_ENV+= DEPTHDEF="${DEPTHDEF}"
+MAKE_ENV+= DEPTHDEF=${DEPTHDEF:Q}
.include "../../mk/bsd.prefs.mk"
@@ -22,11 +22,11 @@ GCC_REQD+= 2.95.3
.endif
.if defined(RASMOL_DEPTH)
-.if ${RASMOL_DEPTH} == 32
+. if ${RASMOL_DEPTH} == 32
DEPTHDEF= -DTHIRTYTWOBIT
-.else if ${RASMOL_DEPTH} == 16
+. elif ${RASMOL_DEPTH} == 16
DEPTHDEF= -DSIXTEENBIT
-.endif
+. endif
.endif
DEPTHDEF?= -DEIGHTBIT