diff options
| author | bacon <bacon@pkgsrc.org> | 2018-04-27 20:28:28 +0000 |
|---|---|---|
| committer | bacon <bacon@pkgsrc.org> | 2018-04-27 20:28:28 +0000 |
| commit | 4436c97e25b445b4e4c292fa2205998550c60704 (patch) | |
| tree | 6d734ade43f295315618ef74eaaf48479a48a0bc /biology | |
| parent | ceaa2e8ea0e6a2f7fd597ebca53c772c8ca3f115 (diff) | |
| download | pkgsrc-4436c97e25b445b4e4c292fa2205998550c60704.tar.gz | |
biology/ncbi-blast+: import ncbi-blast+-2.7.1
The Basic Local Alignment Search Tool (BLAST) finds regions of local similarity
between sequences. The program compares nucleotide or protein sequences to
sequence databases and calculates the statistical significance of matches.
BLAST can be used to infer functional and evolutionary relationships between
sequences as well as help identify members of gene families.
OK wiz@
Diffstat (limited to 'biology')
| -rw-r--r-- | biology/ncbi-blast+/DESCR | 5 | ||||
| -rw-r--r-- | biology/ncbi-blast+/Makefile | 68 | ||||
| -rw-r--r-- | biology/ncbi-blast+/PLIST | 4113 | ||||
| -rw-r--r-- | biology/ncbi-blast+/buildlink3.mk | 13 | ||||
| -rw-r--r-- | biology/ncbi-blast+/distinfo | 12 | ||||
| -rw-r--r-- | biology/ncbi-blast+/patches/patch-compilers_xcode30__prj_configure | 15 | ||||
| -rw-r--r-- | biology/ncbi-blast+/patches/patch-src_algo_blast_core_blast__kappa.c | 31 | ||||
| -rw-r--r-- | biology/ncbi-blast+/patches/patch-src_build-system_Makefile.in.top | 41 | ||||
| -rw-r--r-- | biology/ncbi-blast+/patches/patch-src_build-system_cmake_cmake-configure | 15 | ||||
| -rw-r--r-- | biology/ncbi-blast+/patches/patch-src_build-system_configure | 15 | ||||
| -rw-r--r-- | biology/ncbi-blast+/patches/patch-src_build-system_helpers_Makefile.run__with__lock.app | 20 |
11 files changed, 4348 insertions, 0 deletions
diff --git a/biology/ncbi-blast+/DESCR b/biology/ncbi-blast+/DESCR new file mode 100644 index 00000000000..0d7c1d401be --- /dev/null +++ b/biology/ncbi-blast+/DESCR @@ -0,0 +1,5 @@ +The Basic Local Alignment Search Tool (BLAST) finds regions of local similarity +between sequences. The program compares nucleotide or protein sequences to +sequence databases and calculates the statistical significance of matches. +BLAST can be used to infer functional and evolutionary relationships between +sequences as well as help identify members of gene families. diff --git a/biology/ncbi-blast+/Makefile b/biology/ncbi-blast+/Makefile new file mode 100644 index 00000000000..bb84df1728c --- /dev/null +++ b/biology/ncbi-blast+/Makefile @@ -0,0 +1,68 @@ +# $NetBSD: Makefile,v 1.1 2018/04/27 20:28:28 bacon Exp $ + +DISTNAME= ncbi-blast-${PV}+-src +PKGNAME= ncbi-blast+-${PV} +CATEGORIES= biology +MASTER_SITES= https://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/LATEST/ \ + https://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/${PV}/ + +MAINTAINER= bacon@NetBSD.org +HOMEPAGE= http://blast.ncbi.nlm.nih.gov/ +COMMENT= NCBI implementation of Basic Local Alignment Search Tool +LICENSE= public-domain + +# Fix "undefined _ThreadRuneLocale" error on FreeBSD 10.0 +# Fix "unknown options" in configure +SUBST_CLASSES+= configure +SUBST_STAGE.configure= post-patch +SUBST_SED.configure+= -e 's|-D_THREAD_SAFE|-D_THREAD_SAFE -D__RUNETYPE_INTERNAL|' +SUBST_SED.configure+= -e '/--infodir=DIR/d' +SUBST_SED.configure+= -e '/--mandir=DIR/d' +SUBST_FILES.configure+= ${WRKSRC}/src/build-system/configure + +USE_TOOLS+= gmake +USE_LANGUAGES= c c++ +GNU_CONFIGURE= yes +# REPLACE_BASH= compilers/xcode30_prj/configure +REPLACE_PERL= src/app/blast/legacy_blast.pl src/app/blast/update_blastdb.pl +REPLACE_PYTHON= src/app/winmasker/windowmasker_2.2.22_adapter.py + +# The test for amq can hang, but amq is not needed so just avoid the test +# configure chooses /usr/local/bin/ar with no flags +# Resolve a conflict with libproj by moving libs to a subdir +CONFIGURE_ENV= ncbi_cv_prog_amq_w=no +CONFIGURE_ARGS+= AR="ar cr" --without-boost +CONFIGURE_ARGS+= --libdir=${PREFIX}/lib/ncbi-tools++ +# MAKE_JOBS_SAFE= no # Intermittent issues +WRKSRC= ${WRKDIR}/${DISTNAME}/c++ + +.include "../../mk/bsd.prefs.mk" + +.if ${OPSYS} == NetBSD +# statfs is deprecated on NetBSD, but still exists in libc +# configure checks only for undefined reference, not for usability +CONFIGURE_ENV+= ac_cv_func_statfs=no +.endif + +PV= 2.7.1 + +post-install: + ${RM} ${DESTDIR}${PREFIX}/include/ncbi-tools++/*/*/.cvsignore.extra + ${STRIP} ${DESTDIR}${PREFIX}/lib/ncbi-tools++/*.so + +.include "../../devel/zlib/buildlink3.mk" +.include "../../archivers/lzo/buildlink3.mk" +.include "../../archivers/bzip2/buildlink3.mk" +.include "../../devel/pcre/buildlink3.mk" +.include "../../databases/lmdb/buildlink3.mk" +.include "../../security/gnutls/buildlink3.mk" +.include "../../devel/gmp/buildlink3.mk" +.include "../../devel/libidn2/buildlink3.mk" +.include "../../security/nettle/buildlink3.mk" +.include "../../security/libtasn1/buildlink3.mk" +.include "../../security/p11-kit/buildlink3.mk" +.include "../../security/libgcrypt/buildlink3.mk" +.include "../../databases/sqlite3/buildlink3.mk" +.include "../../security/libgpg-error/buildlink3.mk" +.include "../../lang/python/application.mk" +.include "../../mk/bsd.pkg.mk" diff --git a/biology/ncbi-blast+/PLIST b/biology/ncbi-blast+/PLIST new file mode 100644 index 00000000000..3d4dd3c2824 --- /dev/null +++ b/biology/ncbi-blast+/PLIST @@ -0,0 +1,4113 @@ +@comment $NetBSD: PLIST,v 1.1 2018/04/27 20:28:28 bacon Exp $ +bin/blast_formatter +bin/blastdb_aliastool +bin/blastdbcheck +bin/blastdbcmd +bin/blastdbcp +bin/blastn +bin/blastp +bin/blastx +bin/convert2blastmask +bin/datatool +bin/deltablast +bin/dustmasker +bin/gc_cli +bin/gene_info_reader +bin/legacy_blast.pl +bin/makeblastdb +bin/makembindex +bin/makeprofiledb +bin/project_tree_builder +bin/psiblast +bin/rpsblast +bin/rpstblastn +bin/run_with_lock +bin/seedtop +bin/segmasker +bin/seqdb_demo +bin/seqdb_perf +bin/tblastn +bin/tblastx +bin/update_blastdb.pl +bin/windowmasker +bin/windowmasker_2.2.22_adapter.py +include/ncbi-tools++/algo/blast/api/bl2seq.hpp +include/ncbi-tools++/algo/blast/api/blast_advprot_options.hpp +include/ncbi-tools++/algo/blast/api/blast_aux.hpp +include/ncbi-tools++/algo/blast/api/blast_dbindex.hpp +include/ncbi-tools++/algo/blast/api/blast_exception.hpp +include/ncbi-tools++/algo/blast/api/blast_mtlock.hpp +include/ncbi-tools++/algo/blast/api/blast_nucl_options.hpp +include/ncbi-tools++/algo/blast/api/blast_options.hpp +include/ncbi-tools++/algo/blast/api/blast_options_builder.hpp +include/ncbi-tools++/algo/blast/api/blast_options_handle.hpp +include/ncbi-tools++/algo/blast/api/blast_prot_options.hpp +include/ncbi-tools++/algo/blast/api/blast_results.hpp +include/ncbi-tools++/algo/blast/api/blast_rps_options.hpp +include/ncbi-tools++/algo/blast/api/blast_seqinfosrc.hpp +include/ncbi-tools++/algo/blast/api/blast_seqinfosrc_aux.hpp +include/ncbi-tools++/algo/blast/api/blast_types.hpp +include/ncbi-tools++/algo/blast/api/blastp_kmer_options.hpp +include/ncbi-tools++/algo/blast/api/blastx_options.hpp +include/ncbi-tools++/algo/blast/api/cdd_pssm_input.hpp +include/ncbi-tools++/algo/blast/api/deltablast.hpp +include/ncbi-tools++/algo/blast/api/deltablast_options.hpp +include/ncbi-tools++/algo/blast/api/disc_nucl_options.hpp +include/ncbi-tools++/algo/blast/api/effsearchspace_calc.hpp +include/ncbi-tools++/algo/blast/api/hspstream_queue.hpp +include/ncbi-tools++/algo/blast/api/local_blast.hpp +include/ncbi-tools++/algo/blast/api/local_db_adapter.hpp +include/ncbi-tools++/algo/blast/api/local_search.hpp +include/ncbi-tools++/algo/blast/api/magicblast.hpp +include/ncbi-tools++/algo/blast/api/magicblast_options.hpp +include/ncbi-tools++/algo/blast/api/msa_pssm_input.hpp +include/ncbi-tools++/algo/blast/api/objmgr_query_data.hpp +include/ncbi-tools++/algo/blast/api/objmgrfree_query_data.hpp +include/ncbi-tools++/algo/blast/api/phiblast_nucl_options.hpp +include/ncbi-tools++/algo/blast/api/phiblast_prot_options.hpp +include/ncbi-tools++/algo/blast/api/prelim_stage.hpp +include/ncbi-tools++/algo/blast/api/psi_pssm_input.hpp +include/ncbi-tools++/algo/blast/api/psibl2seq.hpp +include/ncbi-tools++/algo/blast/api/psiblast.hpp +include/ncbi-tools++/algo/blast/api/psiblast_iteration.hpp +include/ncbi-tools++/algo/blast/api/psiblast_options.hpp +include/ncbi-tools++/algo/blast/api/pssm_engine.hpp +include/ncbi-tools++/algo/blast/api/pssm_input.hpp +include/ncbi-tools++/algo/blast/api/query_data.hpp +include/ncbi-tools++/algo/blast/api/remote_blast.hpp +include/ncbi-tools++/algo/blast/api/remote_search.hpp +include/ncbi-tools++/algo/blast/api/repeats_filter.hpp +include/ncbi-tools++/algo/blast/api/rps_aux.hpp +include/ncbi-tools++/algo/blast/api/rpsblast_local.hpp +include/ncbi-tools++/algo/blast/api/rpstblastn_options.hpp +include/ncbi-tools++/algo/blast/api/search_strategy.hpp +include/ncbi-tools++/algo/blast/api/seedtop.hpp +include/ncbi-tools++/algo/blast/api/seqinfosrc_seqdb.hpp +include/ncbi-tools++/algo/blast/api/seqinfosrc_seqvec.hpp +include/ncbi-tools++/algo/blast/api/seqsrc_multiseq.hpp +include/ncbi-tools++/algo/blast/api/seqsrc_seqdb.hpp +include/ncbi-tools++/algo/blast/api/setup_factory.hpp +include/ncbi-tools++/algo/blast/api/sseqloc.hpp +include/ncbi-tools++/algo/blast/api/subj_ranges_set.hpp +include/ncbi-tools++/algo/blast/api/tblastn_options.hpp +include/ncbi-tools++/algo/blast/api/tblastx_options.hpp +include/ncbi-tools++/algo/blast/api/traceback_stage.hpp +include/ncbi-tools++/algo/blast/api/uniform_search.hpp +include/ncbi-tools++/algo/blast/api/version.hpp +include/ncbi-tools++/algo/blast/api/windowmask_filter.hpp +include/ncbi-tools++/algo/blast/blastinput/blast_args.hpp +include/ncbi-tools++/algo/blast/blastinput/blast_asn1_input.hpp +include/ncbi-tools++/algo/blast/blastinput/blast_fasta_input.hpp +include/ncbi-tools++/algo/blast/blastinput/blast_input.hpp +include/ncbi-tools++/algo/blast/blastinput/blast_input_aux.hpp +include/ncbi-tools++/algo/blast/blastinput/blast_scope_src.hpp +include/ncbi-tools++/algo/blast/blastinput/blastn_args.hpp +include/ncbi-tools++/algo/blast/blastinput/blastp_args.hpp +include/ncbi-tools++/algo/blast/blastinput/blastx_args.hpp +include/ncbi-tools++/algo/blast/blastinput/cmdline_flags.hpp +include/ncbi-tools++/algo/blast/blastinput/deltablast_args.hpp +include/ncbi-tools++/algo/blast/blastinput/igblastn_args.hpp +include/ncbi-tools++/algo/blast/blastinput/igblastp_args.hpp +include/ncbi-tools++/algo/blast/blastinput/kblastp_args.hpp +include/ncbi-tools++/algo/blast/blastinput/magicblast_args.hpp +include/ncbi-tools++/algo/blast/blastinput/psiblast_args.hpp +include/ncbi-tools++/algo/blast/blastinput/rmblastn_args.hpp +include/ncbi-tools++/algo/blast/blastinput/rpsblast_args.hpp +include/ncbi-tools++/algo/blast/blastinput/rpstblastn_args.hpp +include/ncbi-tools++/algo/blast/blastinput/tblastn_args.hpp +include/ncbi-tools++/algo/blast/blastinput/tblastx_args.hpp +include/ncbi-tools++/algo/blast/composition_adjustment/compo_heap.h +include/ncbi-tools++/algo/blast/composition_adjustment/compo_mode_condition.h +include/ncbi-tools++/algo/blast/composition_adjustment/composition_adjustment.h +include/ncbi-tools++/algo/blast/composition_adjustment/composition_constants.h +include/ncbi-tools++/algo/blast/composition_adjustment/matrix_frequency_data.h +include/ncbi-tools++/algo/blast/composition_adjustment/nlm_linear_algebra.h +include/ncbi-tools++/algo/blast/composition_adjustment/optimize_target_freq.h +include/ncbi-tools++/algo/blast/composition_adjustment/redo_alignment.h +include/ncbi-tools++/algo/blast/composition_adjustment/smith_waterman.h +include/ncbi-tools++/algo/blast/composition_adjustment/unified_pvalues.h +include/ncbi-tools++/algo/blast/core/aa_ungapped.h +include/ncbi-tools++/algo/blast/core/blast_aalookup.h +include/ncbi-tools++/algo/blast/core/blast_aascan.h +include/ncbi-tools++/algo/blast/core/blast_def.h +include/ncbi-tools++/algo/blast/core/blast_diagnostics.h +include/ncbi-tools++/algo/blast/core/blast_encoding.h +include/ncbi-tools++/algo/blast/core/blast_engine.h +include/ncbi-tools++/algo/blast/core/blast_export.h +include/ncbi-tools++/algo/blast/core/blast_extend.h +include/ncbi-tools++/algo/blast/core/blast_filter.h +include/ncbi-tools++/algo/blast/core/blast_gapalign.h +include/ncbi-tools++/algo/blast/core/blast_hits.h +include/ncbi-tools++/algo/blast/core/blast_hspfilter.h +include/ncbi-tools++/algo/blast/core/blast_hspstream.h +include/ncbi-tools++/algo/blast/core/blast_kappa.h +include/ncbi-tools++/algo/blast/core/blast_lookup.h +include/ncbi-tools++/algo/blast/core/blast_message.h +include/ncbi-tools++/algo/blast/core/blast_nalookup.h +include/ncbi-tools++/algo/blast/core/blast_nascan.h +include/ncbi-tools++/algo/blast/core/blast_options.h +include/ncbi-tools++/algo/blast/core/blast_parameters.h +include/ncbi-tools++/algo/blast/core/blast_program.h +include/ncbi-tools++/algo/blast/core/blast_psi.h +include/ncbi-tools++/algo/blast/core/blast_query_info.h +include/ncbi-tools++/algo/blast/core/blast_rps.h +include/ncbi-tools++/algo/blast/core/blast_seg.h +include/ncbi-tools++/algo/blast/core/blast_seqsrc.h +include/ncbi-tools++/algo/blast/core/blast_seqsrc_impl.h +include/ncbi-tools++/algo/blast/core/blast_setup.h +include/ncbi-tools++/algo/blast/core/blast_stat.h +include/ncbi-tools++/algo/blast/core/blast_sw.h +include/ncbi-tools++/algo/blast/core/blast_toolkit.h +include/ncbi-tools++/algo/blast/core/blast_traceback.h +include/ncbi-tools++/algo/blast/core/blast_tune.h +include/ncbi-tools++/algo/blast/core/blast_util.h +include/ncbi-tools++/algo/blast/core/gapinfo.h +include/ncbi-tools++/algo/blast/core/gencode_singleton.h +include/ncbi-tools++/algo/blast/core/greedy_align.h +include/ncbi-tools++/algo/blast/core/hspfilter_besthit.h +include/ncbi-tools++/algo/blast/core/hspfilter_collector.h +include/ncbi-tools++/algo/blast/core/hspfilter_culling.h +include/ncbi-tools++/algo/blast/core/hspfilter_mapper.h +include/ncbi-tools++/algo/blast/core/link_hsps.h +include/ncbi-tools++/algo/blast/core/lookup_util.h +include/ncbi-tools++/algo/blast/core/lookup_wrap.h +include/ncbi-tools++/algo/blast/core/mb_indexed_lookup.h +include/ncbi-tools++/algo/blast/core/na_ungapped.h +include/ncbi-tools++/algo/blast/core/ncbi_math.h +include/ncbi-tools++/algo/blast/core/ncbi_std.h +include/ncbi-tools++/algo/blast/core/pattern.h +include/ncbi-tools++/algo/blast/core/phi_extend.h +include/ncbi-tools++/algo/blast/core/phi_gapalign.h +include/ncbi-tools++/algo/blast/core/phi_lookup.h +include/ncbi-tools++/algo/blast/core/spliced_hits.h +include/ncbi-tools++/algo/blast/core/split_query.h +include/ncbi-tools++/algo/blast/dbindex/dbindex.hpp +include/ncbi-tools++/algo/blast/dbindex/dbindex_sp.hpp +include/ncbi-tools++/algo/blast/dbindex/sequence_istream.hpp +include/ncbi-tools++/algo/blast/dbindex/sequence_istream_bdb.hpp +include/ncbi-tools++/algo/blast/dbindex/sequence_istream_fasta.hpp +include/ncbi-tools++/algo/blast/format/blast_async_format.hpp +include/ncbi-tools++/algo/blast/format/blast_format.hpp +include/ncbi-tools++/algo/blast/format/blastfmtutil.hpp +include/ncbi-tools++/algo/blast/format/blastxml2_format.hpp +include/ncbi-tools++/algo/blast/format/blastxml_format.hpp +include/ncbi-tools++/algo/blast/format/build_archive.hpp +include/ncbi-tools++/algo/blast/format/data4xml2format.hpp +include/ncbi-tools++/algo/blast/format/data4xmlformat.hpp +include/ncbi-tools++/algo/blast/format/sam.hpp +include/ncbi-tools++/algo/blast/format/vecscreen_run.hpp +include/ncbi-tools++/algo/blast/igblast/igblast.hpp +include/ncbi-tools++/algo/blast/proteinkmer/blastkmer.hpp +include/ncbi-tools++/algo/blast/proteinkmer/blastkmerindex.hpp +include/ncbi-tools++/algo/blast/proteinkmer/blastkmeroptions.hpp +include/ncbi-tools++/algo/blast/proteinkmer/blastkmerresults.hpp +include/ncbi-tools++/algo/blast/proteinkmer/blastkmerutils.hpp +include/ncbi-tools++/algo/blast/proteinkmer/kblastapi.hpp +include/ncbi-tools++/algo/blast/proteinkmer/mhfile.hpp +include/ncbi-tools++/algo/dustmask/sdust.tex +include/ncbi-tools++/algo/dustmask/symdust.hpp +include/ncbi-tools++/algo/segmask/segmask.hpp +include/ncbi-tools++/algo/winmask/README.API +include/ncbi-tools++/algo/winmask/seq_masker.hpp +include/ncbi-tools++/algo/winmask/seq_masker_cache_boost.hpp +include/ncbi-tools++/algo/winmask/seq_masker_istat.hpp +include/ncbi-tools++/algo/winmask/seq_masker_istat_ascii.hpp +include/ncbi-tools++/algo/winmask/seq_masker_istat_bin.hpp +include/ncbi-tools++/algo/winmask/seq_masker_istat_factory.hpp +include/ncbi-tools++/algo/winmask/seq_masker_istat_oascii.hpp +include/ncbi-tools++/algo/winmask/seq_masker_istat_obinary.hpp +include/ncbi-tools++/algo/winmask/seq_masker_ostat.hpp +include/ncbi-tools++/algo/winmask/seq_masker_ostat_ascii.hpp +include/ncbi-tools++/algo/winmask/seq_masker_ostat_bin.hpp +include/ncbi-tools++/algo/winmask/seq_masker_ostat_factory.hpp +include/ncbi-tools++/algo/winmask/seq_masker_ostat_opt.hpp +include/ncbi-tools++/algo/winmask/seq_masker_ostat_opt_ascii.hpp +include/ncbi-tools++/algo/winmask/seq_masker_ostat_opt_bin.hpp +include/ncbi-tools++/algo/winmask/seq_masker_score.hpp +include/ncbi-tools++/algo/winmask/seq_masker_score_mean.hpp +include/ncbi-tools++/algo/winmask/seq_masker_score_mean_glob.hpp +include/ncbi-tools++/algo/winmask/seq_masker_score_min.hpp +include/ncbi-tools++/algo/winmask/seq_masker_uset_array.hpp +include/ncbi-tools++/algo/winmask/seq_masker_uset_hash.hpp +include/ncbi-tools++/algo/winmask/seq_masker_uset_simple.hpp +include/ncbi-tools++/algo/winmask/seq_masker_util.hpp +include/ncbi-tools++/algo/winmask/seq_masker_version.hpp +include/ncbi-tools++/algo/winmask/seq_masker_window.hpp +include/ncbi-tools++/algo/winmask/seq_masker_window_ambig.hpp +include/ncbi-tools++/algo/winmask/seq_masker_window_pattern.hpp +include/ncbi-tools++/algo/winmask/seq_masker_window_pattern_ambig.hpp +include/ncbi-tools++/algo/winmask/win_mask_config.hpp +include/ncbi-tools++/algo/winmask/win_mask_counts_converter.hpp +include/ncbi-tools++/algo/winmask/win_mask_dup_table.hpp +include/ncbi-tools++/algo/winmask/win_mask_gen_counts.hpp +include/ncbi-tools++/algo/winmask/win_mask_util.hpp +include/ncbi-tools++/cgi/caf.hpp +include/ncbi-tools++/cgi/cgi_exception.hpp +include/ncbi-tools++/cgi/cgi_serial.hpp +include/ncbi-tools++/cgi/cgi_session.hpp +include/ncbi-tools++/cgi/cgi_util.hpp +include/ncbi-tools++/cgi/cgiapp.hpp +include/ncbi-tools++/cgi/cgiapp_cached.hpp +include/ncbi-tools++/cgi/cgictx.hpp +include/ncbi-tools++/cgi/error_codes.hpp +include/ncbi-tools++/cgi/impl/cgi_entry_reader.hpp +include/ncbi-tools++/cgi/ncbicgi.hpp +include/ncbi-tools++/cgi/ncbicgir.hpp +include/ncbi-tools++/cgi/ncbires.hpp +include/ncbi-tools++/cgi/ref_args.hpp +include/ncbi-tools++/cgi/user_agent.hpp +include/ncbi-tools++/common/boost_skew_guard.hpp +include/ncbi-tools++/common/config/ncbiconf_msvc.h +include/ncbi-tools++/common/config/ncbiconf_universal.h +include/ncbi-tools++/common/config/ncbiconf_xcode.h +include/ncbi-tools++/common/header_template.hpp +include/ncbi-tools++/common/metamodules_doxygen.h +include/ncbi-tools++/common/ncbi_build_ver.h +include/ncbi-tools++/common/ncbi_build_ver.h.in +include/ncbi-tools++/common/ncbi_build_ver.h.last +include/ncbi-tools++/common/ncbi_export.h +include/ncbi-tools++/common/ncbi_package_ver.h +include/ncbi-tools++/common/ncbi_pch_impl.hpp +include/ncbi-tools++/common/ncbi_skew_guard.h +include/ncbi-tools++/common/ncbi_source_ver.h +include/ncbi-tools++/common/ncbiconf_impl.h +include/ncbi-tools++/common/test_assert.h +include/ncbi-tools++/common/test_assert_impl.h +include/ncbi-tools++/common/test_data_path.h +include/ncbi-tools++/connect/connect_export.h +include/ncbi-tools++/connect/email_diag_handler.hpp +include/ncbi-tools++/connect/error_codes.hpp +include/ncbi-tools++/connect/impl/server_connection.hpp +include/ncbi-tools++/connect/impl/thread_pool_for_server.hpp +include/ncbi-tools++/connect/ncbi_base64.h +include/ncbi-tools++/connect/ncbi_buffer.h +include/ncbi-tools++/connect/ncbi_conn_exception.hpp +include/ncbi-tools++/connect/ncbi_conn_reader_writer.hpp +include/ncbi-tools++/connect/ncbi_conn_stream.hpp +include/ncbi-tools++/connect/ncbi_conn_test.hpp +include/ncbi-tools++/connect/ncbi_connection.h +include/ncbi-tools++/connect/ncbi_connector.h +include/ncbi-tools++/connect/ncbi_connutil.h +include/ncbi-tools++/connect/ncbi_core.h +include/ncbi-tools++/connect/ncbi_core_cxx.hpp +include/ncbi-tools++/connect/ncbi_file_connector.h +include/ncbi-tools++/connect/ncbi_ftp_connector.h +include/ncbi-tools++/connect/ncbi_gnutls.h +include/ncbi-tools++/connect/ncbi_heapmgr.h +include/ncbi-tools++/connect/ncbi_host_info.h +include/ncbi-tools++/connect/ncbi_http_connector.h +include/ncbi-tools++/connect/ncbi_http_session.hpp +include/ncbi-tools++/connect/ncbi_iprange.h +include/ncbi-tools++/connect/ncbi_ipv6.h +include/ncbi-tools++/connect/ncbi_lbos.hpp +include/ncbi-tools++/connect/ncbi_localip.h +include/ncbi-tools++/connect/ncbi_mbedtls.h +include/ncbi-tools++/connect/ncbi_memory_connector.h +include/ncbi-tools++/connect/ncbi_misc.hpp +include/ncbi-tools++/connect/ncbi_monkey.hpp +include/ncbi-tools++/connect/ncbi_namedpipe.hpp +include/ncbi-tools++/connect/ncbi_namedpipe_connector.hpp +include/ncbi-tools++/connect/ncbi_pipe.hpp +include/ncbi-tools++/connect/ncbi_pipe_connector.hpp +include/ncbi-tools++/connect/ncbi_sendmail.h +include/ncbi-tools++/connect/ncbi_server_info.h +include/ncbi-tools++/connect/ncbi_service.h +include/ncbi-tools++/connect/ncbi_service_connector.h +include/ncbi-tools++/connect/ncbi_socket.h +include/ncbi-tools++/connect/ncbi_socket.hpp +include/ncbi-tools++/connect/ncbi_socket_connector.h +include/ncbi-tools++/connect/ncbi_socket_unix.h +include/ncbi-tools++/connect/ncbi_socket_unix.hpp +include/ncbi-tools++/connect/ncbi_tls.h +include/ncbi-tools++/connect/ncbi_types.h +include/ncbi-tools++/connect/ncbi_userhost.hpp +include/ncbi-tools++/connect/ncbi_util.h +include/ncbi-tools++/connect/server.hpp +include/ncbi-tools++/connect/server_monitor.hpp +include/ncbi-tools++/connect/services/blob_storage_netcache.hpp +include/ncbi-tools++/connect/services/clparser.hpp +include/ncbi-tools++/connect/services/compound_id.hpp +include/ncbi-tools++/connect/services/error_codes.hpp +include/ncbi-tools++/connect/services/grid_app_version_info.hpp +include/ncbi-tools++/connect/services/grid_client.hpp +include/ncbi-tools++/connect/services/grid_client_app.hpp +include/ncbi-tools++/connect/services/grid_globals.hpp +include/ncbi-tools++/connect/services/grid_rw_impl.hpp +include/ncbi-tools++/connect/services/grid_worker.hpp +include/ncbi-tools++/connect/services/grid_worker_app.hpp +include/ncbi-tools++/connect/services/impl/neticache_client_int.hpp +include/ncbi-tools++/connect/services/impl/netschedule_api_int.hpp +include/ncbi-tools++/connect/services/impl/netstorage_impl.hpp +include/ncbi-tools++/connect/services/impl/netstorage_int.hpp +include/ncbi-tools++/connect/services/json_over_uttp.hpp +include/ncbi-tools++/connect/services/named_parameters.hpp +include/ncbi-tools++/connect/services/netcache_admin.hpp +include/ncbi-tools++/connect/services/netcache_api.hpp +include/ncbi-tools++/connect/services/netcache_api_expt.hpp +include/ncbi-tools++/connect/services/netcache_key.hpp +include/ncbi-tools++/connect/services/netcache_search.hpp +include/ncbi-tools++/connect/services/netcomponent.hpp +include/ncbi-tools++/connect/services/neticache_client.hpp +include/ncbi-tools++/connect/services/netschedule_api.hpp +include/ncbi-tools++/connect/services/netschedule_api_expt.hpp +include/ncbi-tools++/connect/services/netschedule_key.hpp +include/ncbi-tools++/connect/services/netservice_api.hpp +include/ncbi-tools++/connect/services/netservice_api_expt.hpp +include/ncbi-tools++/connect/services/netservice_protocol_parser.hpp +include/ncbi-tools++/connect/services/netstorage.hpp +include/ncbi-tools++/connect/services/netstorage_ft.hpp +include/ncbi-tools++/connect/services/ns_client_factory.hpp +include/ncbi-tools++/connect/services/ns_job_serializer.hpp +include/ncbi-tools++/connect/services/ns_output_parser.hpp +include/ncbi-tools++/connect/services/remote_app.hpp +include/ncbi-tools++/connect/services/srv_connections.hpp +include/ncbi-tools++/connect/services/srv_connections_expt.hpp +include/ncbi-tools++/connect/services/util.hpp +include/ncbi-tools++/connect/threaded_server.hpp +include/ncbi-tools++/corelib/blob_storage.hpp +include/ncbi-tools++/corelib/ddumpable.hpp +include/ncbi-tools++/corelib/env_reg.hpp +include/ncbi-tools++/corelib/error_codes.hpp +include/ncbi-tools++/corelib/expr.hpp +include/ncbi-tools++/corelib/guard.hpp +include/ncbi-tools++/corelib/hash_impl/_hash_fun.h +include/ncbi-tools++/corelib/hash_impl/_hash_map.h +include/ncbi-tools++/corelib/hash_impl/_hash_set.h +include/ncbi-tools++/corelib/hash_impl/_hashtable.c +include/ncbi-tools++/corelib/hash_impl/_hashtable.h +include/ncbi-tools++/corelib/hash_impl/_relops_hash_cont.h +include/ncbi-tools++/corelib/hash_impl/stlp_defs.hpp +include/ncbi-tools++/corelib/hash_map.hpp +include/ncbi-tools++/corelib/hash_set.hpp +include/ncbi-tools++/corelib/impl/listener_stack.hpp +include/ncbi-tools++/corelib/impl/ncbi_atomic_defs.h +include/ncbi-tools++/corelib/impl/ncbi_dbsvcmapper.hpp +include/ncbi-tools++/corelib/impl/ncbi_java.h +include/ncbi-tools++/corelib/impl/ncbi_os_mswin.h +include/ncbi-tools++/corelib/impl/ncbi_panfs.h +include/ncbi-tools++/corelib/impl/ncbi_param_impl.hpp +include/ncbi-tools++/corelib/impl/ncbi_toolkit_impl.hpp +include/ncbi-tools++/corelib/impl/ncbierror_impl.hpp +include/ncbi-tools++/corelib/impl/rwstreambuf.hpp +include/ncbi-tools++/corelib/impl/stringutf8_deprecated.hpp +include/ncbi-tools++/corelib/impl/stringutf8_deprecated.inl +include/ncbi-tools++/corelib/interprocess_lock.hpp +include/ncbi-tools++/corelib/metareg.hpp +include/ncbi-tools++/corelib/mswin_export.h +include/ncbi-tools++/corelib/mswin_no_popup.h +include/ncbi-tools++/corelib/ncbi_autoinit.hpp +include/ncbi-tools++/corelib/ncbi_base64.h +include/ncbi-tools++/corelib/ncbi_bswap.hpp +include/ncbi-tools++/corelib/ncbi_config.hpp +include/ncbi-tools++/corelib/ncbi_cookies.hpp +include/ncbi-tools++/corelib/ncbi_limits.h +include/ncbi-tools++/corelib/ncbi_limits.hpp +include/ncbi-tools++/corelib/ncbi_mask.hpp +include/ncbi-tools++/corelib/ncbi_message.hpp +include/ncbi-tools++/corelib/ncbi_os_mswin.hpp +include/ncbi-tools++/corelib/ncbi_os_unix.hpp +include/ncbi-tools++/corelib/ncbi_param.hpp +include/ncbi-tools++/corelib/ncbi_process.hpp +include/ncbi-tools++/corelib/ncbi_safe_static.hpp +include/ncbi-tools++/corelib/ncbi_signal.hpp +include/ncbi-tools++/corelib/ncbi_stack.hpp +include/ncbi-tools++/corelib/ncbi_strings.h +include/ncbi-tools++/corelib/ncbi_system.hpp +include/ncbi-tools++/corelib/ncbi_toolkit.hpp +include/ncbi-tools++/corelib/ncbi_tree.hpp +include/ncbi-tools++/corelib/ncbi_url.hpp +include/ncbi-tools++/corelib/ncbi_xstr.hpp +include/ncbi-tools++/corelib/ncbiapp.hpp +include/ncbi-tools++/corelib/ncbiargs.hpp +include/ncbi-tools++/corelib/ncbiatomic.h +include/ncbi-tools++/corelib/ncbiatomic.hpp +include/ncbi-tools++/corelib/ncbicfg.h +include/ncbi-tools++/corelib/ncbicntr.hpp +include/ncbi-tools++/corelib/ncbictype.hpp +include/ncbi-tools++/corelib/ncbidbg.hpp +include/ncbi-tools++/corelib/ncbidiag.hpp +include/ncbi-tools++/corelib/ncbidiag.inl +include/ncbi-tools++/corelib/ncbidll.hpp +include/ncbi-tools++/corelib/ncbienv.hpp +include/ncbi-tools++/corelib/ncbierror.hpp +include/ncbi-tools++/corelib/ncbiexec.hpp +include/ncbi-tools++/corelib/ncbiexpt.hpp +include/ncbi-tools++/corelib/ncbifile.hpp +include/ncbi-tools++/corelib/ncbifloat.h +include/ncbi-tools++/corelib/ncbimempool.hpp +include/ncbi-tools++/corelib/ncbimisc.hpp +include/ncbi-tools++/corelib/ncbimtx.hpp +include/ncbi-tools++/corelib/ncbimtx.inl +include/ncbi-tools++/corelib/ncbiobj.hpp +include/ncbi-tools++/corelib/ncbireg.hpp +include/ncbi-tools++/corelib/ncbistd.hpp +include/ncbi-tools++/corelib/ncbistl.hpp +include/ncbi-tools++/corelib/ncbistr.hpp +include/ncbi-tools++/corelib/ncbistr_util.hpp +include/ncbi-tools++/corelib/ncbistre.hpp +include/ncbi-tools++/corelib/ncbithr.hpp +include/ncbi-tools++/corelib/ncbithr_conf.hpp +include/ncbi-tools++/corelib/ncbitime.hpp +include/ncbi-tools++/corelib/ncbitype.h +include/ncbi-tools++/corelib/ncbiutil.hpp +include/ncbi-tools++/corelib/obj_pool.hpp +include/ncbi-tools++/corelib/obj_store.hpp +include/ncbi-tools++/corelib/perf_log.hpp +include/ncbi-tools++/corelib/plugin_manager.hpp +include/ncbi-tools++/corelib/plugin_manager_impl.hpp +include/ncbi-tools++/corelib/plugin_manager_store.hpp +include/ncbi-tools++/corelib/reader_writer.hpp +include/ncbi-tools++/corelib/request_control.hpp +include/ncbi-tools++/corelib/request_ctx.hpp +include/ncbi-tools++/corelib/request_status.hpp +include/ncbi-tools++/corelib/resource_info.hpp +include/ncbi-tools++/corelib/rwstream.hpp +include/ncbi-tools++/corelib/stream_utils.hpp +include/ncbi-tools++/corelib/syslog.hpp +include/ncbi-tools++/corelib/teamcity_messages.h +include/ncbi-tools++/corelib/tempstr.hpp +include/ncbi-tools++/corelib/test_boost.hpp +include/ncbi-tools++/corelib/test_mt.hpp +include/ncbi-tools++/corelib/version.hpp +include/ncbi-tools++/db/error_codes.hpp +include/ncbi-tools++/db/sqlite/sqlitewrapp.hpp +include/ncbi-tools++/dbapi/cache/dbapi_blob_cache.hpp +include/ncbi-tools++/dbapi/dbapi.hpp +include/ncbi-tools++/dbapi/dbapi_variant_convert.hpp +include/ncbi-tools++/dbapi/driver/dbapi_conn_factory.hpp +include/ncbi-tools++/dbapi/driver/dbapi_driver_conn_mgr.hpp +include/ncbi-tools++/dbapi/driver/dbapi_driver_conn_params.hpp +include/ncbi-tools++/dbapi/driver/dbapi_driver_convert.hpp +include/ncbi-tools++/dbapi/driver/dbapi_object_convert.hpp +include/ncbi-tools++/dbapi/driver/dbapi_svc_mapper.hpp +include/ncbi-tools++/dbapi/driver/driver_mgr.hpp +include/ncbi-tools++/dbapi/driver/drivers.hpp +include/ncbi-tools++/dbapi/driver/exception.hpp +include/ncbi-tools++/dbapi/driver/impl/dbapi_driver_utils.hpp +include/ncbi-tools++/dbapi/driver/impl/dbapi_impl_cmd.hpp +include/ncbi-tools++/dbapi/driver/impl/dbapi_impl_connection.hpp +include/ncbi-tools++/dbapi/driver/impl/dbapi_impl_context.hpp +include/ncbi-tools++/dbapi/driver/impl/dbapi_impl_result.hpp +include/ncbi-tools++/dbapi/driver/impl/handle_stack.hpp +include/ncbi-tools++/dbapi/driver/interfaces.hpp +include/ncbi-tools++/dbapi/driver/odbc/interfaces.hpp +include/ncbi-tools++/dbapi/driver/odbc/unix_odbc/odbcinst.h +include/ncbi-tools++/dbapi/driver/odbc/unix_odbc/sql.h +include/ncbi-tools++/dbapi/driver/odbc/unix_odbc/sqlext.h +include/ncbi-tools++/dbapi/driver/odbc/unix_odbc/sqlfront.h +include/ncbi-tools++/dbapi/driver/odbc/unix_odbc/sqlspi.h +include/ncbi-tools++/dbapi/driver/odbc/unix_odbc/sqltypes.h +include/ncbi-tools++/dbapi/driver/odbc/unix_odbc/sqlucode.h +include/ncbi-tools++/dbapi/driver/odbc/unix_odbc/unixodbc_conf.h +include/ncbi-tools++/dbapi/driver/public.hpp +include/ncbi-tools++/dbapi/driver/types.hpp +include/ncbi-tools++/dbapi/driver/util/blobstore.hpp +include/ncbi-tools++/dbapi/driver/util/numeric_convert.hpp +include/ncbi-tools++/dbapi/driver/util/parameters.hpp +include/ncbi-tools++/dbapi/driver/util/pointer_pot.hpp +include/ncbi-tools++/dbapi/driver_mgr.hpp +include/ncbi-tools++/dbapi/error_codes.hpp +include/ncbi-tools++/dbapi/variant.hpp +include/ncbi-tools++/html/commentdiag.hpp +include/ncbi-tools++/html/components.hpp +include/ncbi-tools++/html/components.inl +include/ncbi-tools++/html/error_codes.hpp +include/ncbi-tools++/html/factory.hpp +include/ncbi-tools++/html/html.hpp +include/ncbi-tools++/html/html.inl +include/ncbi-tools++/html/html_exception.hpp +include/ncbi-tools++/html/htmlhelper.hpp +include/ncbi-tools++/html/indentstream.hpp +include/ncbi-tools++/html/node.hpp +include/ncbi-tools++/html/node.inl +include/ncbi-tools++/html/nodemap.hpp +include/ncbi-tools++/html/page.hpp +include/ncbi-tools++/html/pager.hpp +include/ncbi-tools++/html/selection.hpp +include/ncbi-tools++/html/writer_htmlenc.hpp +include/ncbi-tools++/misc/error_codes.hpp +include/ncbi-tools++/ncbi_pch.hpp +include/ncbi-tools++/ncbi_random_macro.h +include/ncbi-tools++/ncbi_source_ver.h +include/ncbi-tools++/ncbiconf.h +include/ncbi-tools++/ncbiconf_unix.h +include/ncbi-tools++/objects/access/.cvsignore +include/ncbi-tools++/objects/access/.gitignore +include/ncbi-tools++/objects/access/Link_set.hpp +include/ncbi-tools++/objects/access/Link_set_.hpp +include/ncbi-tools++/objects/access/NCBI_Access_module.hpp +include/ncbi-tools++/objects/access/access__.hpp +include/ncbi-tools++/objects/biblio/.cvsignore +include/ncbi-tools++/objects/biblio/.gitignore +include/ncbi-tools++/objects/biblio/Affil.hpp +include/ncbi-tools++/objects/biblio/Affil_.hpp +include/ncbi-tools++/objects/biblio/ArticleId.hpp +include/ncbi-tools++/objects/biblio/ArticleIdSet.hpp +include/ncbi-tools++/objects/biblio/ArticleIdSet_.hpp +include/ncbi-tools++/objects/biblio/ArticleId_.hpp +include/ncbi-tools++/objects/biblio/Auth_list.hpp +include/ncbi-tools++/objects/biblio/Auth_list_.hpp +include/ncbi-tools++/objects/biblio/Author.hpp +include/ncbi-tools++/objects/biblio/Author_.hpp +include/ncbi-tools++/objects/biblio/CitRetract.hpp +include/ncbi-tools++/objects/biblio/CitRetract_.hpp +include/ncbi-tools++/objects/biblio/Cit_art.hpp +include/ncbi-tools++/objects/biblio/Cit_art_.hpp +include/ncbi-tools++/objects/biblio/Cit_book.hpp +include/ncbi-tools++/objects/biblio/Cit_book_.hpp +include/ncbi-tools++/objects/biblio/Cit_gen.hpp +include/ncbi-tools++/objects/biblio/Cit_gen_.hpp +include/ncbi-tools++/objects/biblio/Cit_jour.hpp +include/ncbi-tools++/objects/biblio/Cit_jour_.hpp +include/ncbi-tools++/objects/biblio/Cit_let.hpp +include/ncbi-tools++/objects/biblio/Cit_let_.hpp +include/ncbi-tools++/objects/biblio/Cit_pat.hpp +include/ncbi-tools++/objects/biblio/Cit_pat_.hpp +include/ncbi-tools++/objects/biblio/Cit_proc.hpp +include/ncbi-tools++/objects/biblio/Cit_proc_.hpp +include/ncbi-tools++/objects/biblio/Cit_sub.hpp +include/ncbi-tools++/objects/biblio/Cit_sub_.hpp +include/ncbi-tools++/objects/biblio/DOI.hpp +include/ncbi-tools++/objects/biblio/DOI_.hpp +include/ncbi-tools++/objects/biblio/Id_pat.hpp +include/ncbi-tools++/objects/biblio/Id_pat_.hpp +include/ncbi-tools++/objects/biblio/Imprint.hpp +include/ncbi-tools++/objects/biblio/Imprint_.hpp +include/ncbi-tools++/objects/biblio/MedlineUID.hpp +include/ncbi-tools++/objects/biblio/MedlineUID_.hpp +include/ncbi-tools++/objects/biblio/Meeting.hpp +include/ncbi-tools++/objects/biblio/Meeting_.hpp +include/ncbi-tools++/objects/biblio/NCBI_Biblio_module.hpp +include/ncbi-tools++/objects/biblio/PII.hpp +include/ncbi-tools++/objects/biblio/PII_.hpp +include/ncbi-tools++/objects/biblio/Patent_priority.hpp +include/ncbi-tools++/objects/biblio/Patent_priority_.hpp +include/ncbi-tools++/objects/biblio/PmPid.hpp +include/ncbi-tools++/objects/biblio/PmPid_.hpp +include/ncbi-tools++/objects/biblio/PmcID.hpp +include/ncbi-tools++/objects/biblio/PmcID_.hpp +include/ncbi-tools++/objects/biblio/PmcPid.hpp +include/ncbi-tools++/objects/biblio/PmcPid_.hpp +include/ncbi-tools++/objects/biblio/PubMedId.hpp +include/ncbi-tools++/objects/biblio/PubMedId_.hpp +include/ncbi-tools++/objects/biblio/PubStatus.hpp +include/ncbi-tools++/objects/biblio/PubStatusDate.hpp +include/ncbi-tools++/objects/biblio/PubStatusDateSet.hpp +include/ncbi-tools++/objects/biblio/PubStatusDateSet_.hpp +include/ncbi-tools++/objects/biblio/PubStatusDate_.hpp +include/ncbi-tools++/objects/biblio/PubStatus_.hpp +include/ncbi-tools++/objects/biblio/Title.hpp +include/ncbi-tools++/objects/biblio/Title_.hpp +include/ncbi-tools++/objects/biblio/biblio__.hpp +include/ncbi-tools++/objects/biblio/biblio_macros.hpp +include/ncbi-tools++/objects/biblio/citation_base.hpp +include/ncbi-tools++/objects/biotree/.cvsignore +include/ncbi-tools++/objects/biotree/.gitignore +include/ncbi-tools++/objects/biotree/BioTreeContainer.hpp +include/ncbi-tools++/objects/biotree/BioTreeContainer_.hpp +include/ncbi-tools++/objects/biotree/DistanceMatrix.hpp +include/ncbi-tools++/objects/biotree/DistanceMatrix_.hpp +include/ncbi-tools++/objects/biotree/FeatureDescr.hpp +include/ncbi-tools++/objects/biotree/FeatureDescr_.hpp +include/ncbi-tools++/objects/biotree/FeatureDictSet.hpp +include/ncbi-tools++/objects/biotree/FeatureDictSet_.hpp +include/ncbi-tools++/objects/biotree/NCBI_BioTree_module.hpp +include/ncbi-tools++/objects/biotree/Node.hpp +include/ncbi-tools++/objects/biotree/NodeFeature.hpp +include/ncbi-tools++/objects/biotree/NodeFeatureSet.hpp +include/ncbi-tools++/objects/biotree/NodeFeatureSet_.hpp +include/ncbi-tools++/objects/biotree/NodeFeature_.hpp +include/ncbi-tools++/objects/biotree/NodeSet.hpp +include/ncbi-tools++/objects/biotree/NodeSet_.hpp +include/ncbi-tools++/objects/biotree/Node_.hpp +include/ncbi-tools++/objects/biotree/biotree__.hpp +include/ncbi-tools++/objects/blast/.cvsignore +include/ncbi-tools++/objects/blast/.gitignore +include/ncbi-tools++/objects/blast/Blas_get_searc_resul_reply.hpp +include/ncbi-tools++/objects/blast/Blas_get_searc_resul_reply_.hpp +include/ncbi-tools++/objects/blast/Blas_get_searc_resul_reque.hpp +include/ncbi-tools++/objects/blast/Blas_get_searc_resul_reque_.hpp +include/ncbi-tools++/objects/blast/Blas_get_searc_statu_reply.hpp +include/ncbi-tools++/objects/blast/Blas_get_searc_statu_reply_.hpp +include/ncbi-tools++/objects/blast/Blas_get_searc_statu_reque.hpp +include/ncbi-tools++/objects/blast/Blas_get_searc_statu_reque_.hpp +include/ncbi-tools++/objects/blast/Blas_get_searc_strat_reply.hpp +include/ncbi-tools++/objects/blast/Blas_get_searc_strat_reply_.hpp +include/ncbi-tools++/objects/blast/Blas_get_searc_strat_reque.hpp +include/ncbi-tools++/objects/blast/Blas_get_searc_strat_reque_.hpp +include/ncbi-tools++/objects/blast/Blas_get_windo_taxid_reply.hpp +include/ncbi-tools++/objects/blast/Blas_get_windo_taxid_reply_.hpp +include/ncbi-tools++/objects/blast/Blast4_alignment_for_query.hpp +include/ncbi-tools++/objects/blast/Blast4_alignment_for_query_.hpp +include/ncbi-tools++/objects/blast/Blast4_archive.hpp +include/ncbi-tools++/objects/blast/Blast4_archive_.hpp +include/ncbi-tools++/objects/blast/Blast4_cutoff.hpp +include/ncbi-tools++/objects/blast/Blast4_cutoff_.hpp +include/ncbi-tools++/objects/blast/Blast4_database.hpp +include/ncbi-tools++/objects/blast/Blast4_database_.hpp +include/ncbi-tools++/objects/blast/Blast4_database_info.hpp +include/ncbi-tools++/objects/blast/Blast4_database_info_.hpp +include/ncbi-tools++/objects/blast/Blast4_error.hpp +include/ncbi-tools++/objects/blast/Blast4_error_.hpp +include/ncbi-tools++/objects/blast/Blast4_error_code.hpp +include/ncbi-tools++/objects/blast/Blast4_error_code_.hpp +include/ncbi-tools++/objects/blast/Blast4_error_flags.hpp +include/ncbi-tools++/objects/blast/Blast4_error_flags_.hpp +include/ncbi-tools++/objects/blast/Blast4_finish_params_reply.hpp +include/ncbi-tools++/objects/blast/Blast4_finish_params_reply_.hpp +include/ncbi-tools++/objects/blast/Blast4_frame_type.hpp +include/ncbi-tools++/objects/blast/Blast4_frame_type_.hpp +include/ncbi-tools++/objects/blast/Blast4_get_databa_ex_reply.hpp +include/ncbi-tools++/objects/blast/Blast4_get_databa_ex_reply_.hpp +include/ncbi-tools++/objects/blast/Blast4_get_databases_reply.hpp +include/ncbi-tools++/objects/blast/Blast4_get_databases_reply_.hpp +include/ncbi-tools++/objects/blast/Blast4_get_matrices_reply.hpp +include/ncbi-tools++/objects/blast/Blast4_get_matrices_reply_.hpp +include/ncbi-tools++/objects/blast/Blast4_get_parameter_reply.hpp +include/ncbi-tools++/objects/blast/Blast4_get_parameter_reply_.hpp +include/ncbi-tools++/objects/blast/Blast4_get_paramsets_reply.hpp +include/ncbi-tools++/objects/blast/Blast4_get_paramsets_reply_.hpp +include/ncbi-tools++/objects/blast/Blast4_get_programs_reply.hpp +include/ncbi-tools++/objects/blast/Blast4_get_programs_reply_.hpp +include/ncbi-tools++/objects/blast/Blast4_get_queries_reply.hpp +include/ncbi-tools++/objects/blast/Blast4_get_queries_reply_.hpp +include/ncbi-tools++/objects/blast/Blast4_get_seq_parts_reply.hpp +include/ncbi-tools++/objects/blast/Blast4_get_seq_parts_reply_.hpp +include/ncbi-tools++/objects/blast/Blast4_get_sequenc_request.hpp +include/ncbi-tools++/objects/blast/Blast4_get_sequenc_request_.hpp +include/ncbi-tools++/objects/blast/Blast4_get_sequences_reply.hpp +include/ncbi-tools++/objects/blast/Blast4_get_sequences_reply_.hpp +include/ncbi-tools++/objects/blast/Blast4_ka_block.hpp +include/ncbi-tools++/objects/blast/Blast4_ka_block_.hpp +include/ncbi-tools++/objects/blast/Blast4_mask.hpp +include/ncbi-tools++/objects/blast/Blast4_mask_.hpp +include/ncbi-tools++/objects/blast/Blast4_matrix_id.hpp +include/ncbi-tools++/objects/blast/Blast4_matrix_id_.hpp +include/ncbi-tools++/objects/blast/Blast4_parameter.hpp +include/ncbi-tools++/objects/blast/Blast4_parameter_.hpp +include/ncbi-tools++/objects/blast/Blast4_parameter_info.hpp +include/ncbi-tools++/objects/blast/Blast4_parameter_info_.hpp +include/ncbi-tools++/objects/blast/Blast4_parameters.hpp +include/ncbi-tools++/objects/blast/Blast4_parameters_.hpp +include/ncbi-tools++/objects/blast/Blast4_phi_alignments.hpp +include/ncbi-tools++/objects/blast/Blast4_phi_alignments_.hpp +include/ncbi-tools++/objects/blast/Blast4_program_info.hpp +include/ncbi-tools++/objects/blast/Blast4_program_info_.hpp +include/ncbi-tools++/objects/blast/Blast4_queries.hpp +include/ncbi-tools++/objects/blast/Blast4_queries_.hpp +include/ncbi-tools++/objects/blast/Blast4_queue_search_reply.hpp +include/ncbi-tools++/objects/blast/Blast4_queue_search_reply_.hpp +include/ncbi-tools++/objects/blast/Blast4_queue_search_reques.hpp +include/ncbi-tools++/objects/blast/Blast4_queue_search_reques_.hpp +include/ncbi-tools++/objects/blast/Blast4_range.hpp +include/ncbi-tools++/objects/blast/Blast4_range_.hpp +include/ncbi-tools++/objects/blast/Blast4_reply.hpp +include/ncbi-tools++/objects/blast/Blast4_reply_.hpp +include/ncbi-tools++/objects/blast/Blast4_reply_body.hpp +include/ncbi-tools++/objects/blast/Blast4_reply_body_.hpp +include/ncbi-tools++/objects/blast/Blast4_request.hpp +include/ncbi-tools++/objects/blast/Blast4_request_.hpp +include/ncbi-tools++/objects/blast/Blast4_request_body.hpp +include/ncbi-tools++/objects/blast/Blast4_request_body_.hpp +include/ncbi-tools++/objects/blast/Blast4_residue_type.hpp +include/ncbi-tools++/objects/blast/Blast4_residue_type_.hpp +include/ncbi-tools++/objects/blast/Blast4_result_types.hpp +include/ncbi-tools++/objects/blast/Blast4_result_types_.hpp +include/ncbi-tools++/objects/blast/Blast4_seq_part_data.hpp +include/ncbi-tools++/objects/blast/Blast4_seq_part_data_.hpp +include/ncbi-tools++/objects/blast/Blast4_seqtech.hpp +include/ncbi-tools++/objects/blast/Blast4_seqtech_.hpp +include/ncbi-tools++/objects/blast/Blast4_simple_alignment.hpp +include/ncbi-tools++/objects/blast/Blast4_simple_alignment_.hpp +include/ncbi-tools++/objects/blast/Blast4_simple_results.hpp +include/ncbi-tools++/objects/blast/Blast4_simple_results_.hpp +include/ncbi-tools++/objects/blast/Blast4_strand_type.hpp +include/ncbi-tools++/objects/blast/Blast4_strand_type_.hpp +include/ncbi-tools++/objects/blast/Blast4_subject.hpp +include/ncbi-tools++/objects/blast/Blast4_subject_.hpp +include/ncbi-tools++/objects/blast/Blast4_task_info.hpp +include/ncbi-tools++/objects/blast/Blast4_task_info_.hpp +include/ncbi-tools++/objects/blast/Blast4_value.hpp +include/ncbi-tools++/objects/blast/Blast4_value_.hpp +include/ncbi-tools++/objects/blast/Blast_finish_params_reques.hpp +include/ncbi-tools++/objects/blast/Blast_finish_params_reques_.hpp +include/ncbi-tools++/objects/blast/Blast_get_databa_ex_reques.hpp +include/ncbi-tools++/objects/blast/Blast_get_databa_ex_reques_.hpp +include/ncbi-tools++/objects/blast/Blast_get_proto_info_reply.hpp +include/ncbi-tools++/objects/blast/Blast_get_proto_info_reply_.hpp +include/ncbi-tools++/objects/blast/Blast_get_proto_info_reque.hpp +include/ncbi-tools++/objects/blast/Blast_get_proto_info_reque_.hpp +include/ncbi-tools++/objects/blast/Blast_get_reque_info_reply.hpp +include/ncbi-tools++/objects/blast/Blast_get_reque_info_reply_.hpp +include/ncbi-tools++/objects/blast/Blast_get_reque_info_reque.hpp +include/ncbi-tools++/objects/blast/Blast_get_reque_info_reque_.hpp +include/ncbi-tools++/objects/blast/Blast_get_searc_info_reply.hpp +include/ncbi-tools++/objects/blast/Blast_get_searc_info_reply_.hpp +include/ncbi-tools++/objects/blast/Blast_get_searc_info_reque.hpp +include/ncbi-tools++/objects/blast/Blast_get_searc_info_reque_.hpp +include/ncbi-tools++/objects/blast/Blast_get_seq_parts_reques.hpp +include/ncbi-tools++/objects/blast/Blast_get_seq_parts_reques_.hpp +include/ncbi-tools++/objects/blast/NCBI_Blast4_module.hpp +include/ncbi-tools++/objects/blast/blast__.hpp +include/ncbi-tools++/objects/blast/blastclient.hpp +include/ncbi-tools++/objects/blast/blastclient_.hpp +include/ncbi-tools++/objects/blast/names.hpp +include/ncbi-tools++/objects/blastdb/.cvsignore +include/ncbi-tools++/objects/blastdb/.gitignore +include/ncbi-tools++/objects/blastdb/Blast_db_mask_info.hpp +include/ncbi-tools++/objects/blastdb/Blast_db_mask_info_.hpp +include/ncbi-tools++/objects/blastdb/Blast_def_line.hpp +include/ncbi-tools++/objects/blastdb/Blast_def_line_.hpp +include/ncbi-tools++/objects/blastdb/Blast_def_line_set.hpp +include/ncbi-tools++/objects/blastdb/Blast_def_line_set_.hpp +include/ncbi-tools++/objects/blastdb/Blast_filter_program.hpp +include/ncbi-tools++/objects/blastdb/Blast_filter_program_.hpp +include/ncbi-tools++/objects/blastdb/Blast_mask_list.hpp +include/ncbi-tools++/objects/blastdb/Blast_mask_list_.hpp +include/ncbi-tools++/objects/blastdb/NCBI_BlastDL_module.hpp +include/ncbi-tools++/objects/blastdb/blastdb__.hpp +include/ncbi-tools++/objects/blastdb/defline_extra.hpp +include/ncbi-tools++/objects/blastxml/.cvsignore +include/ncbi-tools++/objects/blastxml/.gitignore +include/ncbi-tools++/objects/blastxml/BlastOutput.hpp +include/ncbi-tools++/objects/blastxml/BlastOutput_.hpp +include/ncbi-tools++/objects/blastxml/Hit.hpp +include/ncbi-tools++/objects/blastxml/Hit_.hpp +include/ncbi-tools++/objects/blastxml/Hsp.hpp +include/ncbi-tools++/objects/blastxml/Hsp_.hpp +include/ncbi-tools++/objects/blastxml/Iteration.hpp +include/ncbi-tools++/objects/blastxml/Iteration_.hpp +include/ncbi-tools++/objects/blastxml/NCBI_BlastOutput_module.hpp +include/ncbi-tools++/objects/blastxml/Parameters.hpp +include/ncbi-tools++/objects/blastxml/Parameters_.hpp +include/ncbi-tools++/objects/blastxml/Statistics.hpp +include/ncbi-tools++/objects/blastxml/Statistics_.hpp +include/ncbi-tools++/objects/blastxml/blastxml__.hpp +include/ncbi-tools++/objects/blastxml2/.cvsignore +include/ncbi-tools++/objects/blastxml2/.gitignore +include/ncbi-tools++/objects/blastxml2/BlastOutput2.hpp +include/ncbi-tools++/objects/blastxml2/BlastOutput2_.hpp +include/ncbi-tools++/objects/blastxml2/BlastXML2.hpp +include/ncbi-tools++/objects/blastxml2/BlastXML2_.hpp +include/ncbi-tools++/objects/blastxml2/Err.hpp +include/ncbi-tools++/objects/blastxml2/Err_.hpp +include/ncbi-tools++/objects/blastxml2/Hit.hpp +include/ncbi-tools++/objects/blastxml2/HitDescr.hpp +include/ncbi-tools++/objects/blastxml2/HitDescr_.hpp +include/ncbi-tools++/objects/blastxml2/Hit_.hpp +include/ncbi-tools++/objects/blastxml2/Hsp.hpp +include/ncbi-tools++/objects/blastxml2/Hsp_.hpp +include/ncbi-tools++/objects/blastxml2/Iteration.hpp +include/ncbi-tools++/objects/blastxml2/Iteration_.hpp +include/ncbi-tools++/objects/blastxml2/NCBI_BlastOutput2_module.hpp +include/ncbi-tools++/objects/blastxml2/Parameters.hpp +include/ncbi-tools++/objects/blastxml2/Parameters_.hpp +include/ncbi-tools++/objects/blastxml2/Range.hpp +include/ncbi-tools++/objects/blastxml2/Range_.hpp +include/ncbi-tools++/objects/blastxml2/Report.hpp +include/ncbi-tools++/objects/blastxml2/Report_.hpp +include/ncbi-tools++/objects/blastxml2/Results.hpp +include/ncbi-tools++/objects/blastxml2/Results_.hpp +include/ncbi-tools++/objects/blastxml2/Search.hpp +include/ncbi-tools++/objects/blastxml2/Search_.hpp +include/ncbi-tools++/objects/blastxml2/Statistics.hpp +include/ncbi-tools++/objects/blastxml2/Statistics_.hpp +include/ncbi-tools++/objects/blastxml2/Target.hpp +include/ncbi-tools++/objects/blastxml2/Target_.hpp +include/ncbi-tools++/objects/blastxml2/blastxml2__.hpp +include/ncbi-tools++/objects/cdd/.cvsignore +include/ncbi-tools++/objects/cdd/.gitignore +include/ncbi-tools++/objects/cdd/Algorithm_type.hpp +include/ncbi-tools++/objects/cdd/Algorithm_type_.hpp +include/ncbi-tools++/objects/cdd/Align_annot.hpp +include/ncbi-tools++/objects/cdd/Align_annot_.hpp +include/ncbi-tools++/objects/cdd/Align_annot_set.hpp +include/ncbi-tools++/objects/cdd/Align_annot_set_.hpp +include/ncbi-tools++/objects/cdd/Cdd.hpp +include/ncbi-tools++/objects/cdd/Cdd_.hpp +include/ncbi-tools++/objects/cdd/Cdd_Project.hpp +include/ncbi-tools++/objects/cdd/Cdd_Project_.hpp +include/ncbi-tools++/objects/cdd/Cdd_Script.hpp +include/ncbi-tools++/objects/cdd/Cdd_Script_.hpp +include/ncbi-tools++/objects/cdd/Cdd_Viewer.hpp +include/ncbi-tools++/objects/cdd/Cdd_Viewer_.hpp +include/ncbi-tools++/objects/cdd/Cdd_Viewer_Rect.hpp +include/ncbi-tools++/objects/cdd/Cdd_Viewer_Rect_.hpp +include/ncbi-tools++/objects/cdd/Cdd_book_ref.hpp +include/ncbi-tools++/objects/cdd/Cdd_book_ref_.hpp +include/ncbi-tools++/objects/cdd/Cdd_descr.hpp +include/ncbi-tools++/objects/cdd/Cdd_descr_.hpp +include/ncbi-tools++/objects/cdd/Cdd_descr_set.hpp +include/ncbi-tools++/objects/cdd/Cdd_descr_set_.hpp +include/ncbi-tools++/objects/cdd/Cdd_id.hpp +include/ncbi-tools++/objects/cdd/Cdd_id_.hpp +include/ncbi-tools++/objects/cdd/Cdd_id_set.hpp +include/ncbi-tools++/objects/cdd/Cdd_id_set_.hpp +include/ncbi-tools++/objects/cdd/Cdd_org_ref.hpp +include/ncbi-tools++/objects/cdd/Cdd_org_ref_.hpp +include/ncbi-tools++/objects/cdd/Cdd_org_ref_set.hpp +include/ncbi-tools++/objects/cdd/Cdd_org_ref_set_.hpp +include/ncbi-tools++/objects/cdd/Cdd_pref_node_descr.hpp +include/ncbi-tools++/objects/cdd/Cdd_pref_node_descr_.hpp +include/ncbi-tools++/objects/cdd/Cdd_pref_node_descr_set.hpp +include/ncbi-tools++/objects/cdd/Cdd_pref_node_descr_set_.hpp +include/ncbi-tools++/objects/cdd/Cdd_pref_nodes.hpp +include/ncbi-tools++/objects/cdd/Cdd_pref_nodes_.hpp +include/ncbi-tools++/objects/cdd/Cdd_repeat.hpp +include/ncbi-tools++/objects/cdd/Cdd_repeat_.hpp +include/ncbi-tools++/objects/cdd/Cdd_set.hpp +include/ncbi-tools++/objects/cdd/Cdd_set_.hpp +include/ncbi-tools++/objects/cdd/Cdd_tree.hpp +include/ncbi-tools++/objects/cdd/Cdd_tree_.hpp +include/ncbi-tools++/objects/cdd/Cdd_tree_set.hpp +include/ncbi-tools++/objects/cdd/Cdd_tree_set_.hpp +include/ncbi-tools++/objects/cdd/Domain_parent.hpp +include/ncbi-tools++/objects/cdd/Domain_parent_.hpp +include/ncbi-tools++/objects/cdd/Feature_evidence.hpp +include/ncbi-tools++/objects/cdd/Feature_evidence_.hpp +include/ncbi-tools++/objects/cdd/Global_id.hpp +include/ncbi-tools++/objects/cdd/Global_id_.hpp +include/ncbi-tools++/objects/cdd/Matrix.hpp +include/ncbi-tools++/objects/cdd/Matrix_.hpp +include/ncbi-tools++/objects/cdd/NCBI_Cdd_module.hpp +include/ncbi-tools++/objects/cdd/Node_annotation.hpp +include/ncbi-tools++/objects/cdd/Node_annotation_.hpp +include/ncbi-tools++/objects/cdd/Reject_id.hpp +include/ncbi-tools++/objects/cdd/Reject_id_.hpp +include/ncbi-tools++/objects/cdd/SeqTree_node.hpp +include/ncbi-tools++/objects/cdd/SeqTree_node_.hpp +include/ncbi-tools++/objects/cdd/Sequence_tree.hpp +include/ncbi-tools++/objects/cdd/Sequence_tree_.hpp +include/ncbi-tools++/objects/cdd/Triangle.hpp +include/ncbi-tools++/objects/cdd/Triangle_.hpp +include/ncbi-tools++/objects/cdd/Update_align.hpp +include/ncbi-tools++/objects/cdd/Update_align_.hpp +include/ncbi-tools++/objects/cdd/Update_comment.hpp +include/ncbi-tools++/objects/cdd/Update_comment_.hpp +include/ncbi-tools++/objects/cdd/cdd__.hpp +include/ncbi-tools++/objects/cn3d/.cvsignore +include/ncbi-tools++/objects/cn3d/.gitignore +include/ncbi-tools++/objects/cn3d/Cn3d_GL_matrix.hpp +include/ncbi-tools++/objects/cn3d/Cn3d_GL_matrix_.hpp +include/ncbi-tools++/objects/cn3d/Cn3d_backbone_label_style.hpp +include/ncbi-tools++/objects/cn3d/Cn3d_backbone_label_style_.hpp +include/ncbi-tools++/objects/cn3d/Cn3d_backbone_style.hpp +include/ncbi-tools++/objects/cn3d/Cn3d_backbone_style_.hpp +include/ncbi-tools++/objects/cn3d/Cn3d_backbone_type.hpp +include/ncbi-tools++/objects/cn3d/Cn3d_backbone_type_.hpp +include/ncbi-tools++/objects/cn3d/Cn3d_color.hpp +include/ncbi-tools++/objects/cn3d/Cn3d_color_.hpp +include/ncbi-tools++/objects/cn3d/Cn3d_color_scheme.hpp +include/ncbi-tools++/objects/cn3d/Cn3d_color_scheme_.hpp +include/ncbi-tools++/objects/cn3d/Cn3d_drawing_style.hpp +include/ncbi-tools++/objects/cn3d/Cn3d_drawing_style_.hpp +include/ncbi-tools++/objects/cn3d/Cn3d_general_style.hpp +include/ncbi-tools++/objects/cn3d/Cn3d_general_style_.hpp +include/ncbi-tools++/objects/cn3d/Cn3d_molecule_location.hpp +include/ncbi-tools++/objects/cn3d/Cn3d_molecule_location_.hpp +include/ncbi-tools++/objects/cn3d/Cn3d_object_location.hpp +include/ncbi-tools++/objects/cn3d/Cn3d_object_location_.hpp +include/ncbi-tools++/objects/cn3d/Cn3d_residue_range.hpp +include/ncbi-tools++/objects/cn3d/Cn3d_residue_range_.hpp +include/ncbi-tools++/objects/cn3d/Cn3d_style_dictionary.hpp +include/ncbi-tools++/objects/cn3d/Cn3d_style_dictionary_.hpp +include/ncbi-tools++/objects/cn3d/Cn3d_style_settings.hpp +include/ncbi-tools++/objects/cn3d/Cn3d_style_settings_.hpp +include/ncbi-tools++/objects/cn3d/Cn3d_style_settings_set.hpp +include/ncbi-tools++/objects/cn3d/Cn3d_style_settings_set_.hpp +include/ncbi-tools++/objects/cn3d/Cn3d_style_table_id.hpp +include/ncbi-tools++/objects/cn3d/Cn3d_style_table_id_.hpp +include/ncbi-tools++/objects/cn3d/Cn3d_style_table_item.hpp +include/ncbi-tools++/objects/cn3d/Cn3d_style_table_item_.hpp +include/ncbi-tools++/objects/cn3d/Cn3d_user_annotation.hpp +include/ncbi-tools++/objects/cn3d/Cn3d_user_annotation_.hpp +include/ncbi-tools++/objects/cn3d/Cn3d_user_annotations.hpp +include/ncbi-tools++/objects/cn3d/Cn3d_user_annotations_.hpp +include/ncbi-tools++/objects/cn3d/Cn3d_vector.hpp +include/ncbi-tools++/objects/cn3d/Cn3d_vector_.hpp +include/ncbi-tools++/objects/cn3d/Cn3d_view_settings.hpp +include/ncbi-tools++/objects/cn3d/Cn3d_view_settings_.hpp +include/ncbi-tools++/objects/cn3d/NCBI_Cn3d_module.hpp +include/ncbi-tools++/objects/cn3d/cn3d__.hpp +include/ncbi-tools++/objects/coords/.cvsignore +include/ncbi-tools++/objects/coords/.gitignore +include/ncbi-tools++/objects/coords/HGVS_Coordinate.hpp +include/ncbi-tools++/objects/coords/HGVS_Coordinate_.hpp +include/ncbi-tools++/objects/coords/HGVS_Coordinate_Set.hpp +include/ncbi-tools++/objects/coords/HGVS_Coordinate_Set_.hpp +include/ncbi-tools++/objects/coords/NCBI_HGVSCoordinate_module.hpp +include/ncbi-tools++/objects/coords/objcoords__.hpp +include/ncbi-tools++/objects/docsum/.cvsignore +include/ncbi-tools++/objects/docsum/.gitignore +include/ncbi-tools++/objects/docsum/Assay.hpp +include/ncbi-tools++/objects/docsum/Assay_.hpp +include/ncbi-tools++/objects/docsum/Assembly.hpp +include/ncbi-tools++/objects/docsum/Assembly_.hpp +include/ncbi-tools++/objects/docsum/BaseURL.hpp +include/ncbi-tools++/objects/docsum/BaseURL_.hpp +include/ncbi-tools++/objects/docsum/Component.hpp +include/ncbi-tools++/objects/docsum/Component_.hpp +include/ncbi-tools++/objects/docsum/Docsum_3_4_module.hpp +include/ncbi-tools++/objects/docsum/ExchangeSet.hpp +include/ncbi-tools++/objects/docsum/ExchangeSet_.hpp +include/ncbi-tools++/objects/docsum/FxnSet.hpp +include/ncbi-tools++/objects/docsum/FxnSet_.hpp +include/ncbi-tools++/objects/docsum/MapLoc.hpp +include/ncbi-tools++/objects/docsum/MapLoc_.hpp +include/ncbi-tools++/objects/docsum/PrimarySequence.hpp +include/ncbi-tools++/objects/docsum/PrimarySequence_.hpp +include/ncbi-tools++/objects/docsum/Rs.hpp +include/ncbi-tools++/objects/docsum/RsLinkout.hpp +include/ncbi-tools++/objects/docsum/RsLinkout_.hpp +include/ncbi-tools++/objects/docsum/RsStruct.hpp +include/ncbi-tools++/objects/docsum/RsStruct_.hpp +include/ncbi-tools++/objects/docsum/Rs_.hpp +include/ncbi-tools++/objects/docsum/Ss.hpp +include/ncbi-tools++/objects/docsum/Ss_.hpp +include/ncbi-tools++/objects/docsum/docsum__.hpp +include/ncbi-tools++/objects/entrez2/.cvsignore +include/ncbi-tools++/objects/entrez2/.gitignore +include/ncbi-tools++/objects/entrez2/E2Reply.hpp +include/ncbi-tools++/objects/entrez2/E2Reply_.hpp +include/ncbi-tools++/objects/entrez2/E2Request.hpp +include/ncbi-tools++/objects/entrez2/E2Request_.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_boolean_element.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_boolean_element_.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_boolean_exp.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_boolean_exp_.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_boolean_reply.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_boolean_reply_.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_boolean_term.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_boolean_term_.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_db_id.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_db_id_.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_db_info.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_db_info_.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_docsum.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_docsum_.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_docsum_data.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_docsum_data_.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_docsum_field_info.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_docsum_field_info_.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_docsum_field_type.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_docsum_field_type_.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_docsum_list.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_docsum_list_.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_dt.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_dt_.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_dt_filter.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_dt_filter_.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_eval_boolean.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_eval_boolean_.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_field_id.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_field_id_.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_field_info.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_field_info_.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_get_links.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_get_links_.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_hier_node.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_hier_node_.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_hier_query.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_hier_query_.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_id.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_id_.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_id_list.