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authorwiz <wiz@pkgsrc.org>2013-05-31 12:39:35 +0000
committerwiz <wiz@pkgsrc.org>2013-05-31 12:39:35 +0000
commitedfa5f0df928c6333aa56b3c1f6e94ec796d0457 (patch)
tree57ca2acf33387d98eee9e957997e59ad73e793fb /biology
parent48cf1b525b069c5707364a1155851ce8a537c213 (diff)
downloadpkgsrc-edfa5f0df928c6333aa56b3c1f6e94ec796d0457.tar.gz
Bump all packages for perl-5.18, that
a) refer 'perl' in their Makefile, or b) have a directory name of p5-*, or c) have any dependency on any p5-* package Like last time, where this caused no complaints.
Diffstat (limited to 'biology')
-rw-r--r--biology/bioperl/Makefile4
-rw-r--r--biology/bodr/Makefile4
-rw-r--r--biology/gnome-chemistry-utils/Makefile4
-rw-r--r--biology/gromacs/Makefile4
-rw-r--r--biology/mpqc/Makefile3
-rw-r--r--biology/mummer/Makefile4
6 files changed, 12 insertions, 11 deletions
diff --git a/biology/bioperl/Makefile b/biology/bioperl/Makefile
index eda4f77711c..04ea1a136aa 100644
--- a/biology/bioperl/Makefile
+++ b/biology/bioperl/Makefile
@@ -1,8 +1,8 @@
-# $NetBSD: Makefile,v 1.23 2012/10/03 21:53:59 wiz Exp $
+# $NetBSD: Makefile,v 1.24 2013/05/31 12:39:38 wiz Exp $
#
DISTNAME= bioperl-0.7.0
-PKGREVISION= 6
+PKGREVISION= 7
CATEGORIES= biology
MASTER_SITES= http://bioperl.org/DIST/old_releases/
diff --git a/biology/bodr/Makefile b/biology/bodr/Makefile
index c1ca3d77177..e6bccfdfe67 100644
--- a/biology/bodr/Makefile
+++ b/biology/bodr/Makefile
@@ -1,8 +1,8 @@
-# $NetBSD: Makefile,v 1.4 2012/10/03 21:53:59 wiz Exp $
+# $NetBSD: Makefile,v 1.5 2013/05/31 12:39:38 wiz Exp $
#
DISTNAME= bodr-9
-PKGREVISION= 2
+PKGREVISION= 3
CATEGORIES= biology
MASTER_SITES= ${MASTER_SITE_SOURCEFORGE:=bodr/}
diff --git a/biology/gnome-chemistry-utils/Makefile b/biology/gnome-chemistry-utils/Makefile
index c036df9ecf0..437053f06d5 100644
--- a/biology/gnome-chemistry-utils/Makefile
+++ b/biology/gnome-chemistry-utils/Makefile
@@ -1,8 +1,8 @@
-# $NetBSD: Makefile,v 1.19 2013/05/09 13:45:44 joerg Exp $
+# $NetBSD: Makefile,v 1.20 2013/05/31 12:39:39 wiz Exp $
#
DISTNAME= gnome-chemistry-utils-0.12.13
-PKGREVISION= 8
+PKGREVISION= 9
CATEGORIES= biology
MASTER_SITES= http://download-mirror.savannah.gnu.org/releases/gchemutils/0.12/
EXTRACT_SUFX= .tar.bz2
diff --git a/biology/gromacs/Makefile b/biology/gromacs/Makefile
index 77d7750a7f3..1c7a5bbad51 100644
--- a/biology/gromacs/Makefile
+++ b/biology/gromacs/Makefile
@@ -1,8 +1,8 @@
-# $NetBSD: Makefile,v 1.12 2013/04/01 08:01:29 sbd Exp $
+# $NetBSD: Makefile,v 1.13 2013/05/31 12:39:39 wiz Exp $
#
DISTNAME= gromacs-4.5.5
-PKGREVISION= 2
+PKGREVISION= 3
CATEGORIES= biology
MASTER_SITES= ftp://ftp.gromacs.org/pub/gromacs/
diff --git a/biology/mpqc/Makefile b/biology/mpqc/Makefile
index 8c88693aebe..73159c898a2 100644
--- a/biology/mpqc/Makefile
+++ b/biology/mpqc/Makefile
@@ -1,6 +1,7 @@
-# $NetBSD: Makefile,v 1.5 2013/04/06 14:09:32 rodent Exp $
+# $NetBSD: Makefile,v 1.6 2013/05/31 12:39:39 wiz Exp $
DISTNAME= mpqc-2.3.1
+PKGREVISION= 1
CATEGORIES= biology
MASTER_SITES= ${MASTER_SITE_SOURCEFORGE:=mpqc/}
EXTRACT_SUFX= .tar.bz2
diff --git a/biology/mummer/Makefile b/biology/mummer/Makefile
index cb567179113..e3b3460ab8b 100644
--- a/biology/mummer/Makefile
+++ b/biology/mummer/Makefile
@@ -1,9 +1,9 @@
-# $NetBSD: Makefile,v 1.20 2012/10/03 21:53:59 wiz Exp $
+# $NetBSD: Makefile,v 1.21 2013/05/31 12:39:39 wiz Exp $
#
DISTNAME= MUMmer3.20
PKGNAME= mummer-3.20
-PKGREVISION= 1
+PKGREVISION= 2
CATEGORIES= biology
MASTER_SITES= ${MASTER_SITE_SOURCEFORGE:=mummer/}