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authorjschauma <jschauma@pkgsrc.org>2003-09-27 23:36:34 +0000
committerjschauma <jschauma@pkgsrc.org>2003-09-27 23:36:34 +0000
commita328110a9560223b658aa2c2ef8817d860bb466a (patch)
treeab7d36df16e01a40553a4a5b0c41918b7d88995b /biology
parentba502654af7ec2535a86f7b559cb4814fefd0cd4 (diff)
downloadpkgsrc-a328110a9560223b658aa2c2ef8817d860bb466a.tar.gz
Initial import of sewer, one of the many packages provided by
brook at biology dot nmsu dot edu and his team at NMSU. SeWeR is SEquence Analysis using WEb Resources. It has web based Sequence Analysis. SeWeR is an integrated portal to common web-based services in bioinformatics.
Diffstat (limited to 'biology')
-rw-r--r--biology/sewer/DESCR3
-rw-r--r--biology/sewer/MESSAGE7
-rw-r--r--biology/sewer/Makefile30
-rw-r--r--biology/sewer/PLIST72
-rw-r--r--biology/sewer/distinfo4
5 files changed, 116 insertions, 0 deletions
diff --git a/biology/sewer/DESCR b/biology/sewer/DESCR
new file mode 100644
index 00000000000..15b9367ad7a
--- /dev/null
+++ b/biology/sewer/DESCR
@@ -0,0 +1,3 @@
+SeWeR is SEquence Analysis using WEb Resources. It has web based Sequence
+Analysis. SeWeR is an integrated portal to common web-based services in
+bioinformatics.
diff --git a/biology/sewer/MESSAGE b/biology/sewer/MESSAGE
new file mode 100644
index 00000000000..53ba9df3176
--- /dev/null
+++ b/biology/sewer/MESSAGE
@@ -0,0 +1,7 @@
+===========================================================================
+$NetBSD: MESSAGE,v 1.1.1.1 2003/09/27 23:36:34 jschauma Exp $
+
+The index.html page for SeWeR is located at:
+ ${PREFIX}/share/doc/html/sewer/
+
+===========================================================================
diff --git a/biology/sewer/Makefile b/biology/sewer/Makefile
new file mode 100644
index 00000000000..fc3b97736bc
--- /dev/null
+++ b/biology/sewer/Makefile
@@ -0,0 +1,30 @@
+# $NetBSD: Makefile,v 1.1.1.1 2003/09/27 23:36:34 jschauma Exp $
+
+DISTNAME= sewer
+PKGNAME= sewer-2.6
+WRKSRC= ${WRKDIR}
+CATEGORIES= biology
+MASTER_SITES= ftp://iubio.bio.indiana.edu/molbio/analyze/
+EXTRACT_SUFX= .zip
+
+MAINTAINER= hdp@cs.nmsu.edu
+HOMEPAGE= http://iubio.bio.indiana.edu/webapps/SeWeR/
+COMMENT= SEquence Analysis using WEb Resources
+
+NO_CONFIGURE= YES
+NO_BUILD= YES
+
+USE_BUILDLINK2= YES
+
+pre-install:
+.for goner in readme.txt* cvs styles/cvs scripts/cvs
+ ${RM} -fr ${WRKDIR}/${goner}
+.endfor
+
+do-install:
+ ${INSTALL_DATA_DIR} ${PREFIX}/share/doc/html/sewer
+ cd ${WRKDIR} && ${PAX} -rw . ${PREFIX}/share/doc/html/sewer/
+ cd ${PREFIX}/share/doc/html/sewer && ${LN} -s sewer.htm index.html
+
+.include "../../mk/bsd.pkg.mk"
+
diff --git a/biology/sewer/PLIST b/biology/sewer/PLIST
new file mode 100644
index 00000000000..8bdda6a408f
--- /dev/null
+++ b/biology/sewer/PLIST
@@ -0,0 +1,72 @@
+@comment $NetBSD: PLIST,v 1.1.1.1 2003/09/27 23:36:34 jschauma Exp $
+share/doc/html/sewer/index.html
+share/doc/html/sewer/align.htm
+share/doc/html/sewer/bookmarklet.htm
+share/doc/html/sewer/copyright.htm