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_id_list_.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_info.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_info_.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_limits.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_limits_.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_link_count.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_link_count_.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_link_count_list.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_link_count_list_.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_link_id.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_link_id_.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_link_info.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_link_info_.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_link_set.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_link_set_.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_operator.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_operator_.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_reply.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_reply_.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_request.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_request_.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_term.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_term_.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_term_list.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_term_list_.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_term_pos.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_term_pos_.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_term_query.hpp +include/ncbi-tools++/objects/entrez2/Entrez2_term_query_.hpp +include/ncbi-tools++/objects/entrez2/NCBI_Entrez2_module.hpp +include/ncbi-tools++/objects/entrez2/entrez2__.hpp +include/ncbi-tools++/objects/entrez2/entrez2_client.hpp +include/ncbi-tools++/objects/entrez2/entrez2_client_.hpp +include/ncbi-tools++/objects/entrezgene/.cvsignore +include/ncbi-tools++/objects/entrezgene/.gitignore +include/ncbi-tools++/objects/entrezgene/Entrezgene.hpp +include/ncbi-tools++/objects/entrezgene/Entrezgene_.hpp +include/ncbi-tools++/objects/entrezgene/Entrezgene_Set.hpp +include/ncbi-tools++/objects/entrezgene/Entrezgene_Set_.hpp +include/ncbi-tools++/objects/entrezgene/Gene_commentary.hpp +include/ncbi-tools++/objects/entrezgene/Gene_commentary_.hpp +include/ncbi-tools++/objects/entrezgene/Gene_source.hpp +include/ncbi-tools++/objects/entrezgene/Gene_source_.hpp +include/ncbi-tools++/objects/entrezgene/Gene_track.hpp +include/ncbi-tools++/objects/entrezgene/Gene_track_.hpp +include/ncbi-tools++/objects/entrezgene/Maps.hpp +include/ncbi-tools++/objects/entrezgene/Maps_.hpp +include/ncbi-tools++/objects/entrezgene/NCBI_Entrezgene_module.hpp +include/ncbi-tools++/objects/entrezgene/Other_source.hpp +include/ncbi-tools++/objects/entrezgene/Other_source_.hpp +include/ncbi-tools++/objects/entrezgene/Xtra_Terms.hpp +include/ncbi-tools++/objects/entrezgene/Xtra_Terms_.hpp +include/ncbi-tools++/objects/entrezgene/entrezgene__.hpp +include/ncbi-tools++/objects/featdef/.cvsignore +include/ncbi-tools++/objects/featdef/.gitignore +include/ncbi-tools++/objects/featdef/FeatDef.hpp +include/ncbi-tools++/objects/featdef/FeatDefGroupSet.hpp +include/ncbi-tools++/objects/featdef/FeatDefGroupSet_.hpp +include/ncbi-tools++/objects/featdef/FeatDefSet.hpp +include/ncbi-tools++/objects/featdef/FeatDefSet_.hpp +include/ncbi-tools++/objects/featdef/FeatDef_.hpp +include/ncbi-tools++/objects/featdef/FeatDispGroup.hpp +include/ncbi-tools++/objects/featdef/FeatDispGroupSet.hpp +include/ncbi-tools++/objects/featdef/FeatDispGroupSet_.hpp +include/ncbi-tools++/objects/featdef/FeatDispGroup_.hpp +include/ncbi-tools++/objects/featdef/FeatMolType.hpp +include/ncbi-tools++/objects/featdef/FeatMolType_.hpp +include/ncbi-tools++/objects/featdef/NCBI_FeatDef_module.hpp +include/ncbi-tools++/objects/featdef/featdef__.hpp +include/ncbi-tools++/objects/gbproj/.cvsignore +include/ncbi-tools++/objects/gbproj/.gitignore +include/ncbi-tools++/objects/gbproj/AbstractProjectItem.hpp +include/ncbi-tools++/objects/gbproj/AbstractProjectItem_.hpp +include/ncbi-tools++/objects/gbproj/DummyObsoleteType.hpp +include/ncbi-tools++/objects/gbproj/DummyObsoleteType_.hpp +include/ncbi-tools++/objects/gbproj/FolderInfo.hpp +include/ncbi-tools++/objects/gbproj/FolderInfo_.hpp +include/ncbi-tools++/objects/gbproj/GBProject_ver2.hpp +include/ncbi-tools++/objects/gbproj/GBProject_ver2_.hpp +include/ncbi-tools++/objects/gbproj/LoaderDescriptor.hpp +include/ncbi-tools++/objects/gbproj/LoaderDescriptor_.hpp +include/ncbi-tools++/objects/gbproj/NCBI_GBProject_module.hpp +include/ncbi-tools++/objects/gbproj/ProjectAnnot.hpp +include/ncbi-tools++/objects/gbproj/ProjectAnnot_.hpp +include/ncbi-tools++/objects/gbproj/ProjectDescr.hpp +include/ncbi-tools++/objects/gbproj/ProjectDescr_.hpp +include/ncbi-tools++/objects/gbproj/ProjectFolder.hpp +include/ncbi-tools++/objects/gbproj/ProjectFolder_.hpp +include/ncbi-tools++/objects/gbproj/ProjectHistoryItem.hpp +include/ncbi-tools++/objects/gbproj/ProjectHistoryItem_.hpp +include/ncbi-tools++/objects/gbproj/ProjectItem.hpp +include/ncbi-tools++/objects/gbproj/ProjectItem_.hpp +include/ncbi-tools++/objects/gbproj/ViewDataLink.hpp +include/ncbi-tools++/objects/gbproj/ViewDataLink_.hpp +include/ncbi-tools++/objects/gbproj/ViewDescriptor.hpp +include/ncbi-tools++/objects/gbproj/ViewDescriptor_.hpp +include/ncbi-tools++/objects/gbproj/ViewMemento.hpp +include/ncbi-tools++/objects/gbproj/ViewMemento_.hpp +include/ncbi-tools++/objects/gbproj/gbproj__.hpp +include/ncbi-tools++/objects/gbproj/gbproj_export.h +include/ncbi-tools++/objects/gbproj/igbproject.hpp +include/ncbi-tools++/objects/gbseq/.cvsignore +include/ncbi-tools++/objects/gbseq/.gitignore +include/ncbi-tools++/objects/gbseq/GBAltSeqData.hpp +include/ncbi-tools++/objects/gbseq/GBAltSeqData_.hpp +include/ncbi-tools++/objects/gbseq/GBAltSeqItem.hpp +include/ncbi-tools++/objects/gbseq/GBAltSeqItem_.hpp +include/ncbi-tools++/objects/gbseq/GBAuthor.hpp +include/ncbi-tools++/objects/gbseq/GBAuthor_.hpp +include/ncbi-tools++/objects/gbseq/GBComment.hpp +include/ncbi-tools++/objects/gbseq/GBCommentParagraph.hpp +include/ncbi-tools++/objects/gbseq/GBCommentParagraph_.hpp +include/ncbi-tools++/objects/gbseq/GBComment_.hpp +include/ncbi-tools++/objects/gbseq/GBFeature.hpp +include/ncbi-tools++/objects/gbseq/GBFeatureSet.hpp +include/ncbi-tools++/objects/gbseq/GBFeatureSet_.hpp +include/ncbi-tools++/objects/gbseq/GBFeature_.hpp +include/ncbi-tools++/objects/gbseq/GBInterval.hpp +include/ncbi-tools++/objects/gbseq/GBInterval_.hpp +include/ncbi-tools++/objects/gbseq/GBKeyword.hpp +include/ncbi-tools++/objects/gbseq/GBKeyword_.hpp +include/ncbi-tools++/objects/gbseq/GBQualifier.hpp +include/ncbi-tools++/objects/gbseq/GBQualifier_.hpp +include/ncbi-tools++/objects/gbseq/GBReference.hpp +include/ncbi-tools++/objects/gbseq/GBReference_.hpp +include/ncbi-tools++/objects/gbseq/GBSecondary_accn.hpp +include/ncbi-tools++/objects/gbseq/GBSecondary_accn_.hpp +include/ncbi-tools++/objects/gbseq/GBSeq.hpp +include/ncbi-tools++/objects/gbseq/GBSeq_.hpp +include/ncbi-tools++/objects/gbseq/GBSeqid.hpp +include/ncbi-tools++/objects/gbseq/GBSeqid_.hpp +include/ncbi-tools++/objects/gbseq/GBSet.hpp +include/ncbi-tools++/objects/gbseq/GBSet_.hpp +include/ncbi-tools++/objects/gbseq/GBStrucComment.hpp +include/ncbi-tools++/objects/gbseq/GBStrucCommentItem.hpp +include/ncbi-tools++/objects/gbseq/GBStrucCommentItem_.hpp +include/ncbi-tools++/objects/gbseq/GBStrucComment_.hpp +include/ncbi-tools++/objects/gbseq/GBXref.hpp +include/ncbi-tools++/objects/gbseq/GBXref_.hpp +include/ncbi-tools++/objects/gbseq/NCBI_GBSeq_module.hpp +include/ncbi-tools++/objects/gbseq/gbseq__.hpp +include/ncbi-tools++/objects/general/.cvsignore +include/ncbi-tools++/objects/general/.gitignore +include/ncbi-tools++/objects/general/Date.hpp +include/ncbi-tools++/objects/general/Date_.hpp +include/ncbi-tools++/objects/general/Date_std.hpp +include/ncbi-tools++/objects/general/Date_std_.hpp +include/ncbi-tools++/objects/general/Dbtag.hpp +include/ncbi-tools++/objects/general/Dbtag_.hpp +include/ncbi-tools++/objects/general/Int_fuzz.hpp +include/ncbi-tools++/objects/general/Int_fuzz_.hpp +include/ncbi-tools++/objects/general/NCBI_General_module.hpp +include/ncbi-tools++/objects/general/Name_std.hpp +include/ncbi-tools++/objects/general/Name_std_.hpp +include/ncbi-tools++/objects/general/Object_id.hpp +include/ncbi-tools++/objects/general/Object_id_.hpp +include/ncbi-tools++/objects/general/Person_id.hpp +include/ncbi-tools++/objects/general/Person_id_.hpp +include/ncbi-tools++/objects/general/User_field.hpp +include/ncbi-tools++/objects/general/User_field_.hpp +include/ncbi-tools++/objects/general/User_object.hpp +include/ncbi-tools++/objects/general/User_object_.hpp +include/ncbi-tools++/objects/general/general__.hpp +include/ncbi-tools++/objects/general/general_exception.hpp +include/ncbi-tools++/objects/general/general_macros.hpp +include/ncbi-tools++/objects/general/uoconv.hpp +include/ncbi-tools++/objects/genesbyloc/.cvsignore +include/ncbi-tools++/objects/genesbyloc/.gitignore +include/ncbi-tools++/objects/genesbyloc/GBL_Data.hpp +include/ncbi-tools++/objects/genesbyloc/GBL_Data_.hpp +include/ncbi-tools++/objects/genesbyloc/GBL_Gene.hpp +include/ncbi-tools++/objects/genesbyloc/GBL_Gene_.hpp +include/ncbi-tools++/objects/genesbyloc/GBL_Reply.hpp +include/ncbi-tools++/objects/genesbyloc/GBL_Reply_.hpp +include/ncbi-tools++/objects/genesbyloc/NCBI_GenesByLoc_module.hpp +include/ncbi-tools++/objects/genesbyloc/genesbyloc__.hpp +include/ncbi-tools++/objects/genomecoll/.cvsignore +include/ncbi-tools++/objects/genomecoll/.gitignore +include/ncbi-tools++/objects/genomecoll/GCClientRequest.hpp +include/ncbi-tools++/objects/genomecoll/GCClientRequest_.hpp +include/ncbi-tools++/objects/genomecoll/GCClientResponse.hpp +include/ncbi-tools++/objects/genomecoll/GCClientResponse_.hpp +include/ncbi-tools++/objects/genomecoll/GCClient_AssembliesForSequ.hpp +include/ncbi-tools++/objects/genomecoll/GCClient_AssembliesForSequ_.hpp +include/ncbi-tools++/objects/genomecoll/GCClient_AssemblyInfo.hpp +include/ncbi-tools++/objects/genomecoll/GCClient_AssemblyInfo_.hpp +include/ncbi-tools++/objects/genomecoll/GCClient_AssemblySequenceI.hpp +include/ncbi-tools++/objects/genomecoll/GCClient_AssemblySequenceI_.hpp +include/ncbi-tools++/objects/genomecoll/GCClient_AttributeFlags.hpp +include/ncbi-tools++/objects/genomecoll/GCClient_AttributeFlags_.hpp +include/ncbi-tools++/objects/genomecoll/GCClient_EquivalentAssembl.hpp +include/ncbi-tools++/objects/genomecoll/GCClient_EquivalentAssembl_.hpp +include/ncbi-tools++/objects/genomecoll/GCClient_Error.hpp +include/ncbi-tools++/objects/genomecoll/GCClient_Error_.hpp +include/ncbi-tools++/objects/genomecoll/GCClient_FindBestAssemblyF.hpp +include/ncbi-tools++/objects/genomecoll/GCClient_FindBestAssemblyF_.hpp +include/ncbi-tools++/objects/genomecoll/GCClient_FindBestAssemblyR.hpp +include/ncbi-tools++/objects/genomecoll/GCClient_FindBestAssemblyR_.hpp +include/ncbi-tools++/objects/genomecoll/GCClient_FindBestAssemblyS.hpp +include/ncbi-tools++/objects/genomecoll/GCClient_FindBestAssemblyS_.hpp +include/ncbi-tools++/objects/genomecoll/GCClient_GetAssemblyBlobRe.hpp +include/ncbi-tools++/objects/genomecoll/GCClient_GetAssemblyBlobRe_.hpp +include/ncbi-tools++/objects/genomecoll/GCClient_GetAssemblyBySequ.hpp +include/ncbi-tools++/objects/genomecoll/GCClient_GetAssemblyBySequ_.hpp +include/ncbi-tools++/objects/genomecoll/GCClient_GetAssemblyReques.hpp +include/ncbi-tools++/objects/genomecoll/GCClient_GetAssemblyReques_.hpp +include/ncbi-tools++/objects/genomecoll/GCClient_GetEquivalentAsse.hpp +include/ncbi-tools++/objects/genomecoll/GCClient_GetEquivalentAsse_.hpp +include/ncbi-tools++/objects/genomecoll/GCClient_ValidateChrTypeLo.hpp +include/ncbi-tools++/objects/genomecoll/GCClient_ValidateChrTypeLo_.hpp +include/ncbi-tools++/objects/genomecoll/GC_Assemblies.hpp +include/ncbi-tools++/objects/genomecoll/GC_Assemblies_.hpp +include/ncbi-tools++/objects/genomecoll/GC_Assembly.hpp +include/ncbi-tools++/objects/genomecoll/GC_AssemblyDesc.hpp +include/ncbi-tools++/objects/genomecoll/GC_AssemblyDesc_.hpp +include/ncbi-tools++/objects/genomecoll/GC_AssemblySet.hpp +include/ncbi-tools++/objects/genomecoll/GC_AssemblySet_.hpp +include/ncbi-tools++/objects/genomecoll/GC_AssemblyUnit.hpp +include/ncbi-tools++/objects/genomecoll/GC_AssemblyUnit_.hpp +include/ncbi-tools++/objects/genomecoll/GC_Assembly_.hpp +include/ncbi-tools++/objects/genomecoll/GC_DbTagAlias.hpp +include/ncbi-tools++/objects/genomecoll/GC_DbTagAlias_.hpp +include/ncbi-tools++/objects/genomecoll/GC_External_Seqid.hpp +include/ncbi-tools++/objects/genomecoll/GC_External_Seqid_.hpp +include/ncbi-tools++/objects/genomecoll/GC_Genome.hpp +include/ncbi-tools++/objects/genomecoll/GC_Genome_.hpp +include/ncbi-tools++/objects/genomecoll/GC_GenomicPart.hpp +include/ncbi-tools++/objects/genomecoll/GC_GenomicPart_.hpp +include/ncbi-tools++/objects/genomecoll/GC_Project.hpp +include/ncbi-tools++/objects/genomecoll/GC_Project_.hpp +include/ncbi-tools++/objects/genomecoll/GC_Query.hpp +include/ncbi-tools++/objects/genomecoll/GC_Query_.hpp +include/ncbi-tools++/objects/genomecoll/GC_Replicon.hpp +include/ncbi-tools++/objects/genomecoll/GC_Replicon_.hpp +include/ncbi-tools++/objects/genomecoll/GC_Scaf_stats.hpp +include/ncbi-tools++/objects/genomecoll/GC_Scaf_stats_.hpp +include/ncbi-tools++/objects/genomecoll/GC_SeqIdAlias.hpp +include/ncbi-tools++/objects/genomecoll/GC_SeqIdAlias_.hpp +include/ncbi-tools++/objects/genomecoll/GC_Sequence.hpp +include/ncbi-tools++/objects/genomecoll/GC_SequenceRole.hpp +include/ncbi-tools++/objects/genomecoll/GC_SequenceRole_.hpp +include/ncbi-tools++/objects/genomecoll/GC_SequenceStats.hpp +include/ncbi-tools++/objects/genomecoll/GC_SequenceStats_.hpp +include/ncbi-tools++/objects/genomecoll/GC_Sequence_.hpp +include/ncbi-tools++/objects/genomecoll/GC_TaggedSequences.hpp +include/ncbi-tools++/objects/genomecoll/GC_TaggedSequences_.hpp +include/ncbi-tools++/objects/genomecoll/GC_TypedSeqId.hpp +include/ncbi-tools++/objects/genomecoll/GC_TypedSeqId_.hpp +include/ncbi-tools++/objects/genomecoll/NCBI_GencollClient_module.hpp +include/ncbi-tools++/objects/genomecoll/NCBI_GenomeCollection_module.hpp +include/ncbi-tools++/objects/genomecoll/cached_assembly.hpp +include/ncbi-tools++/objects/genomecoll/gencoll_client__.hpp +include/ncbi-tools++/objects/genomecoll/genome_collection__.hpp +include/ncbi-tools++/objects/genomecoll/genomic_collections_cli.hpp +include/ncbi-tools++/objects/genomecoll/genomic_collections_cli_.hpp +include/ncbi-tools++/objects/homologene/.cvsignore +include/ncbi-tools++/objects/homologene/.gitignore +include/ncbi-tools++/objects/homologene/HG_Alignment.hpp +include/ncbi-tools++/objects/homologene/HG_AlignmentSet.hpp +include/ncbi-tools++/objects/homologene/HG_AlignmentSet_.hpp +include/ncbi-tools++/objects/homologene/HG_Alignment_.hpp +include/ncbi-tools++/objects/homologene/HG_Commentary.hpp +include/ncbi-tools++/objects/homologene/HG_CommentaryContainer.hpp +include/ncbi-tools++/objects/homologene/HG_CommentaryContainer_.hpp +include/ncbi-tools++/objects/homologene/HG_CommentarySet.hpp +include/ncbi-tools++/objects/homologene/HG_CommentarySet_.hpp +include/ncbi-tools++/objects/homologene/HG_Commentary_.hpp +include/ncbi-tools++/objects/homologene/HG_Domain.hpp +include/ncbi-tools++/objects/homologene/HG_Domain_.hpp +include/ncbi-tools++/objects/homologene/HG_Entry.hpp +include/ncbi-tools++/objects/homologene/HG_EntrySet.hpp +include/ncbi-tools++/objects/homologene/HG_EntrySet_.hpp +include/ncbi-tools++/objects/homologene/HG_Entry_.hpp +include/ncbi-tools++/objects/homologene/HG_Gene.hpp +include/ncbi-tools++/objects/homologene/HG_Gene_.hpp +include/ncbi-tools++/objects/homologene/HG_Link.hpp +include/ncbi-tools++/objects/homologene/HG_Link_.hpp +include/ncbi-tools++/objects/homologene/HG_Node.hpp +include/ncbi-tools++/objects/homologene/HG_Node_.hpp +include/ncbi-tools++/objects/homologene/HG_Node_id.hpp +include/ncbi-tools++/objects/homologene/HG_Node_id_.hpp +include/ncbi-tools++/objects/homologene/HG_Stats.hpp +include/ncbi-tools++/objects/homologene/HG_Stats_.hpp +include/ncbi-tools++/objects/homologene/HomoloGene_module.hpp +include/ncbi-tools++/objects/homologene/homologene__.hpp +include/ncbi-tools++/objects/id1/.cvsignore +include/ncbi-tools++/objects/id1/.gitignore +include/ncbi-tools++/objects/id1/Entry_complexities.hpp +include/ncbi-tools++/objects/id1/Entry_complexities_.hpp +include/ncbi-tools++/objects/id1/ID1SeqEntry_info.hpp +include/ncbi-tools++/objects/id1/ID1SeqEntry_info_.hpp +include/ncbi-tools++/objects/id1/ID1Seq_hist.hpp +include/ncbi-tools++/objects/id1/ID1Seq_hist_.hpp +include/ncbi-tools++/objects/id1/ID1blob_info.hpp +include/ncbi-tools++/objects/id1/ID1blob_info_.hpp +include/ncbi-tools++/objects/id1/ID1server_back.hpp +include/ncbi-tools++/objects/id1/ID1server_back_.hpp +include/ncbi-tools++/objects/id1/ID1server_debug.hpp +include/ncbi-tools++/objects/id1/ID1server_debug_.hpp +include/ncbi-tools++/objects/id1/ID1server_maxcomplex.hpp +include/ncbi-tools++/objects/id1/ID1server_maxcomplex_.hpp +include/ncbi-tools++/objects/id1/ID1server_request.hpp +include/ncbi-tools++/objects/id1/ID1server_request_.hpp +include/ncbi-tools++/objects/id1/NCBI_ID1Access_module.hpp +include/ncbi-tools++/objects/id1/id1__.hpp +include/ncbi-tools++/objects/id1/id1_client.hpp +include/ncbi-tools++/objects/id1/id1_client_.hpp +include/ncbi-tools++/objects/id2/.cvsignore +include/ncbi-tools++/objects/id2/.gitignore +include/ncbi-tools++/objects/id2/ID2S_Reply_Get_Chunk.hpp +include/ncbi-tools++/objects/id2/ID2S_Reply_Get_Chunk_.hpp +include/ncbi-tools++/objects/id2/ID2S_Reply_Get_Split_Info.hpp +include/ncbi-tools++/objects/id2/ID2S_Reply_Get_Split_Info_.hpp +include/ncbi-tools++/objects/id2/ID2S_Request_Get_Chunks.hpp +include/ncbi-tools++/objects/id2/ID2S_Request_Get_Chunks_.hpp +include/ncbi-tools++/objects/id2/ID2_Blob_Id.hpp +include/ncbi-tools++/objects/id2/ID2_Blob_Id_.hpp +include/ncbi-tools++/objects/id2/ID2_Blob_Seq_id.hpp +include/ncbi-tools++/objects/id2/ID2_Blob_Seq_id_.hpp +include/ncbi-tools++/objects/id2/ID2_Blob_Seq_ids.hpp +include/ncbi-tools++/objects/id2/ID2_Blob_Seq_ids_.hpp +include/ncbi-tools++/objects/id2/ID2_Blob_State.hpp +include/ncbi-tools++/objects/id2/ID2_Blob_State_.hpp +include/ncbi-tools++/objects/id2/ID2_Error.hpp +include/ncbi-tools++/objects/id2/ID2_Error_.hpp +include/ncbi-tools++/objects/id2/ID2_Get_Blob_Details.hpp +include/ncbi-tools++/objects/id2/ID2_Get_Blob_Details_.hpp +include/ncbi-tools++/objects/id2/ID2_Param.hpp +include/ncbi-tools++/objects/id2/ID2_Param_.hpp +include/ncbi-tools++/objects/id2/ID2_Params.hpp +include/ncbi-tools++/objects/id2/ID2_Params_.hpp +include/ncbi-tools++/objects/id2/ID2_Reply.hpp +include/ncbi-tools++/objects/id2/ID2_Reply_.hpp +include/ncbi-tools++/objects/id2/ID2_Reply_Data.hpp +include/ncbi-tools++/objects/id2/ID2_Reply_Data_.hpp +include/ncbi-tools++/objects/id2/ID2_Reply_Get_Blob.hpp +include/ncbi-tools++/objects/id2/ID2_Reply_Get_Blob_.hpp +include/ncbi-tools++/objects/id2/ID2_Reply_Get_Blob_Id.hpp +include/ncbi-tools++/objects/id2/ID2_Reply_Get_Blob_Id_.hpp +include/ncbi-tools++/objects/id2/ID2_Reply_Get_Blob_Seq_ids.hpp +include/ncbi-tools++/objects/id2/ID2_Reply_Get_Blob_Seq_ids_.hpp +include/ncbi-tools++/objects/id2/ID2_Reply_Get_Package.hpp +include/ncbi-tools++/objects/id2/ID2_Reply_Get_Package_.hpp +include/ncbi-tools++/objects/id2/ID2_Reply_Get_Seq_id.hpp +include/ncbi-tools++/objects/id2/ID2_Reply_Get_Seq_id_.hpp +include/ncbi-tools++/objects/id2/ID2_Reply_ReGet_Blob.hpp +include/ncbi-tools++/objects/id2/ID2_Reply_ReGet_Blob_.hpp +include/ncbi-tools++/objects/id2/ID2_Request.hpp +include/ncbi-tools++/objects/id2/ID2_Request_.hpp +include/ncbi-tools++/objects/id2/ID2_Request_Get_Blob_Id.hpp +include/ncbi-tools++/objects/id2/ID2_Request_Get_Blob_Id_.hpp +include/ncbi-tools++/objects/id2/ID2_Request_Get_Blob_Info.hpp +include/ncbi-tools++/objects/id2/ID2_Request_Get_Blob_Info_.hpp +include/ncbi-tools++/objects/id2/ID2_Request_Get_Packages.hpp +include/ncbi-tools++/objects/id2/ID2_Request_Get_Packages_.hpp +include/ncbi-tools++/objects/id2/ID2_Request_Get_Seq_id.hpp +include/ncbi-tools++/objects/id2/ID2_Request_Get_Seq_id_.hpp +include/ncbi-tools++/objects/id2/ID2_Request_Packet.hpp +include/ncbi-tools++/objects/id2/ID2_Request_Packet_.hpp +include/ncbi-tools++/objects/id2/ID2_Request_ReGet_Blob.hpp +include/ncbi-tools++/objects/id2/ID2_Request_ReGet_Blob_.hpp +include/ncbi-tools++/objects/id2/ID2_Seq_id.hpp +include/ncbi-tools++/objects/id2/ID2_Seq_id_.hpp +include/ncbi-tools++/objects/id2/NCBI_ID2Access_module.hpp +include/ncbi-tools++/objects/id2/id2__.hpp +include/ncbi-tools++/objects/id2/id2_client.hpp +include/ncbi-tools++/objects/id2/id2_client_.hpp +include/ncbi-tools++/objects/id2/id2processor.hpp +include/ncbi-tools++/objects/id2/id2processor_interface.hpp +include/ncbi-tools++/objects/insdseq/.cvsignore +include/ncbi-tools++/objects/insdseq/.gitignore +include/ncbi-tools++/objects/insdseq/INSDAltSeqData.hpp +include/ncbi-tools++/objects/insdseq/INSDAltSeqData_.hpp +include/ncbi-tools++/objects/insdseq/INSDAltSeqItem.hpp +include/ncbi-tools++/objects/insdseq/INSDAltSeqItem_.hpp +include/ncbi-tools++/objects/insdseq/INSDAuthor.hpp +include/ncbi-tools++/objects/insdseq/INSDAuthor_.hpp +include/ncbi-tools++/objects/insdseq/INSDComment.hpp +include/ncbi-tools++/objects/insdseq/INSDCommentParagraph.hpp +include/ncbi-tools++/objects/insdseq/INSDCommentParagraph_.hpp +include/ncbi-tools++/objects/insdseq/INSDComment_.hpp +include/ncbi-tools++/objects/insdseq/INSDFeature.hpp +include/ncbi-tools++/objects/insdseq/INSDFeatureSet.hpp +include/ncbi-tools++/objects/insdseq/INSDFeatureSet_.hpp +include/ncbi-tools++/objects/insdseq/INSDFeature_.hpp +include/ncbi-tools++/objects/insdseq/INSDInterval.hpp +include/ncbi-tools++/objects/insdseq/INSDInterval_.hpp +include/ncbi-tools++/objects/insdseq/INSDKeyword.hpp +include/ncbi-tools++/objects/insdseq/INSDKeyword_.hpp +include/ncbi-tools++/objects/insdseq/INSDQualifier.hpp +include/ncbi-tools++/objects/insdseq/INSDQualifier_.hpp +include/ncbi-tools++/objects/insdseq/INSDReference.hpp +include/ncbi-tools++/objects/insdseq/INSDReference_.hpp +include/ncbi-tools++/objects/insdseq/INSDSecondary_accn.hpp +include/ncbi-tools++/objects/insdseq/INSDSecondary_accn_.hpp +include/ncbi-tools++/objects/insdseq/INSDSeq.hpp +include/ncbi-tools++/objects/insdseq/INSDSeq_.hpp +include/ncbi-tools++/objects/insdseq/INSDSeqid.hpp +include/ncbi-tools++/objects/insdseq/INSDSeqid_.hpp +include/ncbi-tools++/objects/insdseq/INSDSet.hpp +include/ncbi-tools++/objects/insdseq/INSDSet_.hpp +include/ncbi-tools++/objects/insdseq/INSDStrucComment.hpp +include/ncbi-tools++/objects/insdseq/INSDStrucCommentItem.hpp +include/ncbi-tools++/objects/insdseq/INSDStrucCommentItem_.hpp +include/ncbi-tools++/objects/insdseq/INSDStrucComment_.hpp +include/ncbi-tools++/objects/insdseq/INSDXref.hpp +include/ncbi-tools++/objects/insdseq/INSDXref_.hpp +include/ncbi-tools++/objects/insdseq/INSD_INSDSeq_module.hpp +include/ncbi-tools++/objects/insdseq/insdseq__.hpp +include/ncbi-tools++/objects/macro/.cvsignore +include/ncbi-tools++/objects/macro/.gitignore +include/ncbi-tools++/objects/macro/AECRParse_action.hpp +include/ncbi-tools++/objects/macro/AECRParse_action_.hpp +include/ncbi-tools++/objects/macro/AECR_action.hpp +include/ncbi-tools++/objects/macro/AECR_action_.hpp +include/ncbi-tools++/objects/macro/Action_choice.hpp +include/ncbi-tools++/objects/macro/Action_choice_.hpp +include/ncbi-tools++/objects/macro/Add_descriptor_list_action.hpp +include/ncbi-tools++/objects/macro/Add_descriptor_list_action_.hpp +include/ncbi-tools++/objects/macro/Add_file_action.hpp +include/ncbi-tools++/objects/macro/Add_file_action_.hpp +include/ncbi-tools++/objects/macro/Adjus_featu_for_gaps_actio.hpp +include/ncbi-tools++/objects/macro/Adjus_featu_for_gaps_actio_.hpp +include/ncbi-tools++/objects/macro/Apply_action.hpp +include/ncbi-tools++/objects/macro/Apply_action_.hpp +include/ncbi-tools++/objects/macro/Apply_feature_action.hpp +include/ncbi-tools++/objects/macro/Apply_feature_action_.hpp +include/ncbi-tools++/objects/macro/Apply_table_action.hpp +include/ncbi-tools++/objects/macro/Apply_table_action_.hpp +include/ncbi-tools++/objects/macro/Apply_table_extra_data.hpp +include/ncbi-tools++/objects/macro/Apply_table_extra_data_.hpp +include/ncbi-tools++/objects/macro/Author_fix_action.hpp +include/ncbi-tools++/objects/macro/Author_fix_action_.hpp +include/ncbi-tools++/objects/macro/Author_fix_type.hpp +include/ncbi-tools++/objects/macro/Author_fix_type_.hpp +include/ncbi-tools++/objects/macro/Autod_misc_feat_parse_rule.hpp +include/ncbi-tools++/objects/macro/Autod_misc_feat_parse_rule_.hpp +include/ncbi-tools++/objects/macro/Autodef_action.hpp +include/ncbi-tools++/objects/macro/Autodef_action_.hpp +include/ncbi-tools++/objects/macro/Autodef_list_type.hpp +include/ncbi-tools++/objects/macro/Autodef_list_type_.hpp +include/ncbi-tools++/objects/macro/Autofix_action.hpp +include/ncbi-tools++/objects/macro/Autofix_action_.hpp +include/ncbi-tools++/objects/macro/Bond_type.hpp +include/ncbi-tools++/objects/macro/Bond_type_.hpp +include/ncbi-tools++/objects/macro/CDSGen_featur_type_constra.hpp +include/ncbi-tools++/objects/macro/CDSGen_featur_type_constra_.hpp +include/ncbi-tools++/objects/macro/CDSGenePr_constraint_field.hpp +include/ncbi-tools++/objects/macro/CDSGenePr_constraint_field_.hpp +include/ncbi-tools++/objects/macro/CDSGenePr_pseudo_constrain.hpp +include/ncbi-tools++/objects/macro/CDSGenePr_pseudo_constrain_.hpp +include/ncbi-tools++/objects/macro/CDSGenePro_qual_constraint.hpp +include/ncbi-tools++/objects/macro/CDSGenePro_qual_constraint_.hpp +include/ncbi-tools++/objects/macro/CDSGeneProt_field.hpp +include/ncbi-tools++/objects/macro/CDSGeneProt_field_.hpp +include/ncbi-tools++/objects/macro/CDSGeneProt_field_pair.hpp +include/ncbi-tools++/objects/macro/CDSGeneProt_field_pair_.hpp +include/ncbi-tools++/objects/macro/Cap_change.hpp +include/ncbi-tools++/objects/macro/Cap_change_.hpp +include/ncbi-tools++/objects/macro/Completedness_type.hpp +include/ncbi-tools++/objects/macro/Completedness_type_.hpp +include/ncbi-tools++/objects/macro/Constraint_choice.hpp +include/ncbi-tools++/objects/macro/Constraint_choice_.hpp +include/ncbi-tools++/objects/macro/Constraint_choice_set.hpp +include/ncbi-tools++/objects/macro/Constraint_choice_set_.hpp +include/ncbi-tools++/objects/macro/Conver_feature_dst_options.hpp +include/ncbi-tools++/objects/macro/Conver_feature_dst_options_.hpp +include/ncbi-tools++/objects/macro/Conver_feature_src_options.hpp +include/ncbi-tools++/objects/macro/Conver_feature_src_options_.hpp +include/ncbi-tools++/objects/macro/Convert_action.hpp +include/ncbi-tools++/objects/macro/Convert_action_.hpp +include/ncbi-tools++/objects/macro/Convert_feature_action.hpp +include/ncbi-tools++/objects/macro/Convert_feature_action_.hpp +include/ncbi-tools++/objects/macro/Convert_from_CDS_options.hpp +include/ncbi-tools++/objects/macro/Convert_from_CDS_options_.hpp +include/ncbi-tools++/objects/macro/Convert_location_type.hpp +include/ncbi-tools++/objects/macro/Convert_location_type_.hpp +include/ncbi-tools++/objects/macro/Copy_action.hpp +include/ncbi-tools++/objects/macro/Copy_action_.hpp +include/ncbi-tools++/objects/macro/Create_TSA_ids_action.hpp +include/ncbi-tools++/objects/macro/Create_TSA_ids_action_.hpp +include/ncbi-tools++/objects/macro/Create_TSA_ids_src.hpp +include/ncbi-tools++/objects/macro/Create_TSA_ids_src_.hpp +include/ncbi-tools++/objects/macro/DBLink_field_pair.hpp +include/ncbi-tools++/objects/macro/DBLink_field_pair_.hpp +include/ncbi-tools++/objects/macro/DBLink_field_type.hpp +include/ncbi-tools++/objects/macro/DBLink_field_type_.hpp +include/ncbi-tools++/objects/macro/Descriptor_type.hpp +include/ncbi-tools++/objects/macro/Descriptor_type_.hpp +include/ncbi-tools++/objects/macro/Edit_action.hpp +include/ncbi-tools++/objects/macro/Edit_action_.hpp +include/ncbi-tools++/objects/macro/Edit_featur_locatio_action.hpp +include/ncbi-tools++/objects/macro/Edit_featur_locatio_action_.hpp +include/ncbi-tools++/objects/macro/Edit_location_strand.hpp +include/ncbi-tools++/objects/macro/Edit_location_strand_.hpp +include/ncbi-tools++/objects/macro/ExistingTextOption.hpp +include/ncbi-tools++/objects/macro/ExistingTextOption_.hpp +include/ncbi-tools++/objects/macro/Extend_to_feature.hpp +include/ncbi-tools++/objects/macro/Extend_to_feature_.hpp +include/ncbi-tools++/objects/macro/Feat_qual_choice.hpp +include/ncbi-tools++/objects/macro/Feat_qual_choice_.hpp +include/ncbi-tools++/objects/macro/Feat_qual_legal.hpp +include/ncbi-tools++/objects/macro/Feat_qual_legal_.hpp +include/ncbi-tools++/objects/macro/Feat_qual_legal_set.hpp +include/ncbi-tools++/objects/macro/Feat_qual_legal_set_.hpp +include/ncbi-tools++/objects/macro/Feat_qual_legal_val.hpp +include/ncbi-tools++/objects/macro/Feat_qual_legal_val_.hpp +include/ncbi-tools++/objects/macro/Feat_qual_legal_val_choice.hpp +include/ncbi-tools++/objects/macro/Feat_qual_legal_val_choice_.hpp +include/ncbi-tools++/objects/macro/Featur_locatio_strand_from.hpp +include/ncbi-tools++/objects/macro/Featur_locatio_strand_from_.hpp +include/ncbi-tools++/objects/macro/Feature_field.hpp +include/ncbi-tools++/objects/macro/Feature_field_.hpp +include/ncbi-tools++/objects/macro/Feature_field_legal.hpp +include/ncbi-tools++/objects/macro/Feature_field_legal_.hpp +include/ncbi-tools++/objects/macro/Feature_field_pair.hpp +include/ncbi-tools++/objects/macro/Feature_field_pair_.hpp +include/ncbi-tools++/objects/macro/Feature_location_strand_to.hpp +include/ncbi-tools++/objects/macro/Feature_location_strand_to_.hpp +include/ncbi-tools++/objects/macro/Feature_stranded_constrain.hpp +include/ncbi-tools++/objects/macro/Feature_stranded_constrain_.hpp +include/ncbi-tools++/objects/macro/Field_constraint.hpp +include/ncbi-tools++/objects/macro/Field_constraint_.hpp +include/ncbi-tools++/objects/macro/Field_edit.hpp +include/ncbi-tools++/objects/macro/Field_edit_.hpp +include/ncbi-tools++/objects/macro/Field_edit_location.hpp +include/ncbi-tools++/objects/macro/Field_edit_location_.hpp +include/ncbi-tools++/objects/macro/Field_pair_type.hpp +include/ncbi-tools++/objects/macro/Field_pair_type_.hpp +include/ncbi-tools++/objects/macro/Field_type.hpp +include/ncbi-tools++/objects/macro/Field_type_.hpp +include/ncbi-tools++/objects/macro/Fix_author_caps.hpp +include/ncbi-tools++/objects/macro/Fix_author_caps_.hpp +include/ncbi-tools++/objects/macro/Fix_caps_action.hpp +include/ncbi-tools++/objects/macro/Fix_caps_action_.hpp +include/ncbi-tools++/objects/macro/Fix_format_action.hpp +include/ncbi-tools++/objects/macro/Fix_format_action_.hpp +include/ncbi-tools++/objects/macro/Fix_pub_caps_action.hpp +include/ncbi-tools++/objects/macro/Fix_pub_caps_action_.hpp +include/ncbi-tools++/objects/macro/Fix_sets_action.hpp +include/ncbi-tools++/objects/macro/Fix_sets_action_.hpp +include/ncbi-tools++/objects/macro/Fix_type.hpp +include/ncbi-tools++/objects/macro/Fix_type_.hpp +include/ncbi-tools++/objects/macro/Gene_xref_necessary_type.hpp +include/ncbi-tools++/objects/macro/Gene_xref_necessary_type_.hpp +include/ncbi-tools++/objects/macro/Gene_xref_suppression_type.hpp +include/ncbi-tools++/objects/macro/Gene_xref_suppression_type_.hpp +include/ncbi-tools++/objects/macro/Gene_xref_type.hpp +include/ncbi-tools++/objects/macro/Gene_xref_type_.hpp +include/ncbi-tools++/objects/macro/Location_choice.hpp +include/ncbi-tools++/objects/macro/Location_choice_.hpp +include/ncbi-tools++/objects/macro/Location_constraint.hpp +include/ncbi-tools++/objects/macro/Location_constraint_.hpp +include/ncbi-tools++/objects/macro/Location_edit_type.hpp +include/ncbi-tools++/objects/macro/Location_edit_type_.hpp +include/ncbi-tools++/objects/macro/Location_interval.hpp +include/ncbi-tools++/objects/macro/Location_interval_.hpp +include/ncbi-tools++/objects/macro/Location_pos_constraint.hpp +include/ncbi-tools++/objects/macro/Location_pos_constraint_.hpp +include/ncbi-tools++/objects/macro/Location_type_constraint.hpp +include/ncbi-tools++/objects/macro/Location_type_constraint_.hpp +include/ncbi-tools++/objects/macro/Macro_action_choice.hpp +include/ncbi-tools++/objects/macro/Macro_action_choice_.hpp +include/ncbi-tools++/objects/macro/Macro_action_list.hpp +include/ncbi-tools++/objects/macro/Macro_action_list_.hpp +include/ncbi-tools++/objects/macro/Macro_feature_type.hpp +include/ncbi-tools++/objects/macro/Macro_feature_type_.hpp +include/ncbi-tools++/objects/macro/Make_gene_xref_action.hpp +include/ncbi-tools++/objects/macro/Make_gene_xref_action_.hpp +include/ncbi-tools++/objects/macro/Match_type_constraint.hpp +include/ncbi-tools++/objects/macro/Match_type_constraint_.hpp +include/ncbi-tools++/objects/macro/Misc_field.hpp +include/ncbi-tools++/objects/macro/Misc_field_.hpp +include/ncbi-tools++/objects/macro/Molecule_class_type.hpp +include/ncbi-tools++/objects/macro/Molecule_class_type_.hpp +include/ncbi-tools++/objects/macro/Molecule_type.hpp +include/ncbi-tools++/objects/macro/Molecule_type_.hpp +include/ncbi-tools++/objects/macro/Molinfo_block.hpp +include/ncbi-tools++/objects/macro/Molinfo_block_.hpp +include/ncbi-tools++/objects/macro/Molinfo_completedness_pair.hpp +include/ncbi-tools++/objects/macro/Molinfo_completedness_pair_.hpp +include/ncbi-tools++/objects/macro/Molinfo_field.hpp +include/ncbi-tools++/objects/macro/Molinfo_field_.hpp +include/ncbi-tools++/objects/macro/Molinfo_field_constraint.hpp +include/ncbi-tools++/objects/macro/Molinfo_field_constraint_.hpp +include/ncbi-tools++/objects/macro/Molinfo_field_list.hpp +include/ncbi-tools++/objects/macro/Molinfo_field_list_.hpp +include/ncbi-tools++/objects/macro/Molinfo_field_pair.hpp +include/ncbi-tools++/objects/macro/Molinfo_field_pair_.hpp +include/ncbi-tools++/objects/macro/Molinfo_mol_class_pair.hpp +include/ncbi-tools++/objects/macro/Molinfo_mol_class_pair_.hpp +include/ncbi-tools++/objects/macro/Molinfo_molecule_pair.hpp +include/ncbi-tools++/objects/macro/Molinfo_molecule_pair_.hpp +include/ncbi-tools++/objects/macro/Molinfo_strand_pair.hpp +include/ncbi-tools++/objects/macro/Molinfo_strand_pair_.hpp +include/ncbi-tools++/objects/macro/Molinfo_technique_pair.hpp +include/ncbi-tools++/objects/macro/Molinfo_technique_pair_.hpp +include/ncbi-tools++/objects/macro/Molinfo_topology_pair.hpp +include/ncbi-tools++/objects/macro/Molinfo_topology_pair_.hpp +include/ncbi-tools++/objects/macro/NCBI_Macro_module.hpp +include/ncbi-tools++/objects/macro/Object_type_constraint.hpp +include/ncbi-tools++/objects/macro/Object_type_constraint_.hpp +include/ncbi-tools++/objects/macro/Parse_action.hpp +include/ncbi-tools++/objects/macro/Parse_action_.hpp +include/ncbi-tools++/objects/macro/Parse_dest.hpp +include/ncbi-tools++/objects/macro/Parse_dest_.hpp +include/ncbi-tools++/objects/macro/Parse_dst_org.hpp +include/ncbi-tools++/objects/macro/Parse_dst_org_.hpp +include/ncbi-tools++/objects/macro/Parse_src.hpp +include/ncbi-tools++/objects/macro/Parse_src_.hpp +include/ncbi-tools++/objects/macro/Parse_src_general_id.hpp +include/ncbi-tools++/objects/macro/Parse_src_general_id_.hpp +include/ncbi-tools++/objects/macro/Parse_src_org.hpp +include/ncbi-tools++/objects/macro/Parse_src_org_.hpp +include/ncbi-tools++/objects/macro/Parse_src_org_choice.hpp +include/ncbi-tools++/objects/macro/Parse_src_org_choice_.hpp +include/ncbi-tools++/objects/macro/Partial_3_clear_constraint.hpp +include/ncbi-tools++/objects/macro/Partial_3_clear_constraint_.hpp +include/ncbi-tools++/objects/macro/Partial_3_set_action.hpp +include/ncbi-tools++/objects/macro/Partial_3_set_action_.hpp +include/ncbi-tools++/objects/macro/Partial_3_set_constraint.hpp +include/ncbi-tools++/objects/macro/Partial_3_set_constraint_.hpp +include/ncbi-tools++/objects/macro/Partial_5_clear_constraint.hpp +include/ncbi-tools++/objects/macro/Partial_5_clear_constraint_.hpp +include/ncbi-tools++/objects/macro/Partial_5_set_action.hpp +include/ncbi-tools++/objects/macro/Partial_5_set_action_.hpp +include/ncbi-tools++/objects/macro/Partial_5_set_constraint.hpp +include/ncbi-tools++/objects/macro/Partial_5_set_constraint_.hpp +include/ncbi-tools++/objects/macro/Partial_both_clear_constra.hpp +include/ncbi-tools++/objects/macro/Partial_both_clear_constra_.hpp +include/ncbi-tools++/objects/macro/Partial_both_set_action.hpp +include/ncbi-tools++/objects/macro/Partial_both_set_action_.hpp +include/ncbi-tools++/objects/macro/Partial_both_set_constrain.hpp +include/ncbi-tools++/objects/macro/Partial_both_set_constrain_.hpp +include/ncbi-tools++/objects/macro/Partial_constraint.hpp +include/ncbi-tools++/objects/macro/Partial_constraint_.hpp +include/ncbi-tools++/objects/macro/Pub_field_constraint.hpp +include/ncbi-tools++/objects/macro/Pub_field_constraint_.hpp +include/ncbi-tools++/objects/macro/Pub_field_speci_const_type.hpp +include/ncbi-tools++/objects/macro/Pub_field_speci_const_type_.hpp +include/ncbi-tools++/objects/macro/Pub_field_special_constrai.hpp +include/ncbi-tools++/objects/macro/Pub_field_special_constrai_.hpp +include/ncbi-tools++/objects/macro/Pub_type.hpp +include/ncbi-tools++/objects/macro/Pub_type_.hpp +include/ncbi-tools++/objects/macro/Publication_constraint.hpp +include/ncbi-tools++/objects/macro/Publication_constraint_.hpp +include/ncbi-tools++/objects/macro/Publication_field.hpp +include/ncbi-tools++/objects/macro/Publication_field_.hpp +include/ncbi-tools++/objects/macro/Quantity_constraint.hpp +include/ncbi-tools++/objects/macro/Quantity_constraint_.hpp +include/ncbi-tools++/objects/macro/Region_type.hpp +include/ncbi-tools++/objects/macro/Region_type_.hpp +include/ncbi-tools++/objects/macro/Remov_duplic_featur_action.hpp +include/ncbi-tools++/objects/macro/Remov_duplic_featur_action_.hpp +include/ncbi-tools++/objects/macro/Remove_action.hpp +include/ncbi-tools++/objects/macro/Remove_action_.hpp +include/ncbi-tools++/objects/macro/Remove_descriptor_action.hpp +include/ncbi-tools++/objects/macro/Remove_descriptor_action_.hpp +include/ncbi-tools++/objects/macro/Remove_feature_action.hpp +include/ncbi-tools++/objects/macro/Remove_feature_action_.hpp +include/ncbi-tools++/objects/macro/Remove_outside_action.hpp +include/ncbi-tools++/objects/macro/Remove_outside_action_.hpp +include/ncbi-tools++/objects/macro/Remove_sequences_action.hpp +include/ncbi-tools++/objects/macro/Remove_sequences_action_.hpp +include/ncbi-tools++/objects/macro/Remove_xrefs_action.hpp +include/ncbi-tools++/objects/macro/Remove_xrefs_action_.hpp +include/ncbi-tools++/objects/macro/Replace_func.hpp +include/ncbi-tools++/objects/macro/Replace_func_.hpp +include/ncbi-tools++/objects/macro/Replace_rule.hpp +include/ncbi-tools++/objects/macro/Replace_rule_.hpp +include/ncbi-tools++/objects/macro/Retranslate_cds_action.hpp +include/ncbi-tools++/objects/macro/Retranslate_cds_action_.hpp +include/ncbi-tools++/objects/macro/Rna_feat_type.hpp +include/ncbi-tools++/objects/macro/Rna_feat_type_.hpp +include/ncbi-tools++/objects/macro/Rna_field.hpp +include/ncbi-tools++/objects/macro/Rna_field_.hpp +include/ncbi-tools++/objects/macro/Rna_qual.hpp +include/ncbi-tools++/objects/macro/Rna_qual_.hpp +include/ncbi-tools++/objects/macro/Rna_qual_pair.hpp +include/ncbi-tools++/objects/macro/Rna_qual_pair_.hpp +include/ncbi-tools++/objects/macro/Search_func.hpp +include/ncbi-tools++/objects/macro/Search_func_.hpp +include/ncbi-tools++/objects/macro/Seqtype_constraint.hpp +include/ncbi-tools++/objects/macro/Seqtype_constraint_.hpp +include/ncbi-tools++/objects/macro/Seque_const_mol_type_const.hpp +include/ncbi-tools++/objects/macro/Seque_const_mol_type_const_.hpp +include/ncbi-tools++/objects/macro/Sequence_constraint.hpp +include/ncbi-tools++/objects/macro/Sequence_constraint_.hpp +include/ncbi-tools++/objects/macro/Sequence_constraint_rnamol.hpp +include/ncbi-tools++/objects/macro/Sequence_constraint_rnamol_.hpp +include/ncbi-tools++/objects/macro/Sequence_list.hpp +include/ncbi-tools++/objects/macro/Sequence_list_.hpp +include/ncbi-tools++/objects/macro/Sequence_list_choice.hpp +include/ncbi-tools++/objects/macro/Sequence_list_choice_.hpp +include/ncbi-tools++/objects/macro/Simple_replace.hpp +include/ncbi-tools++/objects/macro/Simple_replace_.hpp +include/ncbi-tools++/objects/macro/Site_type.hpp +include/ncbi-tools++/objects/macro/Site_type_.hpp +include/ncbi-tools++/objects/macro/Sort_fields_action.hpp +include/ncbi-tools++/objects/macro/Sort_fields_action_.hpp +include/ncbi-tools++/objects/macro/Sort_order.hpp +include/ncbi-tools++/objects/macro/Sort_order_.hpp +include/ncbi-tools++/objects/macro/Source_constraint.hpp +include/ncbi-tools++/objects/macro/Source_constraint_.hpp +include/ncbi-tools++/objects/macro/Source_location.hpp +include/ncbi-tools++/objects/macro/Source_location_.hpp +include/ncbi-tools++/objects/macro/Source_origin.hpp +include/ncbi-tools++/objects/macro/Source_origin_.hpp +include/ncbi-tools++/objects/macro/Source_qual.hpp +include/ncbi-tools++/objects/macro/Source_qual_.hpp +include/ncbi-tools++/objects/macro/Source_qual_choice.hpp +include/ncbi-tools++/objects/macro/Source_qual_choice_.hpp +include/ncbi-tools++/objects/macro/Source_qual_pair.hpp +include/ncbi-tools++/objects/macro/Source_qual_pair_.hpp +include/ncbi-tools++/objects/macro/Source_qual_text_val.hpp +include/ncbi-tools++/objects/macro/Source_qual_text_val_.hpp +include/ncbi-tools++/objects/macro/Source_qual_val_choice.hpp +include/ncbi-tools++/objects/macro/Source_qual_val_choice_.hpp +include/ncbi-tools++/objects/macro/Source_qual_val_set.hpp +include/ncbi-tools++/objects/macro/Source_qual_val_set_.hpp +include/ncbi-tools++/objects/macro/Strand_constraint.hpp +include/ncbi-tools++/objects/macro/Strand_constraint_.hpp +include/ncbi-tools++/objects/macro/Strand_type.hpp +include/ncbi-tools++/objects/macro/Strand_type_.hpp +include/ncbi-tools++/objects/macro/String_constraint.hpp +include/ncbi-tools++/objects/macro/String_constraint_.hpp +include/ncbi-tools++/objects/macro/String_constraint_set.hpp +include/ncbi-tools++/objects/macro/String_constraint_set_.hpp +include/ncbi-tools++/objects/macro/String_location.hpp +include/ncbi-tools++/objects/macro/String_location_.hpp +include/ncbi-tools++/objects/macro/Structu_comment_field_pair.hpp +include/ncbi-tools++/objects/macro/Structu_comment_field_pair_.hpp +include/ncbi-tools++/objects/macro/Structured_comment_field.hpp +include/ncbi-tools++/objects/macro/Structured_comment_field_.hpp +include/ncbi-tools++/objects/macro/Suspect_rule.hpp +include/ncbi-tools++/objects/macro/Suspect_rule_.hpp +include/ncbi-tools++/objects/macro/Suspect_rule_set.hpp +include/ncbi-tools++/objects/macro/Suspect_rule_set_.hpp +include/ncbi-tools++/objects/macro/Swap_action.hpp +include/ncbi-tools++/objects/macro/Swap_action_.hpp +include/ncbi-tools++/objects/macro/Table_match.hpp +include/ncbi-tools++/objects/macro/Table_match_.hpp +include/ncbi-tools++/objects/macro/Table_match_type.hpp +include/ncbi-tools++/objects/macro/Table_match_type_.hpp +include/ncbi-tools++/objects/macro/Technique_type.hpp +include/ncbi-tools++/objects/macro/Technique_type_.hpp +include/ncbi-tools++/objects/macro/Text_marker.hpp +include/ncbi-tools++/objects/macro/Text_marker_.hpp +include/ncbi-tools++/objects/macro/Text_portion.hpp +include/ncbi-tools++/objects/macro/Text_portion_.hpp +include/ncbi-tools++/objects/macro/Text_transform.hpp +include/ncbi-tools++/objects/macro/Text_transform_.hpp +include/ncbi-tools++/objects/macro/Text_transform_set.hpp +include/ncbi-tools++/objects/macro/Text_transform_set_.hpp +include/ncbi-tools++/objects/macro/Topology_type.hpp +include/ncbi-tools++/objects/macro/Topology_type_.hpp +include/ncbi-tools++/objects/macro/Translation_constraint.hpp +include/ncbi-tools++/objects/macro/Translation_constraint_.hpp +include/ncbi-tools++/objects/macro/Truncate_ends_partial_type.hpp +include/ncbi-tools++/objects/macro/Truncate_ends_partial_type_.hpp +include/ncbi-tools++/objects/macro/Updat_repla_ec_numbe_actio.hpp +include/ncbi-tools++/objects/macro/Updat_repla_ec_numbe_actio_.hpp +include/ncbi-tools++/objects/macro/Update_sequences_action.hpp +include/ncbi-tools++/objects/macro/Update_sequences_action_.hpp +include/ncbi-tools++/objects/macro/Word_substitution.hpp +include/ncbi-tools++/objects/macro/Word_substitution_.hpp +include/ncbi-tools++/objects/macro/Word_substitution_set.hpp +include/ncbi-tools++/objects/macro/Word_substitution_set_.hpp +include/ncbi-tools++/objects/macro/Xref_type.hpp +include/ncbi-tools++/objects/macro/Xref_type_.hpp +include/ncbi-tools++/objects/macro/macro__.hpp +include/ncbi-tools++/objects/medlars/.cvsignore +include/ncbi-tools++/objects/medlars/.gitignore +include/ncbi-tools++/objects/medlars/Medlars_entry.hpp +include/ncbi-tools++/objects/medlars/Medlars_entry_.hpp +include/ncbi-tools++/objects/medlars/Medlars_record.hpp +include/ncbi-tools++/objects/medlars/Medlars_record_.hpp +include/ncbi-tools++/objects/medlars/NCBI_Medlars_module.hpp +include/ncbi-tools++/objects/medlars/medlars__.hpp +include/ncbi-tools++/objects/medline/.cvsignore +include/ncbi-tools++/objects/medline/.gitignore +include/ncbi-tools++/objects/medline/DocRef.hpp +include/ncbi-tools++/objects/medline/DocRef_.hpp +include/ncbi-tools++/objects/medline/Medline_entry.hpp +include/ncbi-tools++/objects/medline/Medline_entry_.hpp +include/ncbi-tools++/objects/medline/Medline_field.hpp +include/ncbi-tools++/objects/medline/Medline_field_.hpp +include/ncbi-tools++/objects/medline/Medline_mesh.hpp +include/ncbi-tools++/objects/medline/Medline_mesh_.hpp +include/ncbi-tools++/objects/medline/Medline_qual.hpp +include/ncbi-tools++/objects/medline/Medline_qual_.hpp +include/ncbi-tools++/objects/medline/Medline_rn.hpp +include/ncbi-tools++/objects/medline/Medline_rn_.hpp +include/ncbi-tools++/objects/medline/Medline_si.hpp +include/ncbi-tools++/objects/medline/Medline_si_.hpp +include/ncbi-tools++/objects/medline/NCBI_Medline_module.hpp +include/ncbi-tools++/objects/medline/medline__.hpp +include/ncbi-tools++/objects/mim/.cvsignore +include/ncbi-tools++/objects/mim/.gitignore +include/ncbi-tools++/objects/mim/Mim_allelic_variant.hpp +include/ncbi-tools++/objects/mim/Mim_allelic_variant_.hpp +include/ncbi-tools++/objects/mim/Mim_author.hpp +include/ncbi-tools++/objects/mim/Mim_author_.hpp +include/ncbi-tools++/objects/mim/Mim_cit.hpp +include/ncbi-tools++/objects/mim/Mim_cit_.hpp +include/ncbi-tools++/objects/mim/Mim_date.hpp +include/ncbi-tools++/objects/mim/Mim_date_.hpp +include/ncbi-tools++/objects/mim/Mim_edit_item.hpp +include/ncbi-tools++/objects/mim/Mim_edit_item_.hpp +include/ncbi-tools++/objects/mim/Mim_entries.hpp +include/ncbi-tools++/objects/mim/Mim_entries_.hpp +include/ncbi-tools++/objects/mim/Mim_entry.hpp +include/ncbi-tools++/objects/mim/Mim_entry_.hpp +include/ncbi-tools++/objects/mim/Mim_index_term.hpp +include/ncbi-tools++/objects/mim/Mim_index_term_.hpp +include/ncbi-tools++/objects/mim/Mim_link.hpp +include/ncbi-tools++/objects/mim/Mim_link_.hpp +include/ncbi-tools++/objects/mim/Mim_page.hpp +include/ncbi-tools++/objects/mim/Mim_page_.hpp +include/ncbi-tools++/objects/mim/Mim_reference.hpp +include/ncbi-tools++/objects/mim/Mim_reference_.hpp +include/ncbi-tools++/objects/mim/Mim_set.hpp +include/ncbi-tools++/objects/mim/Mim_set_.hpp +include/ncbi-tools++/objects/mim/Mim_text.hpp +include/ncbi-tools++/objects/mim/Mim_text_.hpp +include/ncbi-tools++/objects/mim/NCBI_Mim_module.hpp +include/ncbi-tools++/objects/mim/mim__.hpp +include/ncbi-tools++/objects/misc/error_codes.hpp +include/ncbi-tools++/objects/misc/sequence_macros.hpp +include/ncbi-tools++/objects/misc/sequence_util_macros.hpp +include/ncbi-tools++/objects/mla/.cvsignore +include/ncbi-tools++/objects/mla/.gitignore +include/ncbi-tools++/objects/mla/Error_val.hpp +include/ncbi-tools++/objects/mla/Error_val_.hpp +include/ncbi-tools++/objects/mla/Mla_back.hpp +include/ncbi-tools++/objects/mla/Mla_back_.hpp +include/ncbi-tools++/objects/mla/Mla_request.hpp +include/ncbi-tools++/objects/mla/Mla_request_.hpp +include/ncbi-tools++/objects/mla/NCBI_MedArchive_module.hpp +include/ncbi-tools++/objects/mla/Title_msg.hpp +include/ncbi-tools++/objects/mla/Title_msg_.hpp +include/ncbi-tools++/objects/mla/Title_msg_list.hpp +include/ncbi-tools++/objects/mla/Title_msg_list_.hpp +include/ncbi-tools++/objects/mla/Title_type.hpp +include/ncbi-tools++/objects/mla/Title_type_.hpp +include/ncbi-tools++/objects/mla/mla__.hpp +include/ncbi-tools++/objects/mla/mla_client.hpp +include/ncbi-tools++/objects/mla/mla_client_.hpp +include/ncbi-tools++/objects/mmdb1/.cvsignore +include/ncbi-tools++/objects/mmdb1/.gitignore +include/ncbi-tools++/objects/mmdb1/Atom.hpp +include/ncbi-tools++/objects/mmdb1/Atom_.hpp +include/ncbi-tools++/objects/mmdb1/Atom_id.hpp +include/ncbi-tools++/objects/mmdb1/Atom_id_.hpp +include/ncbi-tools++/objects/mmdb1/Atom_pntr.hpp +include/ncbi-tools++/objects/mmdb1/Atom_pntr_.hpp +include/ncbi-tools++/objects/mmdb1/Atom_pntr_set.hpp +include/ncbi-tools++/objects/mmdb1/Atom_pntr_set_.hpp +include/ncbi-tools++/objects/mmdb1/Biomol_descr.hpp +include/ncbi-tools++/objects/mmdb1/Biomol_descr_.hpp +include/ncbi-tools++/objects/mmdb1/Biost_resid_graph_set_pntr.hpp +include/ncbi-tools++/objects/mmdb1/Biost_resid_graph_set_pntr_.hpp +include/ncbi-tools++/objects/mmdb1/Biostruc.hpp +include/ncbi-tools++/objects/mmdb1/Biostruc_.hpp +include/ncbi-tools++/objects/mmdb1/Biostruc_annot_set.hpp +include/ncbi-tools++/objects/mmdb1/Biostruc_annot_set_.hpp +include/ncbi-tools++/objects/mmdb1/Biostruc_descr.hpp +include/ncbi-tools++/objects/mmdb1/Biostruc_descr_.hpp +include/ncbi-tools++/objects/mmdb1/Biostruc_graph.hpp +include/ncbi-tools++/objects/mmdb1/Biostruc_graph_.hpp +include/ncbi-tools++/objects/mmdb1/Biostruc_graph_pntr.hpp +include/ncbi-tools++/objects/mmdb1/Biostruc_graph_pntr_.hpp +include/ncbi-tools++/objects/mmdb1/Biostruc_history.hpp +include/ncbi-tools++/objects/mmdb1/Biostruc_history_.hpp +include/ncbi-tools++/objects/mmdb1/Biostruc_id.hpp +include/ncbi-tools++/objects/mmdb1/Biostruc_id_.hpp +include/ncbi-tools++/objects/mmdb1/Biostruc_replace.hpp +include/ncbi-tools++/objects/mmdb1/Biostruc_replace_.hpp +include/ncbi-tools++/objects/mmdb1/Biostruc_residue_graph_set.hpp +include/ncbi-tools++/objects/mmdb1/Biostruc_residue_graph_set_.hpp +include/ncbi-tools++/objects/mmdb1/Biostruc_set.hpp +include/ncbi-tools++/objects/mmdb1/Biostruc_set_.hpp +include/ncbi-tools++/objects/mmdb1/Biostruc_source.hpp +include/ncbi-tools++/objects/mmdb1/Biostruc_source_.hpp +include/ncbi-tools++/objects/mmdb1/Chiral_center.hpp +include/ncbi-tools++/objects/mmdb1/Chiral_center_.hpp +include/ncbi-tools++/objects/mmdb1/Inter_residue_bond.hpp +include/ncbi-tools++/objects/mmdb1/Inter_residue_bond_.hpp +include/ncbi-tools++/objects/mmdb1/Intra_residue_bond.hpp +include/ncbi-tools++/objects/mmdb1/Intra_residue_bond_.hpp +include/ncbi-tools++/objects/mmdb1/MMDB_Chemical_graph_module.hpp +include/ncbi-tools++/objects/mmdb1/MMDB_module.hpp +include/ncbi-tools++/objects/mmdb1/Mmdb_id.hpp +include/ncbi-tools++/objects/mmdb1/Mmdb_id_.hpp +include/ncbi-tools++/objects/mmdb1/Molecule_graph.hpp +include/ncbi-tools++/objects/mmdb1/Molecule_graph_.hpp +include/ncbi-tools++/objects/mmdb1/Molecule_id.hpp +include/ncbi-tools++/objects/mmdb1/Molecule_id_.hpp +include/ncbi-tools++/objects/mmdb1/PCSubstance_id.hpp +include/ncbi-tools++/objects/mmdb1/PCSubstance_id_.hpp +include/ncbi-tools++/objects/mmdb1/Residue.hpp +include/ncbi-tools++/objects/mmdb1/Residue_.hpp +include/ncbi-tools++/objects/mmdb1/Residue_graph.hpp +include/ncbi-tools++/objects/mmdb1/Residue_graph_.hpp +include/ncbi-tools++/objects/mmdb1/Residue_graph_id.hpp +include/ncbi-tools++/objects/mmdb1/Residue_graph_id_.hpp +include/ncbi-tools++/objects/mmdb1/Residue_graph_pntr.hpp +include/ncbi-tools++/objects/mmdb1/Residue_graph_pntr_.hpp +include/ncbi-tools++/objects/mmdb1/Residue_id.hpp +include/ncbi-tools++/objects/mmdb1/Residue_id_.hpp +include/ncbi-tools++/objects/mmdb1/mmdb1__.hpp +include/ncbi-tools++/objects/mmdb2/.cvsignore +include/ncbi-tools++/objects/mmdb2/.gitignore +include/ncbi-tools++/objects/mmdb2/Alternate_conformation_id.hpp +include/ncbi-tools++/objects/mmdb2/Alternate_conformation_id_.hpp +include/ncbi-tools++/objects/mmdb2/Alternate_conformation_ids.hpp +include/ncbi-tools++/objects/mmdb2/Alternate_conformation_ids_.hpp +include/ncbi-tools++/objects/mmdb2/Anisotro_temperatu_factors.hpp +include/ncbi-tools++/objects/mmdb2/Anisotro_temperatu_factors_.hpp +include/ncbi-tools++/objects/mmdb2/Atomic_coordinates.hpp +include/ncbi-tools++/objects/mmdb2/Atomic_coordinates_.hpp +include/ncbi-tools++/objects/mmdb2/Atomic_occupancies.hpp +include/ncbi-tools++/objects/mmdb2/Atomic_occupancies_.hpp +include/ncbi-tools++/objects/mmdb2/Atomic_temperature_factors.hpp +include/ncbi-tools++/objects/mmdb2/Atomic_temperature_factors_.hpp +include/ncbi-tools++/objects/mmdb2/Biostruc_model.hpp +include/ncbi-tools++/objects/mmdb2/Biostruc_model_.hpp +include/ncbi-tools++/objects/mmdb2/Conformation_ensemble.hpp +include/ncbi-tools++/objects/mmdb2/Conformation_ensemble_.hpp +include/ncbi-tools++/objects/mmdb2/Coordinates.hpp +include/ncbi-tools++/objects/mmdb2/Coordinates_.hpp +include/ncbi-tools++/objects/mmdb2/Density_coordinates.hpp +include/ncbi-tools++/objects/mmdb2/Density_coordinates_.hpp +include/ncbi-tools++/objects/mmdb2/Isotropi_temperatu_factors.hpp +include/ncbi-tools++/objects/mmdb2/Isotropi_temperatu_factors_.hpp +include/ncbi-tools++/objects/mmdb2/MMDB_Structural_model_module.hpp +include/ncbi-tools++/objects/mmdb2/Model_coordinate_set.hpp +include/ncbi-tools++/objects/mmdb2/Model_coordinate_set_.hpp +include/ncbi-tools++/objects/mmdb2/Model_coordinate_set_id.hpp +include/ncbi-tools++/objects/mmdb2/Model_coordinate_set_id_.hpp +include/ncbi-tools++/objects/mmdb2/Model_descr.hpp +include/ncbi-tools++/objects/mmdb2/Model_descr_.hpp +include/ncbi-tools++/objects/mmdb2/Model_id.hpp +include/ncbi-tools++/objects/mmdb2/Model_id_.hpp +include/ncbi-tools++/objects/mmdb2/Model_space.hpp +include/ncbi-tools++/objects/mmdb2/Model_space_.hpp +include/ncbi-tools++/objects/mmdb2/Model_space_points.hpp +include/ncbi-tools++/objects/mmdb2/Model_space_points_.hpp +include/ncbi-tools++/objects/mmdb2/Model_type.hpp +include/ncbi-tools++/objects/mmdb2/Model_type_.hpp +include/ncbi-tools++/objects/mmdb2/Reference_frame.hpp +include/ncbi-tools++/objects/mmdb2/Reference_frame_.hpp +include/ncbi-tools++/objects/mmdb2/Surface_coordinates.hpp +include/ncbi-tools++/objects/mmdb2/Surface_coordinates_.hpp +include/ncbi-tools++/objects/mmdb2/T_mesh.hpp +include/ncbi-tools++/objects/mmdb2/T_mesh_.hpp +include/ncbi-tools++/objects/mmdb2/Triangles.hpp +include/ncbi-tools++/objects/mmdb2/Triangles_.hpp +include/ncbi-tools++/objects/mmdb2/mmdb2__.hpp +include/ncbi-tools++/objects/mmdb3/.cvsignore +include/ncbi-tools++/objects/mmdb3/.gitignore +include/ncbi-tools++/objects/mmdb3/Align_stats.hpp +include/ncbi-tools++/objects/mmdb3/Align_stats_.hpp +include/ncbi-tools++/objects/mmdb3/Atom_pntrs.hpp +include/ncbi-tools++/objects/mmdb3/Atom_pntrs_.hpp +include/ncbi-tools++/objects/mmdb3/Biostruc_feature.hpp +include/ncbi-tools++/objects/mmdb3/Biostruc_feature_.hpp +include/ncbi-tools++/objects/mmdb3/Biostruc_feature_id.hpp +include/ncbi-tools++/objects/mmdb3/Biostruc_feature_id_.hpp +include/ncbi-tools++/objects/mmdb3/Biostruc_feature_set.hpp +include/ncbi-tools++/objects/mmdb3/Biostruc_feature_set_.hpp +include/ncbi-tools++/objects/mmdb3/Biostruc_feature_set_descr.hpp +include/ncbi-tools++/objects/mmdb3/Biostruc_feature_set_descr_.hpp +include/ncbi-tools++/objects/mmdb3/Biostruc_feature_set_id.hpp +include/ncbi-tools++/objects/mmdb3/Biostruc_feature_set_id_.hpp +include/ncbi-tools++/objects/mmdb3/Biostruc_molecule_pntr.hpp +include/ncbi-tools++/objects/mmdb3/Biostruc_molecule_pntr_.hpp +include/ncbi-tools++/objects/mmdb3/Biostruc_script.hpp +include/ncbi-tools++/objects/mmdb3/Biostruc_script_.hpp +include/ncbi-tools++/objects/mmdb3/Biostruc_script_step.hpp +include/ncbi-tools++/objects/mmdb3/Biostruc_script_step_.hpp +include/ncbi-tools++/objects/mmdb3/Brick.hpp +include/ncbi-tools++/objects/mmdb3/Brick_.hpp +include/ncbi-tools++/objects/mmdb3/Camera.hpp +include/ncbi-tools++/objects/mmdb3/Camera_.hpp +include/ncbi-tools++/objects/mmdb3/Chem_graph_alignment.hpp +include/ncbi-tools++/objects/mmdb3/Chem_graph_alignment_.hpp +include/ncbi-tools++/objects/mmdb3/Chem_graph_interaction.hpp +include/ncbi-tools++/objects/mmdb3/Chem_graph_interaction_.hpp +include/ncbi-tools++/objects/mmdb3/Chem_graph_pntrs.hpp +include/ncbi-tools++/objects/mmdb3/Chem_graph_pntrs_.hpp +include/ncbi-tools++/objects/mmdb3/Color_prop.hpp +include/ncbi-tools++/objects/mmdb3/Color_prop_.hpp +include/ncbi-tools++/objects/mmdb3/Cone.hpp +include/ncbi-tools++/objects/mmdb3/Cone_.hpp +include/ncbi-tools++/objects/mmdb3/Cylinder.hpp +include/ncbi-tools++/objects/mmdb3/Cylinder_.hpp +include/ncbi-tools++/objects/mmdb3/GL_matrix.hpp +include/ncbi-tools++/objects/mmdb3/GL_matrix_.hpp +include/ncbi-tools++/objects/mmdb3/MMDB_Features_module.hpp +include/ncbi-tools++/objects/mmdb3/Model_space_point.hpp +include/ncbi-tools++/objects/mmdb3/Model_space_point_.hpp +include/ncbi-tools++/objects/mmdb3/Molecule_pntrs.hpp +include/ncbi-tools++/objects/mmdb3/Molecule_pntrs_.hpp +include/ncbi-tools++/objects/mmdb3/Move.hpp +include/ncbi-tools++/objects/mmdb3/Move_.hpp +include/ncbi-tools++/objects/mmdb3/Other_feature.hpp +include/ncbi-tools++/objects/mmdb3/Other_feature_.hpp +include/ncbi-tools++/objects/mmdb3/RealValue.hpp +include/ncbi-tools++/objects/mmdb3/RealValue_.hpp +include/ncbi-tools++/objects/mmdb3/Region_boundary.hpp +include/ncbi-tools++/objects/mmdb3/Region_boundary_.hpp +include/ncbi-tools++/objects/mmdb3/Region_coordinates.hpp +include/ncbi-tools++/objects/mmdb3/Region_coordinates_.hpp +include/ncbi-tools++/objects/mmdb3/Region_pntrs.hpp +include/ncbi-tools++/objects/mmdb3/Region_pntrs_.hpp +include/ncbi-tools++/objects/mmdb3/Region_similarity.hpp +include/ncbi-tools++/objects/mmdb3/Region_similarity_.hpp +include/ncbi-tools++/objects/mmdb3/Render_prop.hpp +include/ncbi-tools++/objects/mmdb3/Render_prop_.hpp +include/ncbi-tools++/objects/mmdb3/Residue_explicit_pntrs.hpp +include/ncbi-tools++/objects/mmdb3/Residue_explicit_pntrs_.hpp +include/ncbi-tools++/objects/mmdb3/Residue_interval_pntr.hpp +include/ncbi-tools++/objects/mmdb3/Residue_interval_pntr_.hpp +include/ncbi-tools++/objects/mmdb3/Residue_pntrs.hpp +include/ncbi-tools++/objects/mmdb3/Residue_pntrs_.hpp +include/ncbi-tools++/objects/mmdb3/Rot_matrix.hpp +include/ncbi-tools++/objects/mmdb3/Rot_matrix_.hpp +include/ncbi-tools++/objects/mmdb3/Sphere.hpp +include/ncbi-tools++/objects/mmdb3/Sphere_.hpp +include/ncbi-tools++/objects/mmdb3/Step_id.hpp +include/ncbi-tools++/objects/mmdb3/Step_id_.hpp +include/ncbi-tools++/objects/mmdb3/Trans_matrix.hpp +include/ncbi-tools++/objects/mmdb3/Trans_matrix_.hpp +include/ncbi-tools++/objects/mmdb3/Transform.hpp +include/ncbi-tools++/objects/mmdb3/Transform_.hpp +include/ncbi-tools++/objects/mmdb3/mmdb3__.hpp +include/ncbi-tools++/objects/ncbimime/.cvsignore +include/ncbi-tools++/objects/ncbimime/.gitignore +include/ncbi-tools++/objects/ncbimime/Biostruc_align.hpp +include/ncbi-tools++/objects/ncbimime/Biostruc_align_.hpp +include/ncbi-tools++/objects/ncbimime/Biostruc_align_seq.hpp +include/ncbi-tools++/objects/ncbimime/Biostruc_align_seq_.hpp +include/ncbi-tools++/objects/ncbimime/Biostruc_seq.hpp +include/ncbi-tools++/objects/ncbimime/Biostruc_seq_.hpp +include/ncbi-tools++/objects/ncbimime/Biostruc_seqs.hpp +include/ncbi-tools++/objects/ncbimime/Biostruc_seqs_.hpp +include/ncbi-tools++/objects/ncbimime/Biostruc_seqs_aligns_cdd.hpp +include/ncbi-tools++/objects/ncbimime/Biostruc_seqs_aligns_cdd_.hpp +include/ncbi-tools++/objects/ncbimime/Bundle_seqs_aligns.hpp +include/ncbi-tools++/objects/ncbimime/Bundle_seqs_aligns_.hpp +include/ncbi-tools++/objects/ncbimime/Entrez_general.hpp +include/ncbi-tools++/objects/ncbimime/Entrez_general_.hpp +include/ncbi-tools++/objects/ncbimime/Entrez_style.hpp +include/ncbi-tools++/objects/ncbimime/Entrez_style_.hpp +include/ncbi-tools++/objects/ncbimime/NCBI_Mime_module.hpp +include/ncbi-tools++/objects/ncbimime/Ncbi_mime_asn1.hpp +include/ncbi-tools++/objects/ncbimime/Ncbi_mime_asn1_.hpp +include/ncbi-tools++/objects/ncbimime/ncbimime__.hpp +include/ncbi-tools++/objects/objprt/.cvsignore +include/ncbi-tools++/objects/objprt/.gitignore +include/ncbi-tools++/objects/objprt/NCBI_ObjPrt_module.hpp +include/ncbi-tools++/objects/objprt/PrintForm.hpp +include/ncbi-tools++/objects/objprt/PrintFormBlock.hpp +include/ncbi-tools++/objects/objprt/PrintFormBlock_.hpp +include/ncbi-tools++/objects/objprt/PrintFormBoolean.hpp +include/ncbi-tools++/objects/objprt/PrintFormBoolean_.hpp +include/ncbi-tools++/objects/objprt/PrintFormEnum.hpp +include/ncbi-tools++/objects/objprt/PrintFormEnum_.hpp +include/ncbi-tools++/objects/objprt/PrintFormText.hpp +include/ncbi-tools++/objects/objprt/PrintFormText_.hpp +include/ncbi-tools++/objects/objprt/PrintForm_.hpp +include/ncbi-tools++/objects/objprt/PrintFormat.hpp +include/ncbi-tools++/objects/objprt/PrintFormat_.hpp +include/ncbi-tools++/objects/objprt/PrintTemplate.hpp +include/ncbi-tools++/objects/objprt/PrintTemplateSet.hpp +include/ncbi-tools++/objects/objprt/PrintTemplateSet_.hpp +include/ncbi-tools++/objects/objprt/PrintTemplate_.hpp +include/ncbi-tools++/objects/objprt/TemplateName.hpp +include/ncbi-tools++/objects/objprt/TemplateName_.hpp +include/ncbi-tools++/objects/objprt/UserFormat.hpp +include/ncbi-tools++/objects/objprt/UserFormat_.hpp +include/ncbi-tools++/objects/objprt/objprt__.hpp +include/ncbi-tools++/objects/omssa/.cvsignore +include/ncbi-tools++/objects/omssa/.gitignore +include/ncbi-tools++/objects/omssa/MSBioseq.hpp +include/ncbi-tools++/objects/omssa/MSBioseqSet.hpp +include/ncbi-tools++/objects/omssa/MSBioseqSet_.hpp +include/ncbi-tools++/objects/omssa/MSBioseq_.hpp +include/ncbi-tools++/objects/omssa/MSCalcCharge.hpp +include/ncbi-tools++/objects/omssa/MSCalcCharge_.hpp +include/ncbi-tools++/objects/omssa/MSCalcPlusOne.hpp +include/ncbi-tools++/objects/omssa/MSCalcPlusOne_.hpp +include/ncbi-tools++/objects/omssa/MSChargeHandle.hpp +include/ncbi-tools++/objects/omssa/MSChargeHandle_.hpp +include/ncbi-tools++/objects/omssa/MSEnzymes.hpp +include/ncbi-tools++/objects/omssa/MSEnzymes_.hpp +include/ncbi-tools++/objects/omssa/MSHitError.hpp +include/ncbi-tools++/objects/omssa/MSHitError_.hpp +include/ncbi-tools++/objects/omssa/MSHitSet.hpp +include/ncbi-tools++/objects/omssa/MSHitSet_.hpp +include/ncbi-tools++/objects/omssa/MSHits.hpp +include/ncbi-tools++/objects/omssa/MSHits_.hpp +include/ncbi-tools++/objects/omssa/MSImmonium.hpp +include/ncbi-tools++/objects/omssa/MSImmonium_.hpp +include/ncbi-tools++/objects/omssa/MSInFile.hpp +include/ncbi-tools++/objects/omssa/MSInFile_.hpp +include/ncbi-tools++/objects/omssa/MSIon.hpp +include/ncbi-tools++/objects/omssa/MSIonAnnot.hpp +include/ncbi-tools++/objects/omssa/MSIonAnnot_.hpp +include/ncbi-tools++/objects/omssa/MSIonIsotopicType.hpp +include/ncbi-tools++/objects/omssa/MSIonIsotopicType_.hpp +include/ncbi-tools++/objects/omssa/MSIonNeutralLoss.hpp +include/ncbi-tools++/objects/omssa/MSIonNeutralLoss_.hpp +include/ncbi-tools++/objects/omssa/MSIonType.hpp +include/ncbi-tools++/objects/omssa/MSIonType_.hpp +include/ncbi-tools++/objects/omssa/MSIon_.hpp +include/ncbi-tools++/objects/omssa/MSIterativeSettings.hpp +include/ncbi-tools++/objects/omssa/MSIterativeSettings_.hpp +include/ncbi-tools++/objects/omssa/MSLibrarySettings.hpp +include/ncbi-tools++/objects/omssa/MSLibrarySettings_.hpp +include/ncbi-tools++/objects/omssa/MSMZHit.hpp +include/ncbi-tools++/objects/omssa/MSMZHit_.hpp +include/ncbi-tools++/objects/omssa/MSMassSet.hpp +include/ncbi-tools++/objects/omssa/MSMassSet_.hpp +include/ncbi-tools++/objects/omssa/MSMod.hpp +include/ncbi-tools++/objects/omssa/MSModHit.hpp +include/ncbi-tools++/objects/omssa/MSModHit_.hpp +include/ncbi-tools++/objects/omssa/MSModSpec.hpp +include/ncbi-tools++/objects/omssa/MSModSpecSet.hpp +include/ncbi-tools++/objects/omssa/MSModSpecSet_.hpp +include/ncbi-tools++/objects/omssa/MSModSpec_.hpp +include/ncbi-tools++/objects/omssa/MSModType.hpp +include/ncbi-tools++/objects/omssa/MSModType_.hpp +include/ncbi-tools++/objects/omssa/MSMod_.hpp +include/ncbi-tools++/objects/omssa/MSOutFile.hpp +include/ncbi-tools++/objects/omssa/MSOutFile_.hpp +include/ncbi-tools++/objects/omssa/MSPepHit.hpp +include/ncbi-tools++/objects/omssa/MSPepHit_.hpp +include/ncbi-tools++/objects/omssa/MSRequest.hpp +include/ncbi-tools++/objects/omssa/MSRequest_.hpp +include/ncbi-tools++/objects/omssa/MSResponse.hpp +include/ncbi-tools++/objects/omssa/MSResponseError.hpp +include/ncbi-tools++/objects/omssa/MSResponseError_.hpp +include/ncbi-tools++/objects/omssa/MSResponse_.hpp +include/ncbi-tools++/objects/omssa/MSScoreSet.hpp +include/ncbi-tools++/objects/omssa/MSScoreSet_.hpp +include/ncbi-tools++/objects/omssa/MSSearch.hpp +include/ncbi-tools++/objects/omssa/MSSearchSettings.hpp +include/ncbi-tools++/objects/omssa/MSSearchSettingsSet.hpp +include/ncbi-tools++/objects/omssa/MSSearchSettingsSet_.hpp +include/ncbi-tools++/objects/omssa/MSSearchSettings_.hpp +include/ncbi-tools++/objects/omssa/MSSearchType.hpp +include/ncbi-tools++/objects/omssa/MSSearchType_.hpp +include/ncbi-tools++/objects/omssa/MSSearch_.hpp +include/ncbi-tools++/objects/omssa/MSSerialDataFormat.hpp +include/ncbi-tools++/objects/omssa/MSSerialDataFormat_.hpp +include/ncbi-tools++/objects/omssa/MSSpectrum.hpp +include/ncbi-tools++/objects/omssa/MSSpectrumFileType.hpp +include/ncbi-tools++/objects/omssa/MSSpectrumFileType_.hpp +include/ncbi-tools++/objects/omssa/MSSpectrum_.hpp +include/ncbi-tools++/objects/omssa/MSSpectrumset.hpp +include/ncbi-tools++/objects/omssa/MSSpectrumset_.hpp +include/ncbi-tools++/objects/omssa/MSUserAnnot.hpp +include/ncbi-tools++/objects/omssa/MSUserAnnot_.hpp +include/ncbi-tools++/objects/omssa/MSZdependence.hpp +include/ncbi-tools++/objects/omssa/MSZdependence_.hpp +include/ncbi-tools++/objects/omssa/NameValue.hpp +include/ncbi-tools++/objects/omssa/NameValue_.hpp +include/ncbi-tools++/objects/omssa/OMSSA_module.hpp +include/ncbi-tools++/objects/omssa/omssa__.hpp +include/ncbi-tools++/objects/pcassay/.cvsignore +include/ncbi-tools++/objects/pcassay/.gitignore +include/ncbi-tools++/objects/pcassay/NCBI_PCAssay_module.hpp +include/ncbi-tools++/objects/pcassay/PC_AnnotatedXRef.hpp +include/ncbi-tools++/objects/pcassay/PC_AnnotatedXRef_.hpp +include/ncbi-tools++/objects/pcassay/PC_AssayContainer.hpp +include/ncbi-tools++/objects/pcassay/PC_AssayContainer_.hpp +include/ncbi-tools++/objects/pcassay/PC_AssayDRAttr.hpp +include/ncbi-tools++/objects/pcassay/PC_AssayDRAttr_.hpp +include/ncbi-tools++/objects/pcassay/PC_AssayData.hpp +include/ncbi-tools++/objects/pcassay/PC_AssayData_.hpp +include/ncbi-tools++/objects/pcassay/PC_AssayDescription.hpp +include/ncbi-tools++/objects/pcassay/PC_AssayDescription_.hpp +include/ncbi-tools++/objects/pcassay/PC_AssayPanel.hpp +include/ncbi-tools++/objects/pcassay/PC_AssayPanelMember.hpp +include/ncbi-tools++/objects/pcassay/PC_AssayPanelMember_.hpp +include/ncbi-tools++/objects/pcassay/PC_AssayPanelTestResult.hpp +include/ncbi-tools++/objects/pcassay/PC_AssayPanelTestResult_.hpp +include/ncbi-tools++/objects/pcassay/PC_AssayPanel_.hpp +include/ncbi-tools++/objects/pcassay/PC_AssayResults.hpp +include/ncbi-tools++/objects/pcassay/PC_AssayResults_.hpp +include/ncbi-tools++/objects/pcassay/PC_AssaySubmit.hpp +include/ncbi-tools++/objects/pcassay/PC_AssaySubmit_.hpp +include/ncbi-tools++/objects/pcassay/PC_AssayTargetInfo.hpp +include/ncbi-tools++/objects/pcassay/PC_AssayTargetInfo_.hpp +include/ncbi-tools++/objects/pcassay/PC_CategorizedComment.hpp +include/ncbi-tools++/objects/pcassay/PC_CategorizedComment_.hpp +include/ncbi-tools++/objects/pcassay/PC_ConcentrationAttr.hpp +include/ncbi-tools++/objects/pcassay/PC_ConcentrationAttr_.hpp +include/ncbi-tools++/objects/pcassay/PC_IntegerMinMax.hpp +include/ncbi-tools++/objects/pcassay/PC_IntegerMinMax_.hpp +include/ncbi-tools++/objects/pcassay/PC_RealMinMax.hpp +include/ncbi-tools++/objects/pcassay/PC_RealMinMax_.hpp +include/ncbi-tools++/objects/pcassay/PC_ResultType.hpp +include/ncbi-tools++/objects/pcassay/PC_ResultType_.hpp +include/ncbi-tools++/objects/pcassay/pcassay__.hpp +include/ncbi-tools++/objects/pcsubstance/.cvsignore +include/ncbi-tools++/objects/pcsubstance/.gitignore +include/ncbi-tools++/objects/pcsubstance/NCBI_PCSubstance_module.hpp +include/ncbi-tools++/objects/pcsubstance/PC_AtomInt.hpp +include/ncbi-tools++/objects/pcsubstance/PC_AtomInt_.hpp +include/ncbi-tools++/objects/pcsubstance/PC_AtomRadical.hpp +include/ncbi-tools++/objects/pcsubstance/PC_AtomRadical_.hpp +include/ncbi-tools++/objects/pcsubstance/PC_AtomSource.hpp +include/ncbi-tools++/objects/pcsubstance/PC_AtomSource_.hpp +include/ncbi-tools++/objects/pcsubstance/PC_AtomString.hpp +include/ncbi-tools++/objects/pcsubstance/PC_AtomString_.hpp +include/ncbi-tools++/objects/pcsubstance/PC_Atoms.hpp +include/ncbi-tools++/objects/pcsubstance/PC_Atoms_.hpp +include/ncbi-tools++/objects/pcsubstance/PC_BondAnnotation.hpp +include/ncbi-tools++/objects/pcsubstance/PC_BondAnnotation_.hpp +include/ncbi-tools++/objects/pcsubstance/PC_BondType.hpp +include/ncbi-tools++/objects/pcsubstance/PC_BondType_.hpp +include/ncbi-tools++/objects/pcsubstance/PC_Bonds.hpp +include/ncbi-tools++/objects/pcsubstance/PC_Bonds_.hpp +include/ncbi-tools++/objects/pcsubstance/PC_Compound.hpp +include/ncbi-tools++/objects/pcsubstance/PC_CompoundType.hpp +include/ncbi-tools++/objects/pcsubstance/PC_CompoundType_.hpp +include/ncbi-tools++/objects/pcsubstance/PC_Compound_.hpp +include/ncbi-tools++/objects/pcsubstance/PC_Compounds.hpp +include/ncbi-tools++/objects/pcsubstance/PC_Compounds_.hpp +include/ncbi-tools++/objects/pcsubstance/PC_Conformer.hpp +include/ncbi-tools++/objects/pcsubstance/PC_Conformer_.hpp +include/ncbi-tools++/objects/pcsubstance/PC_Conformers.hpp +include/ncbi-tools++/objects/pcsubstance/PC_Conformers_.hpp +include/ncbi-tools++/objects/pcsubstance/PC_CoordinateType.hpp +include/ncbi-tools++/objects/pcsubstance/PC_CoordinateType_.hpp +include/ncbi-tools++/objects/pcsubstance/PC_Coordinates.hpp +include/ncbi-tools++/objects/pcsubstance/PC_Coordinates_.hpp +include/ncbi-tools++/objects/pcsubstance/PC_Count.hpp +include/ncbi-tools++/objects/pcsubstance/PC_Count_.hpp +include/ncbi-tools++/objects/pcsubstance/PC_DBTracking.hpp +include/ncbi-tools++/objects/pcsubstance/PC_DBTracking_.hpp +include/ncbi-tools++/objects/pcsubstance/PC_DrawAnnotations.hpp +include/ncbi-tools++/objects/pcsubstance/PC_DrawAnnotations_.hpp +include/ncbi-tools++/objects/pcsubstance/PC_Element.hpp +include/ncbi-tools++/objects/pcsubstance/PC_Element_.hpp +include/ncbi-tools++/objects/pcsubstance/PC_ID.hpp +include/ncbi-tools++/objects/pcsubstance/PC_ID_.hpp +include/ncbi-tools++/objects/pcsubstance/PC_InfoData.hpp +include/ncbi-tools++/objects/pcsubstance/PC_InfoData_.hpp +include/ncbi-tools++/objects/pcsubstance/PC_MMDBSource.hpp +include/ncbi-tools++/objects/pcsubstance/PC_MMDBSource_.hpp +include/ncbi-tools++/objects/pcsubstance/PC_Source.hpp +include/ncbi-tools++/objects/pcsubstance/PC_Source_.hpp +include/ncbi-tools++/objects/pcsubstance/PC_StereoCenter.hpp +include/ncbi-tools++/objects/pcsubstance/PC_StereoCenter_.hpp +include/ncbi-tools++/objects/pcsubstance/PC_StereoGroup.hpp +include/ncbi-tools++/objects/pcsubstance/PC_StereoGroup_.hpp +include/ncbi-tools++/objects/pcsubstance/PC_StereoOctahedral.hpp +include/ncbi-tools++/objects/pcsubstance/PC_StereoOctahedral_.hpp +include/ncbi-tools++/objects/pcsubstance/PC_StereoPentagonalBiPyram.hpp +include/ncbi-tools++/objects/pcsubstance/PC_StereoPentagonalBiPyram_.hpp +include/ncbi-tools++/objects/pcsubstance/PC_StereoPlanar.hpp +include/ncbi-tools++/objects/pcsubstance/PC_StereoPlanar_.hpp +include/ncbi-tools++/objects/pcsubstance/PC_StereoSquarePlanar.hpp +include/ncbi-tools++/objects/pcsubstance/PC_StereoSquarePlanar_.hpp +include/ncbi-tools++/objects/pcsubstance/PC_StereoTShape.hpp +include/ncbi-tools++/objects/pcsubstance/PC_StereoTShape_.hpp +include/ncbi-tools++/objects/pcsubstance/PC_StereoTetrahedral.hpp +include/ncbi-tools++/objects/pcsubstance/PC_StereoTetrahedral_.hpp +include/ncbi-tools++/objects/pcsubstance/PC_StereoTrigonalBiPyramid.hpp +include/ncbi-tools++/objects/pcsubstance/PC_StereoTrigonalBiPyramid_.hpp +include/ncbi-tools++/objects/pcsubstance/PC_Substance.hpp +include/ncbi-tools++/objects/pcsubstance/PC_Substance_.hpp +include/ncbi-tools++/objects/pcsubstance/PC_Substances.hpp +include/ncbi-tools++/objects/pcsubstance/PC_Substances_.hpp +include/ncbi-tools++/objects/pcsubstance/PC_Urn.hpp +include/ncbi-tools++/objects/pcsubstance/PC_UrnDataType.hpp +include/ncbi-tools++/objects/pcsubstance/PC_UrnDataType_.hpp +include/ncbi-tools++/objects/pcsubstance/PC_Urn_.hpp +include/ncbi-tools++/objects/pcsubstance/PC_XRefData.hpp +include/ncbi-tools++/objects/pcsubstance/PC_XRefData_.hpp +include/ncbi-tools++/objects/pcsubstance/pcsubstance__.hpp +include/ncbi-tools++/objects/proj/.cvsignore +include/ncbi-tools++/objects/proj/.gitignore +include/ncbi-tools++/objects/proj/NCBI_Project_module.hpp +include/ncbi-tools++/objects/proj/Projdesc.hpp +include/ncbi-tools++/objects/proj/Projdesc_.hpp +include/ncbi-tools++/objects/proj/Project.hpp +include/ncbi-tools++/objects/proj/Project_.hpp +include/ncbi-tools++/objects/proj/Project_descr.hpp +include/ncbi-tools++/objects/proj/Project_descr_.hpp +include/ncbi-tools++/objects/proj/Project_id.hpp +include/ncbi-tools++/objects/proj/Project_id_.hpp +include/ncbi-tools++/objects/proj/Project_item.hpp +include/ncbi-tools++/objects/proj/Project_item_.hpp +include/ncbi-tools++/objects/proj/proj__.hpp +include/ncbi-tools++/objects/pub/.cvsignore +include/ncbi-tools++/objects/pub/.gitignore +include/ncbi-tools++/objects/pub/NCBI_Pub_module.hpp +include/ncbi-tools++/objects/pub/Pub.hpp +include/ncbi-tools++/objects/pub/Pub_.hpp +include/ncbi-tools++/objects/pub/Pub_equiv.hpp +include/ncbi-tools++/objects/pub/Pub_equiv_.hpp +include/ncbi-tools++/objects/pub/Pub_set.hpp +include/ncbi-tools++/objects/pub/Pub_set_.hpp +include/ncbi-tools++/objects/pub/pub__.hpp +include/ncbi-tools++/objects/pub/pub_macros.hpp +include/ncbi-tools++/objects/pubmed/.cvsignore +include/ncbi-tools++/objects/pubmed/.gitignore +include/ncbi-tools++/objects/pubmed/NCBI_PubMed_module.hpp +include/ncbi-tools++/objects/pubmed/Pubmed_entry.hpp +include/ncbi-tools++/objects/pubmed/Pubmed_entry_.hpp +include/ncbi-tools++/objects/pubmed/Pubmed_url.hpp +include/ncbi-tools++/objects/pubmed/Pubmed_url_.hpp +include/ncbi-tools++/objects/pubmed/pubmed__.hpp +include/ncbi-tools++/objects/remap/.cvsignore +include/ncbi-tools++/objects/remap/.gitignore +include/ncbi-tools++/objects/remap/NCBI_Remap_module.hpp +include/ncbi-tools++/objects/remap/RMReply.hpp +include/ncbi-tools++/objects/remap/RMReply_.hpp +include/ncbi-tools++/objects/remap/RMRequest.hpp +include/ncbi-tools++/objects/remap/RMRequest_.hpp +include/ncbi-tools++/objects/remap/Remap_db_id.hpp +include/ncbi-tools++/objects/remap/Remap_db_id_.hpp +include/ncbi-tools++/objects/remap/Remap_dt.hpp +include/ncbi-tools++/objects/remap/Remap_dt_.hpp +include/ncbi-tools++/objects/remap/Remap_query.hpp +include/ncbi-tools++/objects/remap/Remap_query_.hpp +include/ncbi-tools++/objects/remap/Remap_reply.hpp +include/ncbi-tools++/objects/remap/Remap_reply_.hpp +include/ncbi-tools++/objects/remap/Remap_request.hpp +include/ncbi-tools++/objects/remap/Remap_request_.hpp +include/ncbi-tools++/objects/remap/Remap_result.hpp +include/ncbi-tools++/objects/remap/Remap_result_.hpp +include/ncbi-tools++/objects/remap/remap__.hpp +include/ncbi-tools++/objects/remap/remap_client.hpp +include/ncbi-tools++/objects/remap/remap_client_.hpp +include/ncbi-tools++/objects/scoremat/.cvsignore +include/ncbi-tools++/objects/scoremat/.gitignore +include/ncbi-tools++/objects/scoremat/BlockProperty.hpp +include/ncbi-tools++/objects/scoremat/BlockProperty_.hpp +include/ncbi-tools++/objects/scoremat/CoreBlock.hpp +include/ncbi-tools++/objects/scoremat/CoreBlock_.hpp +include/ncbi-tools++/objects/scoremat/CoreDef.hpp +include/ncbi-tools++/objects/scoremat/CoreDef_.hpp +include/ncbi-tools++/objects/scoremat/FormatRpsDbParameters.hpp +include/ncbi-tools++/objects/scoremat/FormatRpsDbParameters_.hpp +include/ncbi-tools++/objects/scoremat/LoopConstraint.hpp +include/ncbi-tools++/objects/scoremat/LoopConstraint_.hpp +include/ncbi-tools++/objects/scoremat/NCBI_ScoreMat_module.hpp +include/ncbi-tools++/objects/scoremat/Pssm.hpp +include/ncbi-tools++/objects/scoremat/PssmFinalData.hpp +include/ncbi-tools++/objects/scoremat/PssmFinalData_.hpp +include/ncbi-tools++/objects/scoremat/PssmIntermediateData.hpp +include/ncbi-tools++/objects/scoremat/PssmIntermediateData_.hpp +include/ncbi-tools++/objects/scoremat/PssmParameters.hpp +include/ncbi-tools++/objects/scoremat/PssmParameters_.hpp +include/ncbi-tools++/objects/scoremat/PssmWithParameters.hpp +include/ncbi-tools++/objects/scoremat/PssmWithParameters_.hpp +include/ncbi-tools++/objects/scoremat/Pssm_.hpp +include/ncbi-tools++/objects/scoremat/Site_annot.hpp +include/ncbi-tools++/objects/scoremat/Site_annot_.hpp +include/ncbi-tools++/objects/scoremat/Site_annot_set.hpp +include/ncbi-tools++/objects/scoremat/Site_annot_set_.hpp +include/ncbi-tools++/objects/scoremat/scoremat__.hpp +include/ncbi-tools++/objects/seq/.cvsignore +include/ncbi-tools++/objects/seq/.gitignore +include/ncbi-tools++/objects/seq/Align_def.hpp +include/ncbi-tools++/objects/seq/Align_def_.hpp +include/ncbi-tools++/objects/seq/Annot_descr.hpp +include/ncbi-tools++/objects/seq/Annot_descr_.hpp +include/ncbi-tools++/objects/seq/Annot_id.hpp +include/ncbi-tools++/objects/seq/Annot_id_.hpp +include/ncbi-tools++/objects/seq/Annotdesc.hpp +include/ncbi-tools++/objects/seq/Annotdesc_.hpp +include/ncbi-tools++/objects/seq/Bioseq.hpp +include/ncbi-tools++/objects/seq/Bioseq_.hpp +include/ncbi-tools++/objects/seq/Delta_ext.hpp +include/ncbi-tools++/objects/seq/Delta_ext_.hpp +include/ncbi-tools++/objects/seq/Delta_seq.hpp +include/ncbi-tools++/objects/seq/Delta_seq_.hpp +include/ncbi-tools++/objects/seq/GIBB_method.hpp +include/ncbi-tools++/objects/seq/GIBB_method_.hpp +include/ncbi-tools++/objects/seq/GIBB_mod.hpp +include/ncbi-tools++/objects/seq/GIBB_mod_.hpp +include/ncbi-tools++/objects/seq/GIBB_mol.hpp +include/ncbi-tools++/objects/seq/GIBB_mol_.hpp +include/ncbi-tools++/objects/seq/Heterogen.hpp +include/ncbi-tools++/objects/seq/Heterogen_.hpp +include/ncbi-tools++/objects/seq/IUPACaa.hpp +include/ncbi-tools++/objects/seq/IUPACaa_.hpp +include/ncbi-tools++/objects/seq/IUPACna.hpp +include/ncbi-tools++/objects/seq/IUPACna_.hpp +include/ncbi-tools++/objects/seq/Linkage_evidence.hpp +include/ncbi-tools++/objects/seq/Linkage_evidence_.hpp +include/ncbi-tools++/objects/seq/Map_ext.hpp +include/ncbi-tools++/objects/seq/Map_ext_.hpp +include/ncbi-tools++/objects/seq/MolInfo.hpp +include/ncbi-tools++/objects/seq/MolInfo_.hpp +include/ncbi-tools++/objects/seq/NCBI2na.hpp +include/ncbi-tools++/objects/seq/NCBI2na_.hpp +include/ncbi-tools++/objects/seq/NCBI4na.hpp +include/ncbi-tools++/objects/seq/NCBI4na_.hpp +include/ncbi-tools++/objects/seq/NCBI8aa.hpp +include/ncbi-tools++/objects/seq/NCBI8aa_.hpp +include/ncbi-tools++/objects/seq/NCBI8na.hpp +include/ncbi-tools++/objects/seq/NCBI8na_.hpp +include/ncbi-tools++/objects/seq/NCBI_Sequence_module.hpp +include/ncbi-tools++/objects/seq/NCBIeaa.hpp +include/ncbi-tools++/objects/seq/NCBIeaa_.hpp +include/ncbi-tools++/objects/seq/NCBIpaa.hpp +include/ncbi-tools++/objects/seq/NCBIpaa_.hpp +include/ncbi-tools++/objects/seq/NCBIpna.hpp +include/ncbi-tools++/objects/seq/NCBIpna_.hpp +include/ncbi-tools++/objects/seq/NCBIstdaa.hpp +include/ncbi-tools++/objects/seq/NCBIstdaa_.hpp +include/ncbi-tools++/objects/seq/Num_cont.hpp +include/ncbi-tools++/objects/seq/Num_cont_.hpp +include/ncbi-tools++/objects/seq/Num_enum.hpp +include/ncbi-tools++/objects/seq/Num_enum_.hpp +include/ncbi-tools++/objects/seq/Num_real.hpp +include/ncbi-tools++/objects/seq/Num_real_.hpp +include/ncbi-tools++/objects/seq/Num_ref.hpp +include/ncbi-tools++/objects/seq/Num_ref_.hpp +include/ncbi-tools++/objects/seq/Numbering.hpp +include/ncbi-tools++/objects/seq/Numbering_.hpp +include/ncbi-tools++/objects/seq/Pubdesc.hpp +include/ncbi-tools++/objects/seq/Pubdesc_.hpp +include/ncbi-tools++/objects/seq/Ref_ext.hpp +include/ncbi-tools++/objects/seq/Ref_ext_.hpp +include/ncbi-tools++/objects/seq/Seg_ext.hpp +include/ncbi-tools++/objects/seq/Seg_ext_.hpp +include/ncbi-tools++/objects/seq/Seq_annot.hpp +include/ncbi-tools++/objects/seq/Seq_annot_.hpp +include/ncbi-tools++/objects/seq/Seq_data.hpp +include/ncbi-tools++/objects/seq/Seq_data_.hpp +include/ncbi-tools++/objects/seq/Seq_descr.hpp +include/ncbi-tools++/objects/seq/Seq_descr_.hpp +include/ncbi-tools++/objects/seq/Seq_ext.hpp +include/ncbi-tools++/objects/seq/Seq_ext_.hpp +include/ncbi-tools++/objects/seq/Seq_gap.hpp +include/ncbi-tools++/objects/seq/Seq_gap_.hpp +include/ncbi-tools++/objects/seq/Seq_hist.hpp +include/ncbi-tools++/objects/seq/Seq_hist_.hpp +include/ncbi-tools++/objects/seq/Seq_hist_rec.hpp +include/ncbi-tools++/objects/seq/Seq_hist_rec_.hpp +include/ncbi-tools++/objects/seq/Seq_inst.hpp +include/ncbi-tools++/objects/seq/Seq_inst_.hpp +include/ncbi-tools++/objects/seq/Seq_literal.hpp +include/ncbi-tools++/objects/seq/Seq_literal_.hpp +include/ncbi-tools++/objects/seq/Seqdesc.hpp +include/ncbi-tools++/objects/seq/Seqdesc_.hpp +include/ncbi-tools++/objects/seq/Textannot_id.hpp +include/ncbi-tools++/objects/seq/Textannot_id_.hpp +include/ncbi-tools++/objects/seq/annot_mapper_exception.hpp +include/ncbi-tools++/objects/seq/seq__.hpp +include/ncbi-tools++/objects/seq/seq_align_mapper_base.hpp +include/ncbi-tools++/objects/seq/seq_id_handle.hpp +include/ncbi-tools++/objects/seq/seq_id_mapper.hpp +include/ncbi-tools++/objects/seq/seq_loc_from_string.hpp +include/ncbi-tools++/objects/seq/seq_loc_mapper_base.hpp +include/ncbi-tools++/objects/seq/seq_loc_reverse_complementer.hpp +include/ncbi-tools++/objects/seq/seq_macros.hpp +include/ncbi-tools++/objects/seq/seqlocinfo.hpp +include/ncbi-tools++/objects/seq/seqport_util.hpp +include/ncbi-tools++/objects/seq/so_map.hpp +include/ncbi-tools++/objects/seq/sofa_map.hpp +include/ncbi-tools++/objects/seq/sofa_type.hpp +include/ncbi-tools++/objects/seqalign/.cvsignore +include/ncbi-tools++/objects/seqalign/.gitignore +include/ncbi-tools++/objects/seqalign/Dense_diag.hpp +include/ncbi-tools++/objects/seqalign/Dense_diag_.hpp +include/ncbi-tools++/objects/seqalign/Dense_seg.hpp +include/ncbi-tools++/objects/seqalign/Dense_seg_.hpp +include/ncbi-tools++/objects/seqalign/NCBI_Seqalign_module.hpp +include/ncbi-tools++/objects/seqalign/Packed_seg.hpp +include/ncbi-tools++/objects/seqalign/Packed_seg_.hpp +include/ncbi-tools++/objects/seqalign/Product_pos.hpp +include/ncbi-tools++/objects/seqalign/Product_pos_.hpp +include/ncbi-tools++/objects/seqalign/Prot_pos.hpp +include/ncbi-tools++/objects/seqalign/Prot_pos_.hpp +include/ncbi-tools++/objects/seqalign/Score.hpp +include/ncbi-tools++/objects/seqalign/Score_.hpp +include/ncbi-tools++/objects/seqalign/Score_set.hpp +include/ncbi-tools++/objects/seqalign/Score_set_.hpp +include/ncbi-tools++/objects/seqalign/Seq_align.hpp +include/ncbi-tools++/objects/seqalign/Seq_align_.hpp +include/ncbi-tools++/objects/seqalign/Seq_align_set.hpp +include/ncbi-tools++/objects/seqalign/Seq_align_set_.hpp +include/ncbi-tools++/objects/seqalign/Sparse_align.hpp +include/ncbi-tools++/objects/seqalign/Sparse_align_.hpp +include/ncbi-tools++/objects/seqalign/Sparse_seg.hpp +include/ncbi-tools++/objects/seqalign/Sparse_seg_.hpp +include/ncbi-tools++/objects/seqalign/Sparse_seg_ext.hpp +include/ncbi-tools++/objects/seqalign/Sparse_seg_ext_.hpp +include/ncbi-tools++/objects/seqalign/Splice_site.hpp +include/ncbi-tools++/objects/seqalign/Splice_site_.hpp +include/ncbi-tools++/objects/seqalign/Spliced_exon.hpp +include/ncbi-tools++/objects/seqalign/Spliced_exon_.hpp +include/ncbi-tools++/objects/seqalign/Spliced_exon_chunk.hpp +include/ncbi-tools++/objects/seqalign/Spliced_exon_chunk_.hpp +include/ncbi-tools++/objects/seqalign/Spliced_seg.hpp +include/ncbi-tools++/objects/seqalign/Spliced_seg_.hpp +include/ncbi-tools++/objects/seqalign/Spliced_seg_modifier.hpp +include/ncbi-tools++/objects/seqalign/Spliced_seg_modifier_.hpp +include/ncbi-tools++/objects/seqalign/Std_seg.hpp +include/ncbi-tools++/objects/seqalign/Std_seg_.hpp +include/ncbi-tools++/objects/seqalign/seqalign__.hpp +include/ncbi-tools++/objects/seqalign/seqalign_exception.hpp +include/ncbi-tools++/objects/seqalign/seqalign_macros.hpp +include/ncbi-tools++/objects/seqblock/.cvsignore +include/ncbi-tools++/objects/seqblock/.gitignore +include/ncbi-tools++/objects/seqblock/EMBL_General_module.hpp +include/ncbi-tools++/objects/seqblock/EMBL_block.hpp +include/ncbi-tools++/objects/seqblock/EMBL_block_.hpp +include/ncbi-tools++/objects/seqblock/EMBL_dbname.hpp +include/ncbi-tools++/objects/seqblock/EMBL_dbname_.hpp +include/ncbi-tools++/objects/seqblock/EMBL_xref.hpp +include/ncbi-tools++/objects/seqblock/EMBL_xref_.hpp +include/ncbi-tools++/objects/seqblock/GB_block.hpp +include/ncbi-tools++/objects/seqblock/GB_block_.hpp +include/ncbi-tools++/objects/seqblock/GenBank_General_module.hpp +include/ncbi-tools++/objects/seqblock/PDB_General_module.hpp +include/ncbi-tools++/objects/seqblock/PDB_block.hpp +include/ncbi-tools++/objects/seqblock/PDB_block_.hpp +include/ncbi-tools++/objects/seqblock/PDB_replace.hpp +include/ncbi-tools++/objects/seqblock/PDB_replace_.hpp +include/ncbi-tools++/objects/seqblock/PIR_General_module.hpp +include/ncbi-tools++/objects/seqblock/PIR_block.hpp +include/ncbi-tools++/objects/seqblock/PIR_block_.hpp +include/ncbi-tools++/objects/seqblock/PRF_ExtraSrc.hpp +include/ncbi-tools++/objects/seqblock/PRF_ExtraSrc_.hpp +include/ncbi-tools++/objects/seqblock/PRF_General_module.hpp +include/ncbi-tools++/objects/seqblock/PRF_block.hpp +include/ncbi-tools++/objects/seqblock/PRF_block_.hpp +include/ncbi-tools++/objects/seqblock/SP_General_module.hpp +include/ncbi-tools++/objects/seqblock/SP_block.hpp +include/ncbi-tools++/objects/seqblock/SP_block_.hpp +include/ncbi-tools++/objects/seqblock/seqblock__.hpp +include/ncbi-tools++/objects/seqblock/seqblock_macros.hpp +include/ncbi-tools++/objects/seqcode/.cvsignore +include/ncbi-tools++/objects/seqcode/.gitignore +include/ncbi-tools++/objects/seqcode/NCBI_SeqCode_module.hpp +include/ncbi-tools++/objects/seqcode/Seq_code_set.hpp +include/ncbi-tools++/objects/seqcode/Seq_code_set_.hpp +include/ncbi-tools++/objects/seqcode/Seq_code_table.hpp +include/ncbi-tools++/objects/seqcode/Seq_code_table_.hpp +include/ncbi-tools++/objects/seqcode/Seq_code_type.hpp +include/ncbi-tools++/objects/seqcode/Seq_code_type_.hpp +include/ncbi-tools++/objects/seqcode/Seq_map_table.hpp +include/ncbi-tools++/objects/seqcode/Seq_map_table_.hpp +include/ncbi-tools++/objects/seqcode/seqcode__.hpp +include/ncbi-tools++/objects/seqedit/.cvsignore +include/ncbi-tools++/objects/seqedit/.gitignore +include/ncbi-tools++/objects/seqedit/NCBI_SeqEdit_module.hpp +include/ncbi-tools++/objects/seqedit/SeqEdit_Cmd.hpp +include/ncbi-tools++/objects/seqedit/SeqEdit_Cmd_.hpp +include/ncbi-tools++/objects/seqedit/SeqEdit_Cmd_AddAnnot.hpp +include/ncbi-tools++/objects/seqedit/SeqEdit_Cmd_AddAnnot_.hpp +include/ncbi-tools++/objects/seqedit/SeqEdit_Cmd_AddDesc.hpp +include/ncbi-tools++/objects/seqedit/SeqEdit_Cmd_AddDesc_.hpp +include/ncbi-tools++/objects/seqedit/SeqEdit_Cmd_AddDescr.hpp +include/ncbi-tools++/objects/seqedit/SeqEdit_Cmd_AddDescr_.hpp +include/ncbi-tools++/objects/seqedit/SeqEdit_Cmd_AddId.hpp +include/ncbi-tools++/objects/seqedit/SeqEdit_Cmd_AddId_.hpp +include/ncbi-tools++/objects/seqedit/SeqEdit_Cmd_AttachAnnot.hpp +include/ncbi-tools++/objects/seqedit/SeqEdit_Cmd_AttachAnnot_.hpp +include/ncbi-tools++/objects/seqedit/SeqEdit_Cmd_AttachSeq.hpp +include/ncbi-tools++/objects/seqedit/SeqEdit_Cmd_AttachSeqEntry.hpp +include/ncbi-tools++/objects/seqedit/SeqEdit_Cmd_AttachSeqEntry_.hpp +include/ncbi-tools++/objects/seqedit/SeqEdit_Cmd_AttachSeq_.hpp +include/ncbi-tools++/objects/seqedit/SeqEdit_Cmd_AttachSet.hpp +include/ncbi-tools++/objects/seqedit/SeqEdit_Cmd_AttachSet_.hpp +include/ncbi-tools++/objects/seqedit/SeqEdit_Cmd_ChangeSeqAttr.hpp +include/ncbi-tools++/objects/seqedit/SeqEdit_Cmd_ChangeSeqAttr_.hpp +include/ncbi-tools++/objects/seqedit/SeqEdit_Cmd_ChangeSetAttr.hpp +include/ncbi-tools++/objects/seqedit/SeqEdit_Cmd_ChangeSetAttr_.hpp +include/ncbi-tools++/objects/seqedit/SeqEdit_Cmd_RemoveAnnot.hpp +include/ncbi-tools++/objects/seqedit/SeqEdit_Cmd_RemoveAnnot_.hpp +include/ncbi-tools++/objects/seqedit/SeqEdit_Cmd_RemoveDesc.hpp +include/ncbi-tools++/objects/seqedit/SeqEdit_Cmd_RemoveDesc_.hpp +include/ncbi-tools++/objects/seqedit/SeqEdit_Cmd_RemoveId.hpp +include/ncbi-tools++/objects/seqedit/SeqEdit_Cmd_RemoveId_.hpp +include/ncbi-tools++/objects/seqedit/SeqEdit_Cmd_RemoveSeqEntry.hpp +include/ncbi-tools++/objects/seqedit/SeqEdit_Cmd_RemoveSeqEntry_.hpp +include/ncbi-tools++/objects/seqedit/SeqEdit_Cmd_ReplaceAnnot.hpp +include/ncbi-tools++/objects/seqedit/SeqEdit_Cmd_ReplaceAnnot_.hpp +include/ncbi-tools++/objects/seqedit/SeqEdit_Cmd_ResetDescr.hpp +include/ncbi-tools++/objects/seqedit/SeqEdit_Cmd_ResetDescr_.hpp +include/ncbi-tools++/objects/seqedit/SeqEdit_Cmd_ResetIds.hpp +include/ncbi-tools++/objects/seqedit/SeqEdit_Cmd_ResetIds_.hpp +include/ncbi-tools++/objects/seqedit/SeqEdit_Cmd_ResetSeqAttr.hpp +include/ncbi-tools++/objects/seqedit/SeqEdit_Cmd_ResetSeqAttr_.hpp +include/ncbi-tools++/objects/seqedit/SeqEdit_Cmd_ResetSeqEntry.hpp +include/ncbi-tools++/objects/seqedit/SeqEdit_Cmd_ResetSeqEntry_.hpp +include/ncbi-tools++/objects/seqedit/SeqEdit_Cmd_ResetSetAttr.hpp +include/ncbi-tools++/objects/seqedit/SeqEdit_Cmd_ResetSetAttr_.hpp +include/ncbi-tools++/objects/seqedit/SeqEdit_Cmd_SetDescr.hpp +include/ncbi-tools++/objects/seqedit/SeqEdit_Cmd_SetDescr_.hpp +include/ncbi-tools++/objects/seqedit/SeqEdit_Id.hpp +include/ncbi-tools++/objects/seqedit/SeqEdit_Id_.hpp +include/ncbi-tools++/objects/seqedit/seqedit__.hpp +include/ncbi-tools++/objects/seqfeat/.cvsignore +include/ncbi-tools++/objects/seqfeat/.gitignore +include/ncbi-tools++/objects/seqfeat/BinomialOrgName.hpp +include/ncbi-tools++/objects/seqfeat/BinomialOrgName_.hpp +include/ncbi-tools++/objects/seqfeat/BioSource.hpp +include/ncbi-tools++/objects/seqfeat/BioSource_.hpp +include/ncbi-tools++/objects/seqfeat/Cdregion.hpp +include/ncbi-tools++/objects/seqfeat/Cdregion_.hpp +include/ncbi-tools++/objects/seqfeat/Clone_ref.hpp +include/ncbi-tools++/objects/seqfeat/Clone_ref_.hpp +include/ncbi-tools++/objects/seqfeat/Clone_seq.hpp +include/ncbi-tools++/objects/seqfeat/Clone_seq_.hpp +include/ncbi-tools++/objects/seqfeat/Clone_seq_set.hpp +include/ncbi-tools++/objects/seqfeat/Clone_seq_set_.hpp +include/ncbi-tools++/objects/seqfeat/Code_break.hpp +include/ncbi-tools++/objects/seqfeat/Code_break_.hpp +include/ncbi-tools++/objects/seqfeat/Delta_item.hpp +include/ncbi-tools++/objects/seqfeat/Delta_item_.hpp +include/ncbi-tools++/objects/seqfeat/EvidenceBasis.hpp +include/ncbi-tools++/objects/seqfeat/EvidenceBasis_.hpp +include/ncbi-tools++/objects/seqfeat/EvidenceCategory.hpp +include/ncbi-tools++/objects/seqfeat/EvidenceCategory_.hpp +include/ncbi-tools++/objects/seqfeat/ExperimentSupport.hpp +include/ncbi-tools++/objects/seqfeat/ExperimentSupport_.hpp +include/ncbi-tools++/objects/seqfeat/Ext_loc.hpp +include/ncbi-tools++/objects/seqfeat/Ext_loc_.hpp +include/ncbi-tools++/objects/seqfeat/Feat_id.hpp +include/ncbi-tools++/objects/seqfeat/Feat_id_.hpp +include/ncbi-tools++/objects/seqfeat/Gb_qual.hpp +include/ncbi-tools++/objects/seqfeat/Gb_qual_.hpp +include/ncbi-tools++/objects/seqfeat/Gene_nomenclature.hpp +include/ncbi-tools++/objects/seqfeat/Gene_nomenclature_.hpp +include/ncbi-tools++/objects/seqfeat/Gene_ref.hpp +include/ncbi-tools++/objects/seqfeat/Gene_ref_.hpp +include/ncbi-tools++/objects/seqfeat/Genetic_code.hpp +include/ncbi-tools++/objects/seqfeat/Genetic_code_.hpp +include/ncbi-tools++/objects/seqfeat/Genetic_code_table.hpp +include/ncbi-tools++/objects/seqfeat/Genetic_code_table_.hpp +include/ncbi-tools++/objects/seqfeat/ISeq_feat.hpp +include/ncbi-tools++/objects/seqfeat/Imp_feat.hpp +include/ncbi-tools++/objects/seqfeat/Imp_feat_.hpp +include/ncbi-tools++/objects/seqfeat/InferenceSupport.hpp +include/ncbi-tools++/objects/seqfeat/InferenceSupport_.hpp +include/ncbi-tools++/objects/seqfeat/ModelEvidenceItem.hpp +include/ncbi-tools++/objects/seqfeat/ModelEvidenceItem_.hpp +include/ncbi-tools++/objects/seqfeat/ModelEvidenceSupport.hpp +include/ncbi-tools++/objects/seqfeat/ModelEvidenceSupport_.hpp +include/ncbi-tools++/objects/seqfeat/MultiOrgName.hpp +include/ncbi-tools++/objects/seqfeat/MultiOrgName_.hpp +include/ncbi-tools++/objects/seqfeat/NCBI_BioSource_module.hpp +include/ncbi-tools++/objects/seqfeat/NCBI_Gene_module.hpp +include/ncbi-tools++/objects/seqfeat/NCBI_Organism_module.hpp +include/ncbi-tools++/objects/seqfeat/NCBI_Protein_module.hpp +include/ncbi-tools++/objects/seqfeat/NCBI_RNA_module.hpp +include/ncbi-tools++/objects/seqfeat/NCBI_Rsite_module.hpp +include/ncbi-tools++/objects/seqfeat/NCBI_Seqfeat_module.hpp +include/ncbi-tools++/objects/seqfeat/NCBI_TxInit_module.hpp +include/ncbi-tools++/objects/seqfeat/NCBI_Variation_module.hpp +include/ncbi-tools++/objects/seqfeat/OrgMod.hpp +include/ncbi-tools++/objects/seqfeat/OrgMod_.hpp +include/ncbi-tools++/objects/seqfeat/OrgName.hpp +include/ncbi-tools++/objects/seqfeat/OrgName_.hpp +include/ncbi-tools++/objects/seqfeat/Org_ref.hpp +include/ncbi-tools++/objects/seqfeat/Org_ref_.hpp +include/ncbi-tools++/objects/seqfeat/PCRPrimer.hpp +include/ncbi-tools++/objects/seqfeat/PCRPrimerName.hpp +include/ncbi-tools++/objects/seqfeat/PCRPrimerName_.hpp +include/ncbi-tools++/objects/seqfeat/PCRPrimerSeq.hpp +include/ncbi-tools++/objects/seqfeat/PCRPrimerSeq_.hpp +include/ncbi-tools++/objects/seqfeat/PCRPrimerSet.hpp +include/ncbi-tools++/objects/seqfeat/PCRPrimerSet_.hpp +include/ncbi-tools++/objects/seqfeat/PCRPrimer_.hpp +include/ncbi-tools++/objects/seqfeat/PCRReaction.hpp +include/ncbi-tools++/objects/seqfeat/PCRReactionSet.hpp +include/ncbi-tools++/objects/seqfeat/PCRReactionSet_.hpp +include/ncbi-tools++/objects/seqfeat/PCRReaction_.hpp +include/ncbi-tools++/objects/seqfeat/PartialOrgName.hpp +include/ncbi-tools++/objects/seqfeat/PartialOrgName_.hpp +include/ncbi-tools++/objects/seqfeat/Phenotype.hpp +include/ncbi-tools++/objects/seqfeat/Phenotype_.hpp +include/ncbi-tools++/objects/seqfeat/Population_data.hpp +include/ncbi-tools++/objects/seqfeat/Population_data_.hpp +include/ncbi-tools++/objects/seqfeat/Program_id.hpp +include/ncbi-tools++/objects/seqfeat/Program_id_.hpp +include/ncbi-tools++/objects/seqfeat/Prot_ref.hpp +include/ncbi-tools++/objects/seqfeat/Prot_ref_.hpp +include/ncbi-tools++/objects/seqfeat/RNA_gen.hpp +include/ncbi-tools++/objects/seqfeat/RNA_gen_.hpp +include/ncbi-tools++/objects/seqfeat/RNA_qual.hpp +include/ncbi-tools++/objects/seqfeat/RNA_qual_.hpp +include/ncbi-tools++/objects/seqfeat/RNA_qual_set.hpp +include/ncbi-tools++/objects/seqfeat/RNA_qual_set_.hpp +include/ncbi-tools++/objects/seqfeat/RNA_ref.hpp +include/ncbi-tools++/objects/seqfeat/RNA_ref_.hpp +include/ncbi-tools++/objects/seqfeat/Rsite_ref.hpp +include/ncbi-tools++/objects/seqfeat/Rsite_ref_.hpp +include/ncbi-tools++/objects/seqfeat/SeqFeatData.hpp +include/ncbi-tools++/objects/seqfeat/SeqFeatData_.hpp +include/ncbi-tools++/objects/seqfeat/SeqFeatSupport.hpp +include/ncbi-tools++/objects/seqfeat/SeqFeatSupport_.hpp +include/ncbi-tools++/objects/seqfeat/SeqFeatXref.hpp +include/ncbi-tools++/objects/seqfeat/SeqFeatXref_.hpp +include/ncbi-tools++/objects/seqfeat/Seq_feat.hpp +include/ncbi-tools++/objects/seqfeat/Seq_feat_.hpp +include/ncbi-tools++/objects/seqfeat/SubSource.hpp +include/ncbi-tools++/objects/seqfeat/SubSource_.hpp +include/ncbi-tools++/objects/seqfeat/TaxElement.hpp +include/ncbi-tools++/objects/seqfeat/TaxElement_.hpp +include/ncbi-tools++/objects/seqfeat/Trna_ext.hpp +include/ncbi-tools++/objects/seqfeat/Trna_ext_.hpp +include/ncbi-tools++/objects/seqfeat/Tx_evidence.hpp +include/ncbi-tools++/objects/seqfeat/Tx_evidence_.hpp +include/ncbi-tools++/objects/seqfeat/Txinit.hpp +include/ncbi-tools++/objects/seqfeat/Txinit_.hpp +include/ncbi-tools++/objects/seqfeat/VariantProperties.hpp +include/ncbi-tools++/objects/seqfeat/VariantProperties_.hpp +include/ncbi-tools++/objects/seqfeat/Variation_inst.hpp +include/ncbi-tools++/objects/seqfeat/Variation_inst_.hpp +include/ncbi-tools++/objects/seqfeat/Variation_ref.hpp +include/ncbi-tools++/objects/seqfeat/Variation_ref_.hpp +include/ncbi-tools++/objects/seqfeat/seqfeat__.hpp +include/ncbi-tools++/objects/seqfeat/seqfeat_macros.hpp +include/ncbi-tools++/objects/seqloc/.cvsignore +include/ncbi-tools++/objects/seqloc/.gitignore +include/ncbi-tools++/objects/seqloc/Giimport_id.hpp +include/ncbi-tools++/objects/seqloc/Giimport_id_.hpp +include/ncbi-tools++/objects/seqloc/NCBI_Seqloc_module.hpp +include/ncbi-tools++/objects/seqloc/Na_strand.hpp +include/ncbi-tools++/objects/seqloc/Na_strand_.hpp +include/ncbi-tools++/objects/seqloc/PDB_mol_id.hpp +include/ncbi-tools++/objects/seqloc/PDB_mol_id_.hpp +include/ncbi-tools++/objects/seqloc/PDB_seq_id.hpp +include/ncbi-tools++/objects/seqloc/PDB_seq_id_.hpp +include/ncbi-tools++/objects/seqloc/Packed_seqint.hpp +include/ncbi-tools++/objects/seqloc/Packed_seqint_.hpp +include/ncbi-tools++/objects/seqloc/Packed_seqpnt.hpp +include/ncbi-tools++/objects/seqloc/Packed_seqpnt_.hpp +include/ncbi-tools++/objects/seqloc/Patent_seq_id.hpp +include/ncbi-tools++/objects/seqloc/Patent_seq_id_.hpp +include/ncbi-tools++/objects/seqloc/Seq_bond.hpp +include/ncbi-tools++/objects/seqloc/Seq_bond_.hpp +include/ncbi-tools++/objects/seqloc/Seq_id.hpp +include/ncbi-tools++/objects/seqloc/Seq_id_.hpp +include/ncbi-tools++/objects/seqloc/Seq_id_set.hpp +include/ncbi-tools++/objects/seqloc/Seq_id_set_.hpp +include/ncbi-tools++/objects/seqloc/Seq_interval.hpp +include/ncbi-tools++/objects/seqloc/Seq_interval_.hpp +include/ncbi-tools++/objects/seqloc/Seq_loc.hpp +include/ncbi-tools++/objects/seqloc/Seq_loc_.hpp +include/ncbi-tools++/objects/seqloc/Seq_loc_equiv.hpp +include/ncbi-tools++/objects/seqloc/Seq_loc_equiv_.hpp +include/ncbi-tools++/objects/seqloc/Seq_loc_mix.hpp +include/ncbi-tools++/objects/seqloc/Seq_loc_mix_.hpp +include/ncbi-tools++/objects/seqloc/Seq_point.hpp +include/ncbi-tools++/objects/seqloc/Seq_point_.hpp +include/ncbi-tools++/objects/seqloc/Textseq_id.hpp +include/ncbi-tools++/objects/seqloc/Textseq_id_.hpp +include/ncbi-tools++/objects/seqloc/seqloc__.hpp +include/ncbi-tools++/objects/seqloc/seqloc_macros.hpp +include/ncbi-tools++/objects/seqres/.cvsignore +include/ncbi-tools++/objects/seqres/.gitignore +include/ncbi-tools++/objects/seqres/Byte_graph.hpp +include/ncbi-tools++/objects/seqres/Byte_graph_.hpp +include/ncbi-tools++/objects/seqres/Int_graph.hpp +include/ncbi-tools++/objects/seqres/Int_graph_.hpp +include/ncbi-tools++/objects/seqres/NCBI_Seqres_module.hpp +include/ncbi-tools++/objects/seqres/Real_graph.hpp +include/ncbi-tools++/objects/seqres/Real_graph_.hpp +include/ncbi-tools++/objects/seqres/Seq_graph.hpp +include/ncbi-tools++/objects/seqres/Seq_graph_.hpp +include/ncbi-tools++/objects/seqres/seqres__.hpp +include/ncbi-tools++/objects/seqset/.cvsignore +include/ncbi-tools++/objects/seqset/.gitignore +include/ncbi-tools++/objects/seqset/Bioseq_set.hpp +include/ncbi-tools++/objects/seqset/Bioseq_set_.hpp +include/ncbi-tools++/objects/seqset/NCBI_Seqset_module.hpp +include/ncbi-tools++/objects/seqset/Seq_entry.hpp +include/ncbi-tools++/objects/seqset/Seq_entry_.hpp +include/ncbi-tools++/objects/seqset/gb_release_file.hpp +include/ncbi-tools++/objects/seqset/seqset__.hpp +include/ncbi-tools++/objects/seqset/seqset_exception.hpp +include/ncbi-tools++/objects/seqset/seqset_macros.hpp +include/ncbi-tools++/objects/seqsplit/.cvsignore +include/ncbi-tools++/objects/seqsplit/.gitignore +include/ncbi-tools++/objects/seqsplit/ID2S_Bioseq_Ids.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Bioseq_Ids_.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Bioseq_Info.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Bioseq_Info_.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Bioseq_place_Info.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Bioseq_place_Info_.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Bioseq_set_Ids.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Bioseq_set_Ids_.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Bioseqs_Info.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Bioseqs_Info_.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Chunk.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Chunk_.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Chunk_Content.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Chunk_Content_.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Chunk_Data.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Chunk_Data_.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Chunk_Id.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Chunk_Id_.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Chunk_Info.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Chunk_Info_.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Feat_type_Info.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Feat_type_Info_.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Gi_Interval.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Gi_Interval_.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Gi_Ints.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Gi_Ints_.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Gi_Range.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Gi_Range_.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Interval.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Interval_.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Seq_annot_Info.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Seq_annot_Info_.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Seq_annot_place_Info.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Seq_annot_place_Info_.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Seq_assembly_Info.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Seq_assembly_Info_.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Seq_data_Info.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Seq_data_Info_.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Seq_descr_Info.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Seq_descr_Info_.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Seq_feat_Ids_Info.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Seq_feat_Ids_Info_.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Seq_id_Interval.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Seq_id_Interval_.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Seq_id_Ints.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Seq_id_Ints_.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Seq_loc.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Seq_loc_.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Seq_map_Info.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Seq_map_Info_.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Sequence_Piece.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Sequence_Piece_.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Split_Info.hpp +include/ncbi-tools++/objects/seqsplit/ID2S_Split_Info_.hpp +include/ncbi-tools++/objects/seqsplit/NCBI_Seq_split_module.hpp +include/ncbi-tools++/objects/seqsplit/seqsplit__.hpp +include/ncbi-tools++/objects/seqtable/.cvsignore +include/ncbi-tools++/objects/seqtable/.gitignore +include/ncbi-tools++/objects/seqtable/BVector_data.hpp +include/ncbi-tools++/objects/seqtable/BVector_data_.hpp +include/ncbi-tools++/objects/seqtable/CommonBytes_table.hpp +include/ncbi-tools++/objects/seqtable/CommonBytes_table_.hpp +include/ncbi-tools++/objects/seqtable/CommonString_table.hpp +include/ncbi-tools++/objects/seqtable/CommonString_table_.hpp +include/ncbi-tools++/objects/seqtable/NCBI_SeqTable_module.hpp +include/ncbi-tools++/objects/seqtable/Scaled_int_multi_data.hpp +include/ncbi-tools++/objects/seqtable/Scaled_int_multi_data_.hpp +include/ncbi-tools++/objects/seqtable/Scaled_real_multi_data.hpp +include/ncbi-tools++/objects/seqtable/Scaled_real_multi_data_.hpp +include/ncbi-tools++/objects/seqtable/SeqTable_column.hpp +include/ncbi-tools++/objects/seqtable/SeqTable_column_.hpp +include/ncbi-tools++/objects/seqtable/SeqTable_column_info.hpp +include/ncbi-tools++/objects/seqtable/SeqTable_column_info_.hpp +include/ncbi-tools++/objects/seqtable/SeqTable_multi_data.hpp +include/ncbi-tools++/objects/seqtable/SeqTable_multi_data_.hpp +include/ncbi-tools++/objects/seqtable/SeqTable_single_data.hpp +include/ncbi-tools++/objects/seqtable/SeqTable_single_data_.hpp +include/ncbi-tools++/objects/seqtable/SeqTable_sparse_index.hpp +include/ncbi-tools++/objects/seqtable/SeqTable_sparse_index_.hpp +include/ncbi-tools++/objects/seqtable/Seq_table.hpp +include/ncbi-tools++/objects/seqtable/Seq_table_.hpp +include/ncbi-tools++/objects/seqtable/impl/delta_cache.hpp +include/ncbi-tools++/objects/seqtable/seq_table_exception.hpp +include/ncbi-tools++/objects/seqtable/seqtable__.hpp +include/ncbi-tools++/objects/seqtest/.cvsignore +include/ncbi-tools++/objects/seqtest/.gitignore +include/ncbi-tools++/objects/seqtest/NCBI_SeqTest_module.hpp +include/ncbi-tools++/objects/seqtest/SeqTestResults.hpp +include/ncbi-tools++/objects/seqtest/SeqTestResults_.hpp +include/ncbi-tools++/objects/seqtest/Seq_test_result.hpp +include/ncbi-tools++/objects/seqtest/Seq_test_result_.hpp +include/ncbi-tools++/objects/seqtest/Seq_test_result_set.hpp +include/ncbi-tools++/objects/seqtest/Seq_test_result_set_.hpp +include/ncbi-tools++/objects/seqtest/seqtest__.hpp +include/ncbi-tools++/objects/submit/.cvsignore +include/ncbi-tools++/objects/submit/.gitignore +include/ncbi-tools++/objects/submit/Contact_info.hpp +include/ncbi-tools++/objects/submit/Contact_info_.hpp +include/ncbi-tools++/objects/submit/NCBI_Submit_module.hpp +include/ncbi-tools++/objects/submit/Seq_submit.hpp +include/ncbi-tools++/objects/submit/Seq_submit_.hpp +include/ncbi-tools++/objects/submit/Submit_block.hpp +include/ncbi-tools++/objects/submit/Submit_block_.hpp +include/ncbi-tools++/objects/submit/submit__.hpp +include/ncbi-tools++/objects/submit/submit_macros.hpp +include/ncbi-tools++/objects/taxon1/.cvsignore +include/ncbi-tools++/objects/taxon1/.gitignore +include/ncbi-tools++/objects/taxon1/NCBI_Taxon1_module.hpp +include/ncbi-tools++/objects/taxon1/Taxon1_data.hpp +include/ncbi-tools++/objects/taxon1/Taxon1_data_.hpp +include/ncbi-tools++/objects/taxon1/Taxon1_error.hpp +include/ncbi-tools++/objects/taxon1/Taxon1_error_.hpp +include/ncbi-tools++/objects/taxon1/Taxon1_info.hpp +include/ncbi-tools++/objects/taxon1/Taxon1_info_.hpp +include/ncbi-tools++/objects/taxon1/Taxon1_name.hpp +include/ncbi-tools++/objects/taxon1/Taxon1_name_.hpp +include/ncbi-tools++/objects/taxon1/Taxon1_req.hpp +include/ncbi-tools++/objects/taxon1/Taxon1_req_.hpp +include/ncbi-tools++/objects/taxon1/Taxon1_resp.hpp +include/ncbi-tools++/objects/taxon1/Taxon1_resp_.hpp +include/ncbi-tools++/objects/taxon1/Taxon2_data.hpp +include/ncbi-tools++/objects/taxon1/Taxon2_data_.hpp +include/ncbi-tools++/objects/taxon1/taxon1.hpp +include/ncbi-tools++/objects/taxon1/taxon1__.hpp +include/ncbi-tools++/objects/taxon3/.cvsignore +include/ncbi-tools++/objects/taxon3/.gitignore +include/ncbi-tools++/objects/taxon3/NCBI_Taxon3_module.hpp +include/ncbi-tools++/objects/taxon3/SequenceOfInt.hpp +include/ncbi-tools++/objects/taxon3/SequenceOfInt_.hpp +include/ncbi-tools++/objects/taxon3/T3Data.hpp +include/ncbi-tools++/objects/taxon3/T3Data_.hpp +include/ncbi-tools++/objects/taxon3/T3Error.hpp +include/ncbi-tools++/objects/taxon3/T3Error_.hpp +include/ncbi-tools++/objects/taxon3/T3RefreshFlags.hpp +include/ncbi-tools++/objects/taxon3/T3RefreshFlags_.hpp +include/ncbi-tools++/objects/taxon3/T3Reply.hpp +include/ncbi-tools++/objects/taxon3/T3Reply_.hpp +include/ncbi-tools++/objects/taxon3/T3Request.hpp +include/ncbi-tools++/objects/taxon3/T3Request_.hpp +include/ncbi-tools++/objects/taxon3/T3StatusFlags.hpp +include/ncbi-tools++/objects/taxon3/T3StatusFlags_.hpp +include/ncbi-tools++/objects/taxon3/Taxon3_reply.hpp +include/ncbi-tools++/objects/taxon3/Taxon3_reply_.hpp +include/ncbi-tools++/objects/taxon3/Taxon3_request.hpp +include/ncbi-tools++/objects/taxon3/Taxon3_request_.hpp +include/ncbi-tools++/objects/taxon3/cached_taxon3.hpp +include/ncbi-tools++/objects/taxon3/itaxon3.hpp +include/ncbi-tools++/objects/taxon3/taxon3.hpp +include/ncbi-tools++/objects/taxon3/taxon3__.hpp +include/ncbi-tools++/objects/tinyseq/.cvsignore +include/ncbi-tools++/objects/tinyseq/.gitignore +include/ncbi-tools++/objects/tinyseq/NCBI_TSeq_module.hpp +include/ncbi-tools++/objects/tinyseq/TSeq.hpp +include/ncbi-tools++/objects/tinyseq/TSeqSet.hpp +include/ncbi-tools++/objects/tinyseq/TSeqSet_.hpp +include/ncbi-tools++/objects/tinyseq/TSeq_.hpp +include/ncbi-tools++/objects/tinyseq/tinyseq__.hpp +include/ncbi-tools++/objects/trackmgr/.cvsignore +include/ncbi-tools++/objects/trackmgr/.gitignore +include/ncbi-tools++/objects/trackmgr/NCBI_TrackManager_module.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_ACL_AccessLevel.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_ACL_AccessLevel_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_AnnotCounts.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_AnnotCounts_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_AnnotType.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_AnnotType_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_Assembly.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_AssemblySpec.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_AssemblySpec_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_Assembly_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_AttrReply.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_AttrReply_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_AttrRequest.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_AttrRequest_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_AttrSpec.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_AttrSpec_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_AttrValueReply.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_AttrValueReply_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_Attribute.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_Attribute_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_BlastQuerySeq.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_BlastQuerySeq_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_BlastRIDDetail.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_BlastRIDDetail_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_BlastRIDReply.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_BlastRIDReply_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_BlastRIDRequest.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_BlastRIDRequest_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_ClientInfo.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_ClientInfo_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_CreateTracksetReply.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_CreateTracksetReply_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_CreateTracksetRequest.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_CreateTracksetRequest_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_CreateUserDataItem.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_CreateUserDataItem_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_CreateUserTrackReply.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_CreateUserTrackReply_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_CreateUserTrackReques.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_CreateUserTrackReques_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_DTrackId.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_DTrackId_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_DatasetItem.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_DatasetItemSeq.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_DatasetItemSeq_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_DatasetItem_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_DisplayTrack.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_DisplayTrackChoice.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_DisplayTrackChoice_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_DisplayTrackReply.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_DisplayTrackReply_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_DisplayTrackRequest.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_DisplayTrackRequest_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_DisplayTrack_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_GenomeContext.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_GenomeContext_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_Identity.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_IdentityId.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_IdentityIdType.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_IdentityIdType_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_IdentityId_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_Identity_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_ItemResolverReply.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_ItemResolverReply_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_ItemResolverRequest.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_ItemResolverRequest_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_LengthStats.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_LengthStats_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_Message.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_MessageLevel.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_MessageLevel_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_Message_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_PositionStats.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_PositionStats_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_RemoveUserTrackReply.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_RemoveUserTrackReply_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_RemoveUserTrackReques.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_RemoveUserTrackReques_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_RenameMyNCBICollectio.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_RenameMyNCBICollectio_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_Reply.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_Reply_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_Request.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_Request_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_RetrieveTracksetReply.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_RetrieveTracksetReply_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_RetrieveTracksetReque.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_RetrieveTracksetReque_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_SeqTrackIdReply.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_SeqTrackIdReply_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_SeqTrackIdRequest.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_SeqTrackIdRequest_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_Status.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_Status_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_SupportedAssembliesRe.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_SupportedAssembliesRe_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_SwitchTrackContextRep.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_SwitchTrackContextRep_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_SwitchTrackContextReq.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_SwitchTrackContextReq_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_SwitchTrackException.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_SwitchTrackExceptionC.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_SwitchTrackExceptionC_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_SwitchTrackException_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_TrackACL_Authorizatio.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_TrackACL_Authorizatio_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_TrackACL_Permission.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_TrackACL_Permission_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_TrackAttrValueReply.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_TrackAttrValueReply_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_TrackAttrValueRequest.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_TrackAttrValueRequest_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_TrackAttributes.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_TrackAttributes_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_TrackItems.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_TrackItems_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_TrackSet.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_TrackSetType.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_TrackSetType_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_TrackSet_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_TypeStat.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_TypeStat_.