+share/doc/html/sewer/custom.htm
+share/doc/html/sewer/customresult.htm
+share/doc/html/sewer/database.htm
+share/doc/html/sewer/home.htm
+share/doc/html/sewer/images/align.png
+share/doc/html/sewer/images/align1.png
+share/doc/html/sewer/images/alignment.png
+share/doc/html/sewer/images/arrow_red.png
+share/doc/html/sewer/images/bookmarkhead.png
+share/doc/html/sewer/images/bookmarklet.png
+share/doc/html/sewer/images/bookmarklet1.png
+share/doc/html/sewer/images/clear.png
+share/doc/html/sewer/images/custom.png
+share/doc/html/sewer/images/custom1.png
+share/doc/html/sewer/images/customize.png
+share/doc/html/sewer/images/database.png
+share/doc/html/sewer/images/database1.png
+share/doc/html/sewer/images/databasearch.png
+share/doc/html/sewer/images/dnaseqana.png
+share/doc/html/sewer/images/download.png
+share/doc/html/sewer/images/help.png
+share/doc/html/sewer/images/home.png
+share/doc/html/sewer/images/home1.png
+share/doc/html/sewer/images/mirror_header.png
+share/doc/html/sewer/images/mirrors.png
+share/doc/html/sewer/images/more_grey.png
+share/doc/html/sewer/images/nucacidhead.png
+share/doc/html/sewer/images/nucleic.png
+share/doc/html/sewer/images/nucleic1.png
+share/doc/html/sewer/images/optionoff.png
+share/doc/html/sewer/images/optionon.png
+share/doc/html/sewer/images/pcr.png
+share/doc/html/sewer/images/pcr1.png
+share/doc/html/sewer/images/pcrandrelated.png
+share/doc/html/sewer/images/progselect.png
+share/doc/html/sewer/images/protein.png
+share/doc/html/sewer/images/protein1.png
+share/doc/html/sewer/images/proteinhead.png
+share/doc/html/sewer/images/query.png
+share/doc/html/sewer/images/question.png
+share/doc/html/sewer/images/redear.png
+share/doc/html/sewer/images/savvylogosmall.png
+share/doc/html/sewer/images/selectall.png
+share/doc/html/sewer/images/sewer_logo_small.png
+share/doc/html/sewer/images/sewergraphics.png
+share/doc/html/sewer/images/submit.png
+share/doc/html/sewer/images/tools.png
+share/doc/html/sewer/images/tools1.png
+share/doc/html/sewer/images/toolshead.png
+share/doc/html/sewer/mirror.htm
+share/doc/html/sewer/nav.htm
+share/doc/html/sewer/nucleicacid.htm
+share/doc/html/sewer/pcr.htm
+share/doc/html/sewer/protein.htm
+share/doc/html/sewer/scripts/browser.js
+share/doc/html/sewer/scripts/sewer.js
+share/doc/html/sewer/sewer.htm
+share/doc/html/sewer/sewer_tools.htm
+share/doc/html/sewer/styles/mac.css
+share/doc/html/sewer/styles/unix.css
+share/doc/html/sewer/styles/winie.css
+share/doc/html/sewer/styles/winns.css
+share/doc/html/sewer/tools.htm
+@dirrm share/doc/html/sewer/styles
+@dirrm share/doc/html/sewer/scripts
+@dirrm share/doc/html/sewer/images
+@dirrm share/doc/html/sewer
diff --git a/biology/sewer/distinfo b/biology/sewer/distinfo
new file mode 100644
index 00000000000..47d24e24212
--- /dev/null
+++ b/biology/sewer/distinfo
@@ -0,0 +1,4 @@
+$NetBSD: distinfo,v 1.1.1.1 2003/09/27 23:36:34 jschauma Exp $
+
+SHA1 (sewer.zip) = cd5ab1417a453412c556ae895d8f56e452b97a52
+Size (sewer.zip) = 126601 bytes