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_ValueRequest.hpp +include/ncbi-tools++/objects/trackmgr/TMgr_ValueRequest_.hpp +include/ncbi-tools++/objects/trackmgr/blast_client.hpp +include/ncbi-tools++/objects/trackmgr/createtrackset_client.hpp +include/ncbi-tools++/objects/trackmgr/createusertrack_client.hpp +include/ncbi-tools++/objects/trackmgr/displaytrack_client.hpp +include/ncbi-tools++/objects/trackmgr/gridrpcclient.hpp +include/ncbi-tools++/objects/trackmgr/item_resolver_client.hpp +include/ncbi-tools++/objects/trackmgr/primary_snp.hpp +include/ncbi-tools++/objects/trackmgr/removeusertrack_client.hpp +include/ncbi-tools++/objects/trackmgr/supported_assemblies_client.hpp +include/ncbi-tools++/objects/trackmgr/switch_context_client.hpp +include/ncbi-tools++/objects/trackmgr/track_attrvalue_client.hpp +include/ncbi-tools++/objects/trackmgr/trackmgr__.hpp +include/ncbi-tools++/objects/trackmgr/trackmgr_client.hpp +include/ncbi-tools++/objects/trackmgr/trackmgr_client_.hpp +include/ncbi-tools++/objects/trackmgr/trackmgr_export.h +include/ncbi-tools++/objects/trackmgr/trackset_client.hpp +include/ncbi-tools++/objects/valerr/.cvsignore +include/ncbi-tools++/objects/valerr/.gitignore +include/ncbi-tools++/objects/valerr/NCBI_ValErrors_module.hpp +include/ncbi-tools++/objects/valerr/ValidErrItem.hpp +include/ncbi-tools++/objects/valerr/ValidErrItem_.hpp +include/ncbi-tools++/objects/valerr/ValidError.hpp +include/ncbi-tools++/objects/valerr/ValidError_.hpp +include/ncbi-tools++/objects/valerr/valerr__.hpp +include/ncbi-tools++/objects/valid/.cvsignore +include/ncbi-tools++/objects/valid/.gitignore +include/ncbi-tools++/objects/valid/Comment_rule.hpp +include/ncbi-tools++/objects/valid/Comment_rule_.hpp +include/ncbi-tools++/objects/valid/Comment_set.hpp +include/ncbi-tools++/objects/valid/Comment_set_.hpp +include/ncbi-tools++/objects/valid/Dependent_field_rule.hpp +include/ncbi-tools++/objects/valid/Dependent_field_rule_.hpp +include/ncbi-tools++/objects/valid/Dependent_field_set.hpp +include/ncbi-tools++/objects/valid/Dependent_field_set_.hpp +include/ncbi-tools++/objects/valid/Field_rule.hpp +include/ncbi-tools++/objects/valid/Field_rule_.hpp +include/ncbi-tools++/objects/valid/Field_set.hpp +include/ncbi-tools++/objects/valid/Field_set_.hpp +include/ncbi-tools++/objects/valid/NCBI_Structured_comment_validation_module.hpp +include/ncbi-tools++/objects/valid/Phrase_list.hpp +include/ncbi-tools++/objects/valid/Phrase_list_.hpp +include/ncbi-tools++/objects/valid/Severity_level.hpp +include/ncbi-tools++/objects/valid/Severity_level_.hpp +include/ncbi-tools++/objects/valid/valid__.hpp +include/ncbi-tools++/objects/variation/.cvsignore +include/ncbi-tools++/objects/variation/.gitignore +include/ncbi-tools++/objects/variation/NCBI_VariationPackage_module.hpp +include/ncbi-tools++/objects/variation/VariantPlacement.hpp +include/ncbi-tools++/objects/variation/VariantPlacement_.hpp +include/ncbi-tools++/objects/variation/Variation.hpp +include/ncbi-tools++/objects/variation/VariationException.hpp +include/ncbi-tools++/objects/variation/VariationException_.hpp +include/ncbi-tools++/objects/variation/VariationMethod.hpp +include/ncbi-tools++/objects/variation/VariationMethod_.hpp +include/ncbi-tools++/objects/variation/Variation_.hpp +include/ncbi-tools++/objects/variation/variation__.hpp +include/ncbi-tools++/objects/varrep/.cvsignore +include/ncbi-tools++/objects/varrep/.gitignore +include/ncbi-tools++/objects/varrep/AaInterval.hpp +include/ncbi-tools++/objects/varrep/AaInterval_.hpp +include/ncbi-tools++/objects/varrep/AaLocation.hpp +include/ncbi-tools++/objects/varrep/AaLocation_.hpp +include/ncbi-tools++/objects/varrep/AaSite.hpp +include/ncbi-tools++/objects/varrep/AaSiteRange.hpp +include/ncbi-tools++/objects/varrep/AaSiteRange_.hpp +include/ncbi-tools++/objects/varrep/AaSite_.hpp +include/ncbi-tools++/objects/varrep/Conversion.hpp +include/ncbi-tools++/objects/varrep/Conversion_.hpp +include/ncbi-tools++/objects/varrep/Count.hpp +include/ncbi-tools++/objects/varrep/Count_.hpp +include/ncbi-tools++/objects/varrep/CtermExtension.hpp +include/ncbi-tools++/objects/varrep/CtermExtension_.hpp +include/ncbi-tools++/objects/varrep/Deletion.hpp +include/ncbi-tools++/objects/varrep/Deletion_.hpp +include/ncbi-tools++/objects/varrep/Delins.hpp +include/ncbi-tools++/objects/varrep/Delins_.hpp +include/ncbi-tools++/objects/varrep/Duplication.hpp +include/ncbi-tools++/objects/varrep/Duplication_.hpp +include/ncbi-tools++/objects/varrep/Frameshift.hpp +include/ncbi-tools++/objects/varrep/Frameshift_.hpp +include/ncbi-tools++/objects/varrep/Insertion.hpp +include/ncbi-tools++/objects/varrep/Insertion_.hpp +include/ncbi-tools++/objects/varrep/Inversion.hpp +include/ncbi-tools++/objects/varrep/Inversion_.hpp +include/ncbi-tools++/objects/varrep/NCBI_VariationIRep_module.hpp +include/ncbi-tools++/objects/varrep/NaIdentity.hpp +include/ncbi-tools++/objects/varrep/NaIdentity_.hpp +include/ncbi-tools++/objects/varrep/NaSub.hpp +include/ncbi-tools++/objects/varrep/NaSub_.hpp +include/ncbi-tools++/objects/varrep/NtIntLimit.hpp +include/ncbi-tools++/objects/varrep/NtIntLimit_.hpp +include/ncbi-tools++/objects/varrep/NtInterval.hpp +include/ncbi-tools++/objects/varrep/NtInterval_.hpp +include/ncbi-tools++/objects/varrep/NtLocation.hpp +include/ncbi-tools++/objects/varrep/NtLocation_.hpp +include/ncbi-tools++/objects/varrep/NtSite.hpp +include/ncbi-tools++/objects/varrep/NtSiteRange.hpp +include/ncbi-tools++/objects/varrep/NtSiteRange_.hpp +include/ncbi-tools++/objects/varrep/NtSite_.hpp +include/ncbi-tools++/objects/varrep/NtermExtension.hpp +include/ncbi-tools++/objects/varrep/NtermExtension_.hpp +include/ncbi-tools++/objects/varrep/ProteinExtension.hpp +include/ncbi-tools++/objects/varrep/ProteinExtension_.hpp +include/ncbi-tools++/objects/varrep/ProteinSub.hpp +include/ncbi-tools++/objects/varrep/ProteinSub_.hpp +include/ncbi-tools++/objects/varrep/Repeat.hpp +include/ncbi-tools++/objects/varrep/Repeat_.hpp +include/ncbi-tools++/objects/varrep/SeqInterval.hpp +include/ncbi-tools++/objects/varrep/SeqInterval_.hpp +include/ncbi-tools++/objects/varrep/SeqLocation.hpp +include/ncbi-tools++/objects/varrep/SeqLocation_.hpp +include/ncbi-tools++/objects/varrep/SequenceVariant.hpp +include/ncbi-tools++/objects/varrep/SequenceVariant_.hpp +include/ncbi-tools++/objects/varrep/SimpleVariant.hpp +include/ncbi-tools++/objects/varrep/SimpleVariantSeq.hpp +include/ncbi-tools++/objects/varrep/SimpleVariantSeq_.hpp +include/ncbi-tools++/objects/varrep/SimpleVariant_.hpp +include/ncbi-tools++/objects/varrep/SpecialVariant.hpp +include/ncbi-tools++/objects/varrep/SpecialVariant_.hpp +include/ncbi-tools++/objects/varrep/Subsequence.hpp +include/ncbi-tools++/objects/varrep/Subsequence_.hpp +include/ncbi-tools++/objects/varrep/Variant.hpp +include/ncbi-tools++/objects/varrep/VariantExpression.hpp +include/ncbi-tools++/objects/varrep/VariantExpression_.hpp +include/ncbi-tools++/objects/varrep/VariantSeqType.hpp +include/ncbi-tools++/objects/varrep/VariantSeqType_.hpp +include/ncbi-tools++/objects/varrep/Variant_.hpp +include/ncbi-tools++/objects/varrep/varrep__.hpp +include/ncbi-tools++/objmgr/align_ci.hpp +include/ncbi-tools++/objmgr/annot_ci.hpp +include/ncbi-tools++/objmgr/annot_name.hpp +include/ncbi-tools++/objmgr/annot_selector.hpp +include/ncbi-tools++/objmgr/annot_type_selector.hpp +include/ncbi-tools++/objmgr/annot_types_ci.hpp +include/ncbi-tools++/objmgr/bio_object_id.hpp +include/ncbi-tools++/objmgr/bioseq_ci.hpp +include/ncbi-tools++/objmgr/bioseq_handle.hpp +include/ncbi-tools++/objmgr/bioseq_set_handle.hpp +include/ncbi-tools++/objmgr/blob_id.hpp +include/ncbi-tools++/objmgr/data_loader.hpp +include/ncbi-tools++/objmgr/data_loader_factory.hpp +include/ncbi-tools++/objmgr/edit_saver.hpp +include/ncbi-tools++/objmgr/edits_db_engine.hpp +include/ncbi-tools++/objmgr/edits_db_saver.hpp +include/ncbi-tools++/objmgr/error_codes.hpp +include/ncbi-tools++/objmgr/feat_ci.hpp +include/ncbi-tools++/objmgr/gc_assembly_parser.hpp +include/ncbi-tools++/objmgr/graph_ci.hpp +include/ncbi-tools++/objmgr/impl/annot_collector.hpp +include/ncbi-tools++/objmgr/impl/annot_finder.hpp +include/ncbi-tools++/objmgr/impl/annot_object.hpp +include/ncbi-tools++/objmgr/impl/annot_object_index.hpp +include/ncbi-tools++/objmgr/impl/annot_type_index.hpp +include/ncbi-tools++/objmgr/impl/bioseq_base_info.hpp +include/ncbi-tools++/objmgr/impl/bioseq_edit_commands.hpp +include/ncbi-tools++/objmgr/impl/bioseq_info.hpp +include/ncbi-tools++/objmgr/impl/bioseq_set_edit_commands.hpp +include/ncbi-tools++/objmgr/impl/bioseq_set_info.hpp +include/ncbi-tools++/objmgr/impl/data_source.hpp +include/ncbi-tools++/objmgr/impl/edit_commands_impl.hpp +include/ncbi-tools++/objmgr/impl/handle_range.hpp +include/ncbi-tools++/objmgr/impl/handle_range_map.hpp +include/ncbi-tools++/objmgr/impl/heap_scope.hpp +include/ncbi-tools++/objmgr/impl/mutex_pool.hpp +include/ncbi-tools++/objmgr/impl/prefetch_impl.hpp +include/ncbi-tools++/objmgr/impl/prefetch_manager_impl.hpp +include/ncbi-tools++/objmgr/impl/priority.hpp +include/ncbi-tools++/objmgr/impl/scope_impl.hpp +include/ncbi-tools++/objmgr/impl/scope_info.hpp +include/ncbi-tools++/objmgr/impl/scope_transaction_impl.hpp +include/ncbi-tools++/objmgr/impl/seq_align_mapper.hpp +include/ncbi-tools++/objmgr/impl/seq_annot_edit_commands.hpp +include/ncbi-tools++/objmgr/impl/seq_annot_info.hpp +include/ncbi-tools++/objmgr/impl/seq_entry_edit_commands.hpp +include/ncbi-tools++/objmgr/impl/seq_entry_info.hpp +include/ncbi-tools++/objmgr/impl/seq_id_sort.hpp +include/ncbi-tools++/objmgr/impl/seq_loc_cvt.hpp +include/ncbi-tools++/objmgr/impl/seq_table_info.hpp +include/ncbi-tools++/objmgr/impl/seq_table_setter.hpp +include/ncbi-tools++/objmgr/impl/seq_table_setters.hpp +include/ncbi-tools++/objmgr/impl/seq_vector_cvt.hpp +include/ncbi-tools++/objmgr/impl/seq_vector_cvt_gcc_i386.hpp +include/ncbi-tools++/objmgr/impl/seq_vector_cvt_gen.hpp +include/ncbi-tools++/objmgr/impl/snp_annot_info.hpp +include/ncbi-tools++/objmgr/impl/snp_info.hpp +include/ncbi-tools++/objmgr/impl/split_parser.hpp +include/ncbi-tools++/objmgr/impl/synonyms.hpp +include/ncbi-tools++/objmgr/impl/tse_assigner.hpp +include/ncbi-tools++/objmgr/impl/tse_chunk_info.hpp +include/ncbi-tools++/objmgr/impl/tse_info.hpp +include/ncbi-tools++/objmgr/impl/tse_info_object.hpp +include/ncbi-tools++/objmgr/impl/tse_loadlock.hpp +include/ncbi-tools++/objmgr/impl/tse_lock.hpp +include/ncbi-tools++/objmgr/impl/tse_scope_lock.hpp +include/ncbi-tools++/objmgr/impl/tse_split_info.hpp +include/ncbi-tools++/objmgr/mapped_feat.hpp +include/ncbi-tools++/objmgr/object_manager.hpp +include/ncbi-tools++/objmgr/objmgr_exception.hpp +include/ncbi-tools++/objmgr/objmgr_version.hpp +include/ncbi-tools++/objmgr/prefetch.hpp +include/ncbi-tools++/objmgr/prefetch_actions.hpp +include/ncbi-tools++/objmgr/prefetch_manager.hpp +include/ncbi-tools++/objmgr/scope.hpp +include/ncbi-tools++/objmgr/scope_transaction.hpp +include/ncbi-tools++/objmgr/seq_align_handle.hpp +include/ncbi-tools++/objmgr/seq_annot_ci.hpp +include/ncbi-tools++/objmgr/seq_annot_handle.hpp +include/ncbi-tools++/objmgr/seq_descr_ci.hpp +include/ncbi-tools++/objmgr/seq_entry_ci.hpp +include/ncbi-tools++/objmgr/seq_entry_handle.hpp +include/ncbi-tools++/objmgr/seq_feat_handle.hpp +include/ncbi-tools++/objmgr/seq_graph_handle.hpp +include/ncbi-tools++/objmgr/seq_loc_mapper.hpp +include/ncbi-tools++/objmgr/seq_map.hpp +include/ncbi-tools++/objmgr/seq_map_ci.hpp +include/ncbi-tools++/objmgr/seq_map_switch.hpp +include/ncbi-tools++/objmgr/seq_table_ci.hpp +include/ncbi-tools++/objmgr/seq_vector.hpp +include/ncbi-tools++/objmgr/seq_vector_ci.hpp +include/ncbi-tools++/objmgr/seqdesc_ci.hpp +include/ncbi-tools++/objmgr/split/annot_piece.hpp +include/ncbi-tools++/objmgr/split/asn_sizer.hpp +include/ncbi-tools++/objmgr/split/blob_splitter.hpp +include/ncbi-tools++/objmgr/split/blob_splitter_impl.hpp +include/ncbi-tools++/objmgr/split/blob_splitter_params.hpp +include/ncbi-tools++/objmgr/split/chunk_info.hpp +include/ncbi-tools++/objmgr/split/id2_compress.hpp +include/ncbi-tools++/objmgr/split/id_range.hpp +include/ncbi-tools++/objmgr/split/object_splitinfo.hpp +include/ncbi-tools++/objmgr/split/place_id.hpp +include/ncbi-tools++/objmgr/split/size.hpp +include/ncbi-tools++/objmgr/split/split_blob.hpp +include/ncbi-tools++/objmgr/split/split_exceptions.hpp +include/ncbi-tools++/objmgr/table_field.hpp +include/ncbi-tools++/objmgr/tse_handle.hpp +include/ncbi-tools++/objmgr/unsupp_editsaver.hpp +include/ncbi-tools++/objmgr/util/autodef.hpp +include/ncbi-tools++/objmgr/util/autodef_available_modifier.hpp +include/ncbi-tools++/objmgr/util/autodef_feature_clause.hpp +include/ncbi-tools++/objmgr/util/autodef_feature_clause_base.hpp +include/ncbi-tools++/objmgr/util/autodef_mod_combo.hpp +include/ncbi-tools++/objmgr/util/autodef_options.hpp +include/ncbi-tools++/objmgr/util/autodef_source_desc.hpp +include/ncbi-tools++/objmgr/util/autodef_source_group.hpp +include/ncbi-tools++/objmgr/util/create_defline.hpp +include/ncbi-tools++/objmgr/util/feature.hpp +include/ncbi-tools++/objmgr/util/feature_edit.hpp +include/ncbi-tools++/objmgr/util/indexer.hpp +include/ncbi-tools++/objmgr/util/obj_sniff.hpp +include/ncbi-tools++/objmgr/util/objutil.hpp +include/ncbi-tools++/objmgr/util/seq_align_util.hpp +include/ncbi-tools++/objmgr/util/seq_loc_util.hpp +include/ncbi-tools++/objmgr/util/sequence.hpp +include/ncbi-tools++/objmgr/util/weight.hpp +include/ncbi-tools++/objtools/align_format/align_format_util.hpp +include/ncbi-tools++/objtools/align_format/aln_printer.hpp +include/ncbi-tools++/objtools/align_format/format_flags.hpp +include/ncbi-tools++/objtools/align_format/ilinkoutdb.hpp +include/ncbi-tools++/objtools/align_format/seqalignfilter.hpp +include/ncbi-tools++/objtools/align_format/showalign.hpp +include/ncbi-tools++/objtools/align_format/showdefline.hpp +include/ncbi-tools++/objtools/align_format/tabular.hpp +include/ncbi-tools++/objtools/align_format/taxFormat.hpp +include/ncbi-tools++/objtools/align_format/vectorscreen.hpp +include/ncbi-tools++/objtools/alnmgr/aln_asn_reader.hpp +include/ncbi-tools++/objtools/alnmgr/aln_builders.hpp +include/ncbi-tools++/objtools/alnmgr/aln_container.hpp +include/ncbi-tools++/objtools/alnmgr/aln_converters.hpp +include/ncbi-tools++/objtools/alnmgr/aln_explorer.hpp +include/ncbi-tools++/objtools/alnmgr/aln_generators.hpp +include/ncbi-tools++/objtools/alnmgr/aln_rng_coll_oper.hpp +include/ncbi-tools++/objtools/alnmgr/aln_seqid.hpp +include/ncbi-tools++/objtools/alnmgr/aln_serial.hpp +include/ncbi-tools++/objtools/alnmgr/aln_stats.hpp +include/ncbi-tools++/objtools/alnmgr/aln_tests.hpp +include/ncbi-tools++/objtools/alnmgr/aln_user_options.hpp +include/ncbi-tools++/objtools/alnmgr/alndiag.hpp +include/ncbi-tools++/objtools/alnmgr/alnexception.hpp +include/ncbi-tools++/objtools/alnmgr/alnmap.hpp +include/ncbi-tools++/objtools/alnmgr/alnmatch.hpp +include/ncbi-tools++/objtools/alnmgr/alnmerger.hpp +include/ncbi-tools++/objtools/alnmgr/alnmix.hpp +include/ncbi-tools++/objtools/alnmgr/alnpos_ci.hpp +include/ncbi-tools++/objtools/alnmgr/alnsegments.hpp +include/ncbi-tools++/objtools/alnmgr/alnseq.hpp +include/ncbi-tools++/objtools/alnmgr/alntext.hpp +include/ncbi-tools++/objtools/alnmgr/alnvec.hpp +include/ncbi-tools++/objtools/alnmgr/alnvec_iterator.hpp +include/ncbi-tools++/objtools/alnmgr/pairwise_aln.hpp +include/ncbi-tools++/objtools/alnmgr/score_builder_base.hpp +include/ncbi-tools++/objtools/alnmgr/seqid_comp.hpp +include/ncbi-tools++/objtools/alnmgr/seqids_extractor.hpp +include/ncbi-tools++/objtools/alnmgr/sparse_aln.hpp +include/ncbi-tools++/objtools/alnmgr/sparse_ci.hpp +include/ncbi-tools++/objtools/alnmgr/task_progress.hpp +include/ncbi-tools++/objtools/blast/blastdb_format/blastdb_dataextract.hpp +include/ncbi-tools++/objtools/blast/blastdb_format/blastdb_formatter.hpp +include/ncbi-tools++/objtools/blast/blastdb_format/blastdb_seqid.hpp +include/ncbi-tools++/objtools/blast/blastdb_format/invalid_data_exception.hpp +include/ncbi-tools++/objtools/blast/blastdb_format/seq_formatter.hpp +include/ncbi-tools++/objtools/blast/blastdb_format/seq_writer.hpp +include/ncbi-tools++/objtools/blast/gene_info_reader/file_utils.hpp +include/ncbi-tools++/objtools/blast/gene_info_reader/gene_info.hpp +include/ncbi-tools++/objtools/blast/gene_info_reader/gene_info_reader.hpp +include/ncbi-tools++/objtools/blast/seqdb_reader/column_reader.hpp +include/ncbi-tools++/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp +include/ncbi-tools++/objtools/blast/seqdb_reader/impl/seqdbcol.hpp +include/ncbi-tools++/objtools/blast/seqdb_reader/impl/seqdbfile.hpp +include/ncbi-tools++/objtools/blast/seqdb_reader/impl/seqdbgeneral.hpp +include/ncbi-tools++/objtools/blast/seqdb_reader/impl/seqdbisam.hpp +include/ncbi-tools++/objtools/blast/seqdb_reader/impl/seqdbtax.hpp +include/ncbi-tools++/objtools/blast/seqdb_reader/impl/seqdbvol.hpp +include/ncbi-tools++/objtools/blast/seqdb_reader/seqdb.hpp +include/ncbi-tools++/objtools/blast/seqdb_reader/seqdbblob.hpp +include/ncbi-tools++/objtools/blast/seqdb_reader/seqdbcommon.hpp +include/ncbi-tools++/objtools/blast/seqdb_reader/seqdbexpert.hpp +include/ncbi-tools++/objtools/blast/seqdb_writer/build_db.hpp +include/ncbi-tools++/objtools/blast/seqdb_writer/impl/criteria.hpp +include/ncbi-tools++/objtools/blast/seqdb_writer/multisource_util.hpp +include/ncbi-tools++/objtools/blast/seqdb_writer/taxid_set.hpp +include/ncbi-tools++/objtools/blast/seqdb_writer/writedb.hpp +include/ncbi-tools++/objtools/blast/seqdb_writer/writedb_convert.hpp +include/ncbi-tools++/objtools/blast/seqdb_writer/writedb_error.hpp +include/ncbi-tools++/objtools/blast/seqdb_writer/writedb_files.hpp +include/ncbi-tools++/objtools/blast/seqdb_writer/writedb_general.hpp +include/ncbi-tools++/objtools/blast/seqdb_writer/writedb_isam.hpp +include/ncbi-tools++/objtools/blast/services/blast_services.hpp +include/ncbi-tools++/objtools/cleanup/autogenerated_cleanup.hpp +include/ncbi-tools++/objtools/cleanup/cleanup.hpp +include/ncbi-tools++/objtools/cleanup/cleanup_change.hpp +include/ncbi-tools++/objtools/cleanup/newcleanup.hpp +include/ncbi-tools++/objtools/data_loaders/blastdb/bdbloader.hpp +include/ncbi-tools++/objtools/data_loaders/blastdb/bdbloader_rmt.hpp +include/ncbi-tools++/objtools/data_loaders/blastdb/blastdb_adapter.hpp +include/ncbi-tools++/objtools/data_loaders/genbank/blob_id.hpp +include/ncbi-tools++/objtools/data_loaders/genbank/cache/reader_cache.hpp +include/ncbi-tools++/objtools/data_loaders/genbank/cache/reader_cache_entry.hpp +include/ncbi-tools++/objtools/data_loaders/genbank/cache/reader_cache_params.h +include/ncbi-tools++/objtools/data_loaders/genbank/cache/writer_cache.hpp +include/ncbi-tools++/objtools/data_loaders/genbank/cache/writer_cache_entry.hpp +include/ncbi-tools++/objtools/data_loaders/genbank/gbloader.hpp +include/ncbi-tools++/objtools/data_loaders/genbank/gbloader_params.h +include/ncbi-tools++/objtools/data_loaders/genbank/gicache/reader_gicache.hpp +include/ncbi-tools++/objtools/data_loaders/genbank/gicache/reader_gicache_entry.hpp +include/ncbi-tools++/objtools/data_loaders/genbank/gicache/reader_gicache_params.h +include/ncbi-tools++/objtools/data_loaders/genbank/id1/reader_id1.hpp +include/ncbi-tools++/objtools/data_loaders/genbank/id1/reader_id1_entry.hpp +include/ncbi-tools++/objtools/data_loaders/genbank/id1/reader_id1_params.h +include/ncbi-tools++/objtools/data_loaders/genbank/id2/reader_id2.hpp +include/ncbi-tools++/objtools/data_loaders/genbank/id2/reader_id2_entry.hpp +include/ncbi-tools++/objtools/data_loaders/genbank/id2/reader_id2_params.h +include/ncbi-tools++/objtools/data_loaders/genbank/impl/cache_manager.hpp +include/ncbi-tools++/objtools/data_loaders/genbank/impl/dispatcher.hpp +include/ncbi-tools++/objtools/data_loaders/genbank/impl/gbload_util.hpp +include/ncbi-tools++/objtools/data_loaders/genbank/impl/incr_time.hpp +include/ncbi-tools++/objtools/data_loaders/genbank/impl/info_cache.hpp +include/ncbi-tools++/objtools/data_loaders/genbank/impl/processor.hpp +include/ncbi-tools++/objtools/data_loaders/genbank/impl/processors.hpp +include/ncbi-tools++/objtools/data_loaders/genbank/impl/reader_id1_base.hpp +include/ncbi-tools++/objtools/data_loaders/genbank/impl/reader_id2_base.hpp +include/ncbi-tools++/objtools/data_loaders/genbank/impl/reader_service.hpp +include/ncbi-tools++/objtools/data_loaders/genbank/impl/request_result.hpp +include/ncbi-tools++/objtools/data_loaders/genbank/impl/standalone_result.hpp +include/ncbi-tools++/objtools/data_loaders/genbank/impl/statistics.hpp +include/ncbi-tools++/objtools/data_loaders/genbank/reader.hpp +include/ncbi-tools++/objtools/data_loaders/genbank/reader_interface.hpp +include/ncbi-tools++/objtools/data_loaders/genbank/reader_params.h +include/ncbi-tools++/objtools/data_loaders/genbank/reader_service_params.h +include/ncbi-tools++/objtools/data_loaders/genbank/reader_snp.hpp +include/ncbi-tools++/objtools/data_loaders/genbank/readers.hpp +include/ncbi-tools++/objtools/data_loaders/genbank/readers/cache/reader_cache.hpp +include/ncbi-tools++/objtools/data_loaders/genbank/readers/cache/writer_cache.hpp +include/ncbi-tools++/objtools/data_loaders/genbank/readers/id1/reader_id1.hpp +include/ncbi-tools++/objtools/data_loaders/genbank/readers/id2/reader_id2.hpp +include/ncbi-tools++/objtools/data_loaders/genbank/readers/pubseqos/reader_pubseq.hpp +include/ncbi-tools++/objtools/data_loaders/genbank/readers/pubseqos2/reader_pubseq2.hpp +include/ncbi-tools++/objtools/data_loaders/genbank/seqref.hpp +include/ncbi-tools++/objtools/data_loaders/genbank/writer.hpp +include/ncbi-tools++/objtools/data_loaders/genbank/writer_interface.hpp +include/ncbi-tools++/objtools/data_loaders/loaders.hpp +include/ncbi-tools++/objtools/edit/apply_object.hpp +include/ncbi-tools++/objtools/edit/autodef.hpp +include/ncbi-tools++/objtools/edit/autodef_options.hpp +include/ncbi-tools++/objtools/edit/autodef_source_desc.hpp +include/ncbi-tools++/objtools/edit/autodef_with_tax.hpp +include/ncbi-tools++/objtools/edit/capitalization_string.hpp +include/ncbi-tools++/objtools/edit/cds_fix.hpp +include/ncbi-tools++/objtools/edit/dblink_field.hpp +include/ncbi-tools++/objtools/edit/edit_exception.hpp +include/ncbi-tools++/objtools/edit/feattable_edit.hpp +include/ncbi-tools++/objtools/edit/field_handler.hpp +include/ncbi-tools++/objtools/edit/gap_trim.hpp +include/ncbi-tools++/objtools/edit/gaps_edit.hpp +include/ncbi-tools++/objtools/edit/gb_block_field.hpp +include/ncbi-tools++/objtools/edit/gene_utils.hpp +include/ncbi-tools++/objtools/edit/link_cds_mrna.hpp +include/ncbi-tools++/objtools/edit/loc_edit.hpp +include/ncbi-tools++/objtools/edit/mail_report.hpp +include/ncbi-tools++/objtools/edit/parse_text_options.hpp +include/ncbi-tools++/objtools/edit/promote.hpp +include/ncbi-tools++/objtools/edit/publication_edit.hpp +include/ncbi-tools++/objtools/edit/remote_updater.hpp +include/ncbi-tools++/objtools/edit/rna_edit.hpp +include/ncbi-tools++/objtools/edit/seq_entry_edit.hpp +include/ncbi-tools++/objtools/edit/seqid_guesser.hpp +include/ncbi-tools++/objtools/edit/source_edit.hpp +include/ncbi-tools++/objtools/edit/string_constraint.hpp +include/ncbi-tools++/objtools/edit/struc_comm_field.hpp +include/ncbi-tools++/objtools/edit/text_desc_field.hpp +include/ncbi-tools++/objtools/error_codes.hpp +include/ncbi-tools++/objtools/format/cigar_formatter.hpp +include/ncbi-tools++/objtools/format/context.hpp +include/ncbi-tools++/objtools/format/embl_formatter.hpp +include/ncbi-tools++/objtools/format/embl_gather.hpp +include/ncbi-tools++/objtools/format/feature_gather.hpp +include/ncbi-tools++/objtools/format/flat_expt.hpp +include/ncbi-tools++/objtools/format/flat_file_config.hpp +include/ncbi-tools++/objtools/format/flat_file_generator.hpp +include/ncbi-tools++/objtools/format/format_item_ostream.hpp +include/ncbi-tools++/objtools/format/formatter.hpp +include/ncbi-tools++/objtools/format/ftable_formatter.hpp +include/ncbi-tools++/objtools/format/ftable_gather.hpp +include/ncbi-tools++/objtools/format/gather_items.hpp +include/ncbi-tools++/objtools/format/gather_iter.hpp +include/ncbi-tools++/objtools/format/gbseq_formatter.hpp +include/ncbi-tools++/objtools/format/genbank_formatter.hpp +include/ncbi-tools++/objtools/format/genbank_gather.hpp +include/ncbi-tools++/objtools/format/item_formatter.hpp +include/ncbi-tools++/objtools/format/item_ostream.hpp +include/ncbi-tools++/objtools/format/items/accession_item.hpp +include/ncbi-tools++/objtools/format/items/alignment_item.hpp +include/ncbi-tools++/objtools/format/items/basecount_item.hpp +include/ncbi-tools++/objtools/format/items/comment_item.hpp +include/ncbi-tools++/objtools/format/items/contig_item.hpp +include/ncbi-tools++/objtools/format/items/ctrl_items.hpp +include/ncbi-tools++/objtools/format/items/date_item.hpp +include/ncbi-tools++/objtools/format/items/dbsource_item.hpp +include/ncbi-tools++/objtools/format/items/defline_item.hpp +include/ncbi-tools++/objtools/format/items/feature_item.hpp +include/ncbi-tools++/objtools/format/items/flat_qual_slots.hpp +include/ncbi-tools++/objtools/format/items/flat_seqloc.hpp +include/ncbi-tools++/objtools/format/items/gap_item.hpp +include/ncbi-tools++/objtools/format/items/gene_finder.hpp +include/ncbi-tools++/objtools/format/items/genome_item.hpp +include/ncbi-tools++/objtools/format/items/genome_project_item.hpp +include/ncbi-tools++/objtools/format/items/html_anchor_item.hpp +include/ncbi-tools++/objtools/format/items/item.hpp +include/ncbi-tools++/objtools/format/items/item_base.hpp +include/ncbi-tools++/objtools/format/items/keywords_item.hpp +include/ncbi-tools++/objtools/format/items/locus_item.hpp +include/ncbi-tools++/objtools/format/items/origin_item.hpp +include/ncbi-tools++/objtools/format/items/primary_item.hpp +include/ncbi-tools++/objtools/format/items/qualifiers.hpp +include/ncbi-tools++/objtools/format/items/reference_item.hpp +include/ncbi-tools++/objtools/format/items/segment_item.hpp +include/ncbi-tools++/objtools/format/items/sequence_item.hpp +include/ncbi-tools++/objtools/format/items/source_item.hpp +include/ncbi-tools++/objtools/format/items/tsa_item.hpp +include/ncbi-tools++/objtools/format/items/version_item.hpp +include/ncbi-tools++/objtools/format/items/wgs_item.hpp +include/ncbi-tools++/objtools/format/ostream_text_ostream.hpp +include/ncbi-tools++/objtools/format/sam_formatter.hpp +include/ncbi-tools++/objtools/format/text_ostream.hpp +include/ncbi-tools++/objtools/readers/agp_converter.hpp +include/ncbi-tools++/objtools/readers/agp_read.hpp +include/ncbi-tools++/objtools/readers/agp_seq_entry.hpp +include/ncbi-tools++/objtools/readers/agp_util.hpp +include/ncbi-tools++/objtools/readers/agp_validate_reader.hpp +include/ncbi-tools++/objtools/readers/aln_reader.hpp +include/ncbi-tools++/objtools/readers/bed_reader.hpp +include/ncbi-tools++/objtools/readers/cigar.hpp +include/ncbi-tools++/objtools/readers/error_container.hpp +include/ncbi-tools++/objtools/readers/fasta.hpp +include/ncbi-tools++/objtools/readers/fasta_exception.hpp +include/ncbi-tools++/objtools/readers/fasta_reader_utils.hpp +include/ncbi-tools++/objtools/readers/featuredump.hpp +include/ncbi-tools++/objtools/readers/format_guess_ex.hpp +include/ncbi-tools++/objtools/readers/getfeature.hpp +include/ncbi-tools++/objtools/readers/gff2_data.hpp +include/ncbi-tools++/objtools/readers/gff2_reader.hpp +include/ncbi-tools++/objtools/readers/gff3_reader.hpp +include/ncbi-tools++/objtools/readers/gff3_sofa.hpp +include/ncbi-tools++/objtools/readers/gff_reader.hpp +include/ncbi-tools++/objtools/readers/glimmer_reader.hpp +include/ncbi-tools++/objtools/readers/gtf_reader.hpp +include/ncbi-tools++/objtools/readers/gvf_reader.hpp +include/ncbi-tools++/objtools/readers/idmapper.hpp +include/ncbi-tools++/objtools/readers/iidmapper.hpp +include/ncbi-tools++/objtools/readers/line_error.hpp +include/ncbi-tools++/objtools/readers/message_listener.hpp +include/ncbi-tools++/objtools/readers/microarray_reader.hpp +include/ncbi-tools++/objtools/readers/phrap.hpp +include/ncbi-tools++/objtools/readers/read_util.hpp +include/ncbi-tools++/objtools/readers/reader_base.hpp +include/ncbi-tools++/objtools/readers/reader_exception.hpp +include/ncbi-tools++/objtools/readers/reader_idgen.hpp +include/ncbi-tools++/objtools/readers/readfeat.hpp +include/ncbi-tools++/objtools/readers/rm_reader.hpp +include/ncbi-tools++/objtools/readers/source_mod_parser.hpp +include/ncbi-tools++/objtools/readers/source_mod_parser_wrapper.hpp +include/ncbi-tools++/objtools/readers/struct_cmt_reader.hpp +include/ncbi-tools++/objtools/readers/table_filter.hpp +include/ncbi-tools++/objtools/readers/track_data.hpp +include/ncbi-tools++/objtools/readers/ucscregion_reader.hpp +include/ncbi-tools++/objtools/readers/vcf_reader.hpp +include/ncbi-tools++/objtools/readers/wiggle_reader.hpp +include/ncbi-tools++/objtools/seqmasks_io/mask_bdb_reader.hpp +include/ncbi-tools++/objtools/seqmasks_io/mask_cmdline_args.hpp +include/ncbi-tools++/objtools/seqmasks_io/mask_fasta_reader.hpp +include/ncbi-tools++/objtools/seqmasks_io/mask_reader.hpp +include/ncbi-tools++/objtools/seqmasks_io/mask_writer.hpp +include/ncbi-tools++/objtools/seqmasks_io/mask_writer_blastdb_maskinfo.hpp +include/ncbi-tools++/objtools/seqmasks_io/mask_writer_fasta.hpp +include/ncbi-tools++/objtools/seqmasks_io/mask_writer_int.hpp +include/ncbi-tools++/objtools/seqmasks_io/mask_writer_seqloc.hpp +include/ncbi-tools++/objtools/seqmasks_io/mask_writer_tab.hpp +include/ncbi-tools++/objtools/simple/simple_om.hpp +include/ncbi-tools++/serial/delaybuf.hpp +include/ncbi-tools++/serial/enumvalues.hpp +include/ncbi-tools++/serial/error_codes.hpp +include/ncbi-tools++/serial/exception.hpp +include/ncbi-tools++/serial/impl/aliasinfo.hpp +include/ncbi-tools++/serial/impl/asntypes.hpp +include/ncbi-tools++/serial/impl/autoptrinfo.hpp +include/ncbi-tools++/serial/impl/choice.hpp +include/ncbi-tools++/serial/impl/choice.inl +include/ncbi-tools++/serial/impl/choiceptr.hpp +include/ncbi-tools++/serial/impl/classinfo.hpp +include/ncbi-tools++/serial/impl/classinfo.inl +include/ncbi-tools++/serial/impl/classinfob.hpp +include/ncbi-tools++/serial/impl/classinfob.inl +include/ncbi-tools++/serial/impl/classinfohelper.hpp +include/ncbi-tools++/serial/impl/continfo.hpp +include/ncbi-tools++/serial/impl/continfo.inl +include/ncbi-tools++/serial/impl/enumerated.hpp +include/ncbi-tools++/serial/impl/hookdata.hpp +include/ncbi-tools++/serial/impl/hookdatakey.hpp +include/ncbi-tools++/serial/impl/hookfunc.hpp +include/ncbi-tools++/serial/impl/item.hpp +include/ncbi-tools++/serial/impl/item.inl +include/ncbi-tools++/serial/impl/member.hpp +include/ncbi-tools++/serial/impl/member.inl +include/ncbi-tools++/serial/impl/memberid.hpp +include/ncbi-tools++/serial/impl/memberid.inl +include/ncbi-tools++/serial/impl/memberlist.hpp +include/ncbi-tools++/serial/impl/memberlist.inl +include/ncbi-tools++/serial/impl/objcopy.inl +include/ncbi-tools++/serial/impl/objectinfo.inl +include/ncbi-tools++/serial/impl/objectio.inl +include/ncbi-tools++/serial/impl/objectiter.inl +include/ncbi-tools++/serial/impl/objecttype.hpp +include/ncbi-tools++/serial/impl/objistr.inl +include/ncbi-tools++/serial/impl/objistrasnb.inl +include/ncbi-tools++/serial/impl/objistrimpl.hpp +include/ncbi-tools++/serial/impl/objistrxml.inl +include/ncbi-tools++/serial/impl/objlist.hpp +include/ncbi-tools++/serial/impl/objlist.inl +include/ncbi-tools++/serial/impl/objostr.inl +include/ncbi-tools++/serial/impl/objostrxml.inl +include/ncbi-tools++/serial/impl/objstack.hpp +include/ncbi-tools++/serial/impl/objstack.inl +include/ncbi-tools++/serial/impl/objstrasnb.hpp +include/ncbi-tools++/serial/impl/objstrasnb.inl +include/ncbi-tools++/serial/impl/pathhook.hpp +include/ncbi-tools++/serial/impl/ptrinfo.hpp +include/ncbi-tools++/serial/impl/ptrinfo.inl +include/ncbi-tools++/serial/impl/serialasndef.hpp +include/ncbi-tools++/serial/impl/stdtypeinfo.hpp +include/ncbi-tools++/serial/impl/stdtypes.hpp +include/ncbi-tools++/serial/impl/stdtypes.inl +include/ncbi-tools++/serial/impl/stdtypesimpl.hpp +include/ncbi-tools++/serial/impl/stltypes.hpp +include/ncbi-tools++/serial/impl/stltypesimpl.hpp +include/ncbi-tools++/serial/impl/timetypeinfo.hpp +include/ncbi-tools++/serial/impl/typeinfo.inl +include/ncbi-tools++/serial/impl/typeinfoimpl.hpp +include/ncbi-tools++/serial/impl/typemap.hpp +include/ncbi-tools++/serial/impl/typemapimpl.hpp +include/ncbi-tools++/serial/impl/typeref.hpp +include/ncbi-tools++/serial/impl/typeref.inl +include/ncbi-tools++/serial/impl/variant.hpp +include/ncbi-tools++/serial/impl/variant.inl +include/ncbi-tools++/serial/iterator.hpp +include/ncbi-tools++/serial/objcopy.hpp +include/ncbi-tools++/serial/objectinfo.hpp +include/ncbi-tools++/serial/objectio.hpp +include/ncbi-tools++/serial/objectiter.hpp +include/ncbi-tools++/serial/objhook.hpp +include/ncbi-tools++/serial/objistr.hpp +include/ncbi-tools++/serial/objistrasn.hpp +include/ncbi-tools++/serial/objistrasnb.hpp +include/ncbi-tools++/serial/objistrjson.hpp +include/ncbi-tools++/serial/objistrxml.hpp +include/ncbi-tools++/serial/objostr.hpp +include/ncbi-tools++/serial/objostrasn.hpp +include/ncbi-tools++/serial/objostrasnb.hpp +include/ncbi-tools++/serial/objostrjson.hpp +include/ncbi-tools++/serial/objostrxml.hpp +include/ncbi-tools++/serial/pack_string.hpp +include/ncbi-tools++/serial/rpcbase.hpp +include/ncbi-tools++/serial/rpcbase_impl.hpp +include/ncbi-tools++/serial/serial.hpp +include/ncbi-tools++/serial/serialasn.hpp +include/ncbi-tools++/serial/serialbase.hpp +include/ncbi-tools++/serial/serialdef.hpp +include/ncbi-tools++/serial/serialimpl.hpp +include/ncbi-tools++/serial/serializable.hpp +include/ncbi-tools++/serial/serialutil.hpp +include/ncbi-tools++/serial/streamiter.hpp +include/ncbi-tools++/serial/typeinfo.hpp +include/ncbi-tools++/util/align_range.hpp +include/ncbi-tools++/util/align_range_coll.hpp +include/ncbi-tools++/util/align_range_oper.hpp +include/ncbi-tools++/util/arg_regexp.hpp +include/ncbi-tools++/util/ascii85.hpp +include/ncbi-tools++/util/bitset/bitset_debug.hpp +include/ncbi-tools++/util/bitset/bitset_pool.hpp +include/ncbi-tools++/util/bitset/bm.h +include/ncbi-tools++/util/bitset/bmalgo.h +include/ncbi-tools++/util/bitset/bmalgo_impl.h +include/ncbi-tools++/util/bitset/bmalloc.h +include/ncbi-tools++/util/bitset/bmblocks.h +include/ncbi-tools++/util/bitset/bmconst.h +include/ncbi-tools++/util/bitset/bmdbg.h +include/ncbi-tools++/util/bitset/bmdef.h +include/ncbi-tools++/util/bitset/bmfunc.h +include/ncbi-tools++/util/bitset/bmfwd.h +include/ncbi-tools++/util/bitset/bmgamma.h +include/ncbi-tools++/util/bitset/bmrandom.h +include/ncbi-tools++/util/bitset/bmserial.h +include/ncbi-tools++/util/bitset/bmsparsevec.h +include/ncbi-tools++/util/bitset/bmsparsevec_algo.h +include/ncbi-tools++/util/bitset/bmsparsevec_serial.h +include/ncbi-tools++/util/bitset/bmsse2.h +include/ncbi-tools++/util/bitset/bmsse4.h +include/ncbi-tools++/util/bitset/bmsse_util.h +include/ncbi-tools++/util/bitset/bmtrans.h +include/ncbi-tools++/util/bitset/bmundef.h +include/ncbi-tools++/util/bitset/bmutil.h +include/ncbi-tools++/util/bitset/bmvmin.h +include/ncbi-tools++/util/bitset/encoding.h +include/ncbi-tools++/util/bitset/license.txt +include/ncbi-tools++/util/bitset/ncbi_bitset.hpp +include/ncbi-tools++/util/bitset/ncbi_bitset_alloc.hpp +include/ncbi-tools++/util/bitset/ncbi_bitset_util.hpp +include/ncbi-tools++/util/bitset/readme +include/ncbi-tools++/util/buffer_writer.hpp +include/ncbi-tools++/util/bytesrc.hpp +include/ncbi-tools++/util/cache/cache_ref.hpp +include/ncbi-tools++/util/cache/icache.hpp +include/ncbi-tools++/util/cache/icache_cf.hpp +include/ncbi-tools++/util/cache/icache_clean_thread.hpp +include/ncbi-tools++/util/checksum.hpp +include/ncbi-tools++/util/compress/archive.hpp +include/ncbi-tools++/util/compress/archive_.hpp +include/ncbi-tools++/util/compress/bzip2.hpp +include/ncbi-tools++/util/compress/bzip2/bzlib.h +include/ncbi-tools++/util/compress/compress.hpp +include/ncbi-tools++/util/compress/lzo.hpp +include/ncbi-tools++/util/compress/reader_zlib.hpp +include/ncbi-tools++/util/compress/stream.hpp +include/ncbi-tools++/util/compress/stream_util.hpp +include/ncbi-tools++/util/compress/tar.hpp +include/ncbi-tools++/util/compress/zlib.hpp +include/ncbi-tools++/util/compress/zlib/zconf.h +include/ncbi-tools++/util/compress/zlib/zlib.h +include/ncbi-tools++/util/compress/zlib/zutil.h +include/ncbi-tools++/util/creaders/alnread.h +include/ncbi-tools++/util/creaders/creaders_export.h +include/ncbi-tools++/util/ddump_viewer.hpp +include/ncbi-tools++/util/dictionary.hpp +include/ncbi-tools++/util/dictionary_util.hpp +include/ncbi-tools++/util/distribution.hpp +include/ncbi-tools++/util/error_codes.hpp +include/ncbi-tools++/util/file_manifest.hpp +include/ncbi-tools++/util/file_obsolete.hpp +include/ncbi-tools++/util/floating_point.hpp +include/ncbi-tools++/util/format_guess.hpp +include/ncbi-tools++/util/histogram_binning.hpp +include/ncbi-tools++/util/icanceled.hpp +include/ncbi-tools++/util/id_mux.hpp +include/ncbi-tools++/util/impl/floating_point_comparison.hpp +include/ncbi-tools++/util/itransaction.hpp +include/ncbi-tools++/util/itree.hpp +include/ncbi-tools++/util/itree.inl +include/ncbi-tools++/util/lightstr.hpp +include/ncbi-tools++/util/limited_size_map.hpp +include/ncbi-tools++/util/line_reader.hpp +include/ncbi-tools++/util/linkedset.hpp +include/ncbi-tools++/util/lock_vector.hpp +include/ncbi-tools++/util/logrotate.hpp +include/ncbi-tools++/util/mask_regexp.hpp +include/ncbi-tools++/util/math/matrix.hpp +include/ncbi-tools++/util/math/miscmath.h +include/ncbi-tools++/util/math/promote.hpp +include/ncbi-tools++/util/md5.hpp +include/ncbi-tools++/util/miscmath.h +include/ncbi-tools++/util/multi_writer.hpp +include/ncbi-tools++/util/mutex_pool.hpp +include/ncbi-tools++/util/ncbi_cache.hpp +include/ncbi-tools++/util/ncbi_table.hpp +include/ncbi-tools++/util/ncbi_url.hpp +include/ncbi-tools++/util/random_gen.hpp +include/ncbi-tools++/util/range.hpp +include/ncbi-tools++/util/range_coll.hpp +include/ncbi-tools++/util/rangelist.hpp +include/ncbi-tools++/util/rangemap.hpp +include/ncbi-tools++/util/rangemap.inl +include/ncbi-tools++/util/reader_writer.hpp +include/ncbi-tools++/util/regexp.hpp +include/ncbi-tools++/util/regexp/pcre.h +include/ncbi-tools++/util/regexp/pcrecpp.h +include/ncbi-tools++/util/regexp/pcrecpparg.h +include/ncbi-tools++/util/regexp/pcreposix.h +include/ncbi-tools++/util/request_control.hpp +include/ncbi-tools++/util/resize_iter.hpp +include/ncbi-tools++/util/resource_pool.hpp +include/ncbi-tools++/util/retry_ctx.hpp +include/ncbi-tools++/util/row_reader.hpp +include/ncbi-tools++/util/row_reader.inl +include/ncbi-tools++/util/row_reader_base.hpp +include/ncbi-tools++/util/row_reader_char_delimited.hpp +include/ncbi-tools++/util/row_reader_excel_csv.hpp +include/ncbi-tools++/util/row_reader_iana_csv.hpp +include/ncbi-tools++/util/row_reader_iana_tsv.hpp +include/ncbi-tools++/util/row_reader_ncbi_tsv.hpp +include/ncbi-tools++/util/scheduler.hpp +include/ncbi-tools++/util/sequtil/sequtil.hpp +include/ncbi-tools++/util/sequtil/sequtil_convert.hpp +include/ncbi-tools++/util/sequtil/sequtil_expt.hpp +include/ncbi-tools++/util/sequtil/sequtil_manip.hpp +include/ncbi-tools++/util/sgml_entity.hpp +include/ncbi-tools++/util/simple_buffer.hpp +include/ncbi-tools++/util/smalldns.hpp +include/ncbi-tools++/util/static_map.hpp +include/ncbi-tools++/util/static_set.hpp +include/ncbi-tools++/util/strbuffer.hpp +include/ncbi-tools++/util/strbuffer.inl +include/ncbi-tools++/util/stream_source.hpp +include/ncbi-tools++/util/strsearch.hpp +include/ncbi-tools++/util/sync_queue.hpp +include/ncbi-tools++/util/table_printer.hpp +include/ncbi-tools++/util/tables/raw_scoremat.h +include/ncbi-tools++/util/tables/tables_export.h +include/ncbi-tools++/util/text_joiner.hpp +include/ncbi-tools++/util/thread_nonstop.hpp +include/ncbi-tools++/util/thread_pool.hpp +include/ncbi-tools++/util/thread_pool_ctrl.hpp +include/ncbi-tools++/util/thread_pool_old.hpp +include/ncbi-tools++/util/time_line.hpp +include/ncbi-tools++/util/timsort.hpp +include/ncbi-tools++/util/transmissionrw.hpp +include/ncbi-tools++/util/unicode.hpp +include/ncbi-tools++/util/utf8.hpp +include/ncbi-tools++/util/util_exception.hpp +include/ncbi-tools++/util/util_misc.hpp +include/ncbi-tools++/util/uttp.hpp +include/ncbi-tools++/util/value_convert.hpp +include/ncbi-tools++/util/value_convert_policy.hpp +include/ncbi-tools++/util/weakmap.hpp +include/ncbi-tools++/util/weakmap.inl +include/ncbi-tools++/util/xregexp/arg_regexp.hpp +include/ncbi-tools++/util/xregexp/mask_regexp.hpp +include/ncbi-tools++/util/xregexp/regexp.hpp +include/ncbi-tools++/util/xregexp/regexp_template_tester.hpp +lib/ncbi-tools++/libaccess-static.a +lib/ncbi-tools++/libaccess.a +lib/ncbi-tools++/libalign_format-static.a +lib/ncbi-tools++/libalign_format.a +lib/ncbi-tools++/libbiblio-static.a +lib/ncbi-tools++/libbiblio.a +lib/ncbi-tools++/libbiotree-static.a +lib/ncbi-tools++/libbiotree.a +lib/ncbi-tools++/libblast-static.a +lib/ncbi-tools++/libblast.a +lib/ncbi-tools++/libblast_app_util-static.a +lib/ncbi-tools++/libblast_app_util.a +lib/ncbi-tools++/libblast_services-static.a +lib/ncbi-tools++/libblast_services.a +lib/ncbi-tools++/libblastdb-static.a +lib/ncbi-tools++/libblastdb.a +lib/ncbi-tools++/libblastdb_format-static.a +lib/ncbi-tools++/libblastdb_format.a +lib/ncbi-tools++/libblastinput-static.a +lib/ncbi-tools++/libblastinput.a +lib/ncbi-tools++/libblastxml-static.a +lib/ncbi-tools++/libblastxml.a +lib/ncbi-tools++/libblastxml2-static.a +lib/ncbi-tools++/libblastxml2.a +lib/ncbi-tools++/libcdd-static.a +lib/ncbi-tools++/libcdd.a +lib/ncbi-tools++/libcn3d-static.a +lib/ncbi-tools++/libcn3d.a +lib/ncbi-tools++/libcomposition_adjustment-static.a +lib/ncbi-tools++/libcomposition_adjustment.a +lib/ncbi-tools++/libconnect-static.a +lib/ncbi-tools++/libconnect.a +lib/ncbi-tools++/libconnssl-static.a +lib/ncbi-tools++/libconnssl.a +lib/ncbi-tools++/libcreaders-static.a +lib/ncbi-tools++/libcreaders.a +lib/ncbi-tools++/libdbapi-static.a +lib/ncbi-tools++/libdbapi.a +lib/ncbi-tools++/libdbapi_driver-dll.so +lib/ncbi-tools++/libdbapi_driver-static.a +lib/ncbi-tools++/libdbapi_driver.a +lib/ncbi-tools++/libdocsum-static.a +lib/ncbi-tools++/libdocsum.a +lib/ncbi-tools++/libentrez2-static.a +lib/ncbi-tools++/libentrez2.a +lib/ncbi-tools++/libentrez2cli-static.a +lib/ncbi-tools++/libentrez2cli.a +lib/ncbi-tools++/libentrezgene-static.a +lib/ncbi-tools++/libentrezgene.a +lib/ncbi-tools++/libfeatdef-static.a +lib/ncbi-tools++/libfeatdef.a +lib/ncbi-tools++/libgbproj-static.a +lib/ncbi-tools++/libgbproj.a +lib/ncbi-tools++/libgbseq-static.a +lib/ncbi-tools++/libgbseq.a +lib/ncbi-tools++/libgencoll_client-static.a +lib/ncbi-tools++/libgencoll_client.a +lib/ncbi-tools++/libgene_info-static.a +lib/ncbi-tools++/libgene_info.a +lib/ncbi-tools++/libgeneral-static.a +lib/ncbi-tools++/libgeneral.a +lib/ncbi-tools++/libgenesbyloc-static.a +lib/ncbi-tools++/libgenesbyloc.a +lib/ncbi-tools++/libgenome_collection-static.a +lib/ncbi-tools++/libgenome_collection.a +lib/ncbi-tools++/libhomologene-static.a +lib/ncbi-tools++/libhomologene.a +lib/ncbi-tools++/libid1-static.a +lib/ncbi-tools++/libid1.a +lib/ncbi-tools++/libid1cli-static.a +lib/ncbi-tools++/libid1cli.a +lib/ncbi-tools++/libid2-static.a +lib/ncbi-tools++/libid2.a +lib/ncbi-tools++/libid2_split-static.a +lib/ncbi-tools++/libid2_split.a +lib/ncbi-tools++/libid2cli-static.a +lib/ncbi-tools++/libid2cli.a +lib/ncbi-tools++/libigblast-static.a +lib/ncbi-tools++/libigblast.a +lib/ncbi-tools++/libinsdseq-static.a +lib/ncbi-tools++/libinsdseq.a +lib/ncbi-tools++/libmacro-static.a +lib/ncbi-tools++/libmacro.a +lib/ncbi-tools++/libmedlars-static.a +lib/ncbi-tools++/libmedlars.a +lib/ncbi-tools++/libmedline-static.a +lib/ncbi-tools++/libmedline.a +lib/ncbi-tools++/libmim-static.a +lib/ncbi-tools++/libmim.a +lib/ncbi-tools++/libmla-static.a +lib/ncbi-tools++/libmla.a +lib/ncbi-tools++/libmlacli-static.a +lib/ncbi-tools++/libmlacli.a +lib/ncbi-tools++/libmmdb-static.a +lib/ncbi-tools++/libmmdb.a +lib/ncbi-tools++/libncbi_xblobstorage_netcache-static.a +lib/ncbi-tools++/libncbi_xblobstorage_netcache.a +lib/ncbi-tools++/libncbi_xcache_dbapi-dll.so +lib/ncbi-tools++/libncbi_xcache_dbapi-static.a +lib/ncbi-tools++/libncbi_xcache_dbapi.a +lib/ncbi-tools++/libncbi_xcache_netcache-dll.so +lib/ncbi-tools++/libncbi_xcache_netcache-static.a +lib/ncbi-tools++/libncbi_xcache_netcache.a +lib/ncbi-tools++/libncbi_xloader_blastdb-static.a +lib/ncbi-tools++/libncbi_xloader_blastdb.a +lib/ncbi-tools++/libncbi_xloader_blastdb_rmt-static.a +lib/ncbi-tools++/libncbi_xloader_blastdb_rmt.a +lib/ncbi-tools++/libncbi_xloader_genbank-dll.so +lib/ncbi-tools++/libncbi_xloader_genbank-static.a +lib/ncbi-tools++/libncbi_xloader_genbank.a +lib/ncbi-tools++/libncbi_xreader-dll.so +lib/ncbi-tools++/libncbi_xreader-static.a +lib/ncbi-tools++/libncbi_xreader.a +lib/ncbi-tools++/libncbi_xreader_cache-dll.so +lib/ncbi-tools++/libncbi_xreader_cache-static.a +lib/ncbi-tools++/libncbi_xreader_cache.a +lib/ncbi-tools++/libncbi_xreader_gicache-dll.so +lib/ncbi-tools++/libncbi_xreader_gicache-static.a +lib/ncbi-tools++/libncbi_xreader_gicache.a +lib/ncbi-tools++/libncbi_xreader_id1-dll.so +lib/ncbi-tools++/libncbi_xreader_id1-static.a +lib/ncbi-tools++/libncbi_xreader_id1.a +lib/ncbi-tools++/libncbi_xreader_id2-dll.so +lib/ncbi-tools++/libncbi_xreader_id2-static.a +lib/ncbi-tools++/libncbi_xreader_id2.a +lib/ncbi-tools++/libncbimime-static.a +lib/ncbi-tools++/libncbimime.a +lib/ncbi-tools++/libobjcoords-static.a +lib/ncbi-tools++/libobjcoords.a +lib/ncbi-tools++/libobjprt-static.a +lib/ncbi-tools++/libobjprt.a +lib/ncbi-tools++/libomssa-static.a +lib/ncbi-tools++/libomssa.a +lib/ncbi-tools++/libpcassay-static.a +lib/ncbi-tools++/libpcassay.a +lib/ncbi-tools++/libpcsubstance-static.a +lib/ncbi-tools++/libpcsubstance.a +lib/ncbi-tools++/libproj-static.a +lib/ncbi-tools++/libproj.a +lib/ncbi-tools++/libproteinkmer-static.a +lib/ncbi-tools++/libproteinkmer.a +lib/ncbi-tools++/libpub-static.a +lib/ncbi-tools++/libpub.a +lib/ncbi-tools++/libpubmed-static.a +lib/ncbi-tools++/libpubmed.a +lib/ncbi-tools++/libremap-static.a +lib/ncbi-tools++/libremap.a +lib/ncbi-tools++/libremapcli-static.a +lib/ncbi-tools++/libremapcli.a +lib/ncbi-tools++/libscoremat-static.a +lib/ncbi-tools++/libscoremat.a +lib/ncbi-tools++/libseq-static.a +lib/ncbi-tools++/libseq.a +lib/ncbi-tools++/libseqcode-static.a +lib/ncbi-tools++/libseqcode.a +lib/ncbi-tools++/libseqdb-static.a +lib/ncbi-tools++/libseqdb.a +lib/ncbi-tools++/libseqedit-static.a +lib/ncbi-tools++/libseqedit.a +lib/ncbi-tools++/libseqmasks_io-static.a +lib/ncbi-tools++/libseqmasks_io.a +lib/ncbi-tools++/libseqset-static.a +lib/ncbi-tools++/libseqset.a +lib/ncbi-tools++/libseqsplit-static.a +lib/ncbi-tools++/libseqsplit.a +lib/ncbi-tools++/libseqtest-static.a +lib/ncbi-tools++/libseqtest.a +lib/ncbi-tools++/libsequtil-static.a +lib/ncbi-tools++/libsequtil.a +lib/ncbi-tools++/libsqlitewrapp-static.a +lib/ncbi-tools++/libsqlitewrapp.a +lib/ncbi-tools++/libsubmit-static.a +lib/ncbi-tools++/libsubmit.a +lib/ncbi-tools++/libtables-static.a +lib/ncbi-tools++/libtables.a +lib/ncbi-tools++/libtaxon1-static.a +lib/ncbi-tools++/libtaxon1.a +lib/ncbi-tools++/libtaxon3-static.a +lib/ncbi-tools++/libtaxon3.a +lib/ncbi-tools++/libtest_mt-static.a +lib/ncbi-tools++/libtest_mt.a +lib/ncbi-tools++/libtinyseq-static.a +lib/ncbi-tools++/libtinyseq.a +lib/ncbi-tools++/libtrackmgr-static.a +lib/ncbi-tools++/libtrackmgr.a +lib/ncbi-tools++/libtrackmgrcli-static.a +lib/ncbi-tools++/libtrackmgrcli.a +lib/ncbi-tools++/libtrackmgrgridcli-static.a +lib/ncbi-tools++/libtrackmgrgridcli.a +lib/ncbi-tools++/libvalerr-static.a +lib/ncbi-tools++/libvalerr.a +lib/ncbi-tools++/libvalid-static.a +lib/ncbi-tools++/libvalid.a +lib/ncbi-tools++/libvariation-static.a +lib/ncbi-tools++/libvariation.a +lib/ncbi-tools++/libvarrep-static.a +lib/ncbi-tools++/libvarrep.a +lib/ncbi-tools++/libwritedb-static.a +lib/ncbi-tools++/libwritedb.a +lib/ncbi-tools++/libxalgoblastdbindex-static.a +lib/ncbi-tools++/libxalgoblastdbindex.a +lib/ncbi-tools++/libxalgodustmask-static.a +lib/ncbi-tools++/libxalgodustmask.a +lib/ncbi-tools++/libxalgosegmask-static.a +lib/ncbi-tools++/libxalgosegmask.a +lib/ncbi-tools++/libxalgowinmask-static.a +lib/ncbi-tools++/libxalgowinmask.a +lib/ncbi-tools++/libxalnmgr-static.a +lib/ncbi-tools++/libxalnmgr.a +lib/ncbi-tools++/libxblast-static.a +lib/ncbi-tools++/libxblast.a +lib/ncbi-tools++/libxblastformat-static.a +lib/ncbi-tools++/libxblastformat.a +lib/ncbi-tools++/libxcgi-static.a +lib/ncbi-tools++/libxcgi.a +lib/ncbi-tools++/libxcleanup-static.a +lib/ncbi-tools++/libxcleanup.a +lib/ncbi-tools++/libxcompress-static.a +lib/ncbi-tools++/libxcompress.a +lib/ncbi-tools++/libxconnect-static.a +lib/ncbi-tools++/libxconnect.a +lib/ncbi-tools++/libxconnserv-static.a +lib/ncbi-tools++/libxconnserv.a +lib/ncbi-tools++/libxcser-static.a +lib/ncbi-tools++/libxcser.a +lib/ncbi-tools++/libxfcgi-static.a +lib/ncbi-tools++/libxfcgi.a +lib/ncbi-tools++/libxformat-static.a +lib/ncbi-tools++/libxformat.a +lib/ncbi-tools++/libxhtml-static.a +lib/ncbi-tools++/libxhtml.a +lib/ncbi-tools++/libxncbi-static.a +lib/ncbi-tools++/libxncbi.a +lib/ncbi-tools++/libxnetblast-static.a +lib/ncbi-tools++/libxnetblast.a +lib/ncbi-tools++/libxnetblastcli-static.a +lib/ncbi-tools++/libxnetblastcli.a +lib/ncbi-tools++/libxobjedit-static.a +lib/ncbi-tools++/libxobjedit.a +lib/ncbi-tools++/libxobjmgr-static.a +lib/ncbi-tools++/libxobjmgr.a +lib/ncbi-tools++/libxobjread-static.a +lib/ncbi-tools++/libxobjread.a +lib/ncbi-tools++/libxobjreadex-static.a +lib/ncbi-tools++/libxobjreadex.a +lib/ncbi-tools++/libxobjsimple-static.a +lib/ncbi-tools++/libxobjsimple.a +lib/ncbi-tools++/libxobjutil-static.a +lib/ncbi-tools++/libxobjutil.a +lib/ncbi-tools++/libxregexp-static.a +lib/ncbi-tools++/libxregexp.a +lib/ncbi-tools++/libxregexp_template_tester-static.a +lib/ncbi-tools++/libxregexp_template_tester.a +lib/ncbi-tools++/libxser-static.a +lib/ncbi-tools++/libxser.a +lib/ncbi-tools++/libxthrserv-static.a +lib/ncbi-tools++/libxthrserv.a +lib/ncbi-tools++/libxutil-static.a +lib/ncbi-tools++/libxutil.a +lib/ncbi-tools++/libxxconnect-static.a +lib/ncbi-tools++/libxxconnect.a diff --git a/biology/ncbi-blast+/buildlink3.mk b/biology/ncbi-blast+/buildlink3.mk new file mode 100644 index 00000000000..087549c4711 --- /dev/null +++ b/biology/ncbi-blast+/buildlink3.mk @@ -0,0 +1,13 @@ +# $NetBSD: buildlink3.mk,v 1.1 2018/04/27 20:28:28 bacon Exp $ + +BUILDLINK_TREE+= ncbi-blast+ + +.if !defined(NCBI_BLAST+_BUILDLINK3_MK) +NCBI_BLAST+_BUILDLINK3_MK:= + +BUILDLINK_API_DEPENDS.ncbi-blast++= ncbi-blast+>=2.7.1 +BUILDLINK_PKGSRCDIR.ncbi-blast+?= ../../wip/ncbi-blast+ + +.endif # NCBI_BLAST+_BUILDLINK3_MK + +BUILDLINK_TREE+= -ncbi-blast+ diff --git a/biology/ncbi-blast+/distinfo b/biology/ncbi-blast+/distinfo new file mode 100644 index 00000000000..a2df99c4125 --- /dev/null +++ b/biology/ncbi-blast+/distinfo @@ -0,0 +1,12 @@ +$NetBSD: distinfo,v 1.1 2018/04/27 20:28:28 bacon Exp $ + +SHA1 (ncbi-blast-2.7.1+-src.tar.gz) = d04a25f01c386abd8515957a2ce1dabf376743f8 +RMD160 (ncbi-blast-2.7.1+-src.tar.gz) = 7277419e16fb215aae4136a16e13bec963b70cbd +SHA512 (ncbi-blast-2.7.1+-src.tar.gz) = e4b3914f51165ae4c82051068ed9d3470687a4e0f1df6274018c0ba14b241666a570d72265c7d167b8ce2a9075652744244a00e3e95c00c4252da0fbd80d17c6 +Size (ncbi-blast-2.7.1+-src.tar.gz) = 23254824 bytes +SHA1 (patch-compilers_xcode30__prj_configure) = b89b3be8671c6c692ba474476879ee67a76fdbe5 +SHA1 (patch-src_algo_blast_core_blast__kappa.c) = a580a5fb2d5a3af04c27dd63a7edd349b7ae1be7 +SHA1 (patch-src_build-system_Makefile.in.top) = 71d5246867a8c985c1175c338fb0af664094ca01 +SHA1 (patch-src_build-system_cmake_cmake-configure) = 7b9a10447b1dd665200ee73a2180b3210f586b97 +SHA1 (patch-src_build-system_configure) = 90becd948f8aca87fd68081e689bdc8c49b419c6 +SHA1 (patch-src_build-system_helpers_Makefile.run__with__lock.app) = 0fb99ac4e582938fd47e66c146da71695f009b98 diff --git a/biology/ncbi-blast+/patches/patch-compilers_xcode30__prj_configure b/biology/ncbi-blast+/patches/patch-compilers_xcode30__prj_configure new file mode 100644 index 00000000000..7cc26bd7450 --- /dev/null +++ b/biology/ncbi-blast+/patches/patch-compilers_xcode30__prj_configure @@ -0,0 +1,15 @@ +$NetBSD: patch-compilers_xcode30__prj_configure,v 1.1 2018/04/27 20:28:28 bacon Exp $ + +# Nonportable extension + +--- compilers/xcode30_prj/configure.orig 2018-04-27 14:19:43.000000000 +0000 ++++ compilers/xcode30_prj/configure +@@ -280,7 +280,7 @@ arch=`arch` + platform=`xcodebuild -version 2>/dev/null | grep 'Xcode [0-9][0-9]*' | sed -e 's/[ .]//g'` + + # ------- target architecture +-if test "$use_64" == "yes"; then ++if test "$use_64" = "yes"; then + use_arch="x86_64" + else + use_arch="i386" diff --git a/biology/ncbi-blast+/patches/patch-src_algo_blast_core_blast__kappa.c b/biology/ncbi-blast+/patches/patch-src_algo_blast_core_blast__kappa.c new file mode 100644 index 00000000000..328c1f2a826 --- /dev/null +++ b/biology/ncbi-blast+/patches/patch-src_algo_blast_core_blast__kappa.c @@ -0,0 +1,31 @@ +$NetBSD: patch-src_algo_blast_core_blast__kappa.c,v 1.1 2018/04/27 20:28:28 bacon Exp $ + +# Work around NetBSD stderr def choking macro + +--- src/algo/blast/core/blast_kappa.c.orig 2018-03-26 21:55:44.000000000 +0000 ++++ src/algo/blast/core/blast_kappa.c +@@ -32,6 +32,7 @@ + * system for each match in blastpgp + */ + ++#include <stdio.h> + #include <float.h> + #include <algo/blast/core/ncbi_math.h> + #include <algo/blast/core/blast_hits.h> +@@ -3404,13 +3405,15 @@ Blast_RedoAlignmentCore_MT(EBlastProgram + } + + Boolean interrupt = FALSE; ++ /* NetBSD defines stderr as (&__sF[2]), which the macro below chokes on */ ++ FILE *my_stderr = stderr; + #pragma omp parallel \ + default(none) num_threads(actual_num_threads) \ + if(actual_num_threads>1) \ + shared(interrupt, seqsrc_tld, score_params_tld, hit_params_tld, \ + gap_align_tld, results_tld, \ + redoneMatches_tld, \ +- stderr, \ ++ my_stderr, \ + numQueries, numMatches, theseMatches, \ + numFrames, program_number, subjectBlk_tld, positionBased, \ + default_db_genetic_code, localScalingFactor, queryInfo, \ diff --git a/biology/ncbi-blast+/patches/patch-src_build-system_Makefile.in.top b/biology/ncbi-blast+/patches/patch-src_build-system_Makefile.in.top new file mode 100644 index 00000000000..b45adbd2d56 --- /dev/null +++ b/biology/ncbi-blast+/patches/patch-src_build-system_Makefile.in.top @@ -0,0 +1,41 @@ +$NetBSD: patch-src_build-system_Makefile.in.top,v 1.1 2018/04/27 20:28:28 bacon Exp $ + +# Add destdir suppot and fix perms on installed files + +--- src/build-system/Makefile.in.top.orig 2017-02-01 16:52:02.000000000 +0000 ++++ src/build-system/Makefile.in.top +@@ -37,22 +37,26 @@ check: $(PROJECTS) + fi + + install-toolkit: +- -$(RMDIR) $(pincludedir) +- $(INSTALL) -d $(bindir) $(libdir) $(pincludedir) +- $(INSTALL) $(lbindir)/* $(bindir) +- $(INSTALL) -m 644 $(llibdir)/*.* $(libdir) ++ -$(RMDIR) $(DESTDIR)$(pincludedir) ++ $(INSTALL) -d $(DESTDIR)$(bindir) $(DESTDIR)$(libdir) $(DESTDIR)$(pincludedir) ++ $(INSTALL) -m 755 $(lbindir)/* $(DESTDIR)$(bindir) ++ $(INSTALL) -m 644 $(llibdir)/*.* $(DESTDIR)$(libdir) + if test -d $(llibdir)/ncbi; then \ +- cp -pPR $(llibdir)/ncbi $(libdir)/; \ ++ cp -pPR $(llibdir)/ncbi $(DESTDIR)$(libdir)/; \ + fi +- -rm -f $(libdir)/lib*-static.a +- cd $(libdir) && \ ++ -rm -f $(DESTDIR)$(libdir)/lib*-static.a ++ cd $(DESTDIR)$(libdir) && \ + for x in *.a; do \ + $(LN_S) "$$x" "`$(BASENAME) \"$$x\" .a`-static.a"; \ + done ++ find $(DESTDIR)$(libdir) -name '*.a' -exec chmod 644 '{}' \; ++ find $(DESTDIR)$(libdir) -name '*.so*' -exec chmod 755 '{}' \; + for d in $(includedir0) $(incdir); do \ + cd $$d && find * -name .svn -prune -o -print | \ +- cpio -pd $(pincludedir) ; \ ++ cpio -pd $(DESTDIR)$(pincludedir) ; \ + done ++ find $(DESTDIR)$(pincludedir) -type f -exec chmod 644 '{}' \; ++ find $(DESTDIR)$(pincludedir) -type d -exec chmod 755 '{}' \; + ## set up appropriate build and status directories somewhere under $(libdir)? + + install-gbench: diff --git a/biology/ncbi-blast+/patches/patch-src_build-system_cmake_cmake-configure b/biology/ncbi-blast+/patches/patch-src_build-system_cmake_cmake-configure new file mode 100644 index 00000000000..afa61932c70 --- /dev/null +++ b/biology/ncbi-blast+/patches/patch-src_build-system_cmake_cmake-configure @@ -0,0 +1,15 @@ +$NetBSD: patch-src_build-system_cmake_cmake-configure,v 1.1 2018/04/27 20:28:28 bacon Exp $ + +# Fix portability issue + +--- src/build-system/cmake/cmake-configure.orig 2018-03-26 14:13:44.229849356 +0000 ++++ src/build-system/cmake/cmake-configure +@@ -468,7 +468,7 @@ fi + if [ -z "$ROOT" ]; then + if [ -z "$GPIPEROOT" ]; then + ROOT="CMake-$BUILD_TYPE" +- if [ "$BUILD_SHARED_LIBS" == "ON" ]; then ++ if [ "$BUILD_SHARED_LIBS" = "ON" ]; then + ROOT="$ROOT"DLL + fi + else diff --git a/biology/ncbi-blast+/patches/patch-src_build-system_configure b/biology/ncbi-blast+/patches/patch-src_build-system_configure new file mode 100644 index 00000000000..466f7b69c59 --- /dev/null +++ b/biology/ncbi-blast+/patches/patch-src_build-system_configure @@ -0,0 +1,15 @@ +$NetBSD: patch-src_build-system_configure,v 1.1 2018/04/27 20:28:28 bacon Exp $ + +# Fix support for localstatedir + +--- src/build-system/configure.orig 2018-02-19 01:32:40 UTC ++++ src/build-system/configure +@@ -1755,7 +1755,7 @@ for x_arg in "$@" ; do + | --libdir=* | --includedir=* | --build=* | --host=* | --target=* \ + | --mandir=* | --infodir=* | --docdir=* | --htmldir=* \ + | --datadir=* | --sysconfdir=* | --localstatedir=* \ +- | --with-runpath=* | --with-relative-runpath=* \ ++ | --with-runpath=* | --with-relative-runpath=* | --localstatedir=* \ + | --with-experimental=* | --with-extra-action=* | --with-build-root=* \ + | --with-fake-root=* | --with-build-root-sfx=* | --with-check=* \ + | --with-check-tools=* | --with-ftds=[0-9]* | --with-fastcgi=[0-9]* \ diff --git a/biology/ncbi-blast+/patches/patch-src_build-system_helpers_Makefile.run__with__lock.app b/biology/ncbi-blast+/patches/patch-src_build-system_helpers_Makefile.run__with__lock.app new file mode 100644 index 00000000000..55539d225a0 --- /dev/null +++ b/biology/ncbi-blast+/patches/patch-src_build-system_helpers_Makefile.run__with__lock.app @@ -0,0 +1,20 @@ +$NetBSD: patch-src_build-system_helpers_Makefile.run__with__lock.app,v 1.1 2018/04/27 20:28:28 bacon Exp $ + +# Missing RELRO for this one binary +# https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=820959 + +--- src/build-system/helpers/Makefile.run_with_lock.app.orig 2018-04-27 16:21:07.000000000 +0000 ++++ src/build-system/helpers/Makefile.run_with_lock.app +@@ -6,9 +6,9 @@ CC = $(CC_FOR_BUILD) + CC_WRAPPER = + CXX_WRAPPER = + CPP = $(CPP_FOR_BUILD) +-CFLAGS = $(CFLAGS_FOR_BUILD) +-CPPFLAGS = $(CPPFLAGS_FOR_BUILD) +-LDFLAGS = $(LDFLAGS_FOR_BUILD) ++CFLAGS = $(CFLAGS_FOR_BUILD) -Wl,-z,relro,-z,now ++CPPFLAGS = $(CPPFLAGS_FOR_BUILD) -Wl,-z,relro,-z,now ++LDFLAGS = $(LDFLAGS_FOR_BUILD) -Wl,-z,relro,-z,now + LIBS = $(C_LIBS) + LINK = $(CC) + LINK_WRAPPER = |