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authorjoerg <joerg@pkgsrc.org>2013-04-29 21:31:09 +0000
committerjoerg <joerg@pkgsrc.org>2013-04-29 21:31:09 +0000
commit6e046ee9d87a4b818e73943146107b522dc94508 (patch)
treeb710080e6271cb564fc3ba34cc7bac3fab429e6d /biology
parent0a5f84a912074adb51a614e31607e7ab495cc90a (diff)
downloadpkgsrc-6e046ee9d87a4b818e73943146107b522dc94508.tar.gz
Add a number of includes hidden by libstdc++'s name space pollution.
Diffstat (limited to 'biology')
-rw-r--r--biology/clustalw/distinfo3
-rw-r--r--biology/clustalw/patches/patch-src_general_VectorOutOfRange.h12
2 files changed, 14 insertions, 1 deletions
diff --git a/biology/clustalw/distinfo b/biology/clustalw/distinfo
index 23a17aaae23..71d5142ccb0 100644
--- a/biology/clustalw/distinfo
+++ b/biology/clustalw/distinfo
@@ -1,5 +1,6 @@
-$NetBSD: distinfo,v 1.6 2012/12/13 13:27:13 wen Exp $
+$NetBSD: distinfo,v 1.7 2013/04/29 21:31:09 joerg Exp $
SHA1 (clustalw-2.1.tar.gz) = f29784f68585544baa77cbeca6392e533d4cf433
RMD160 (clustalw-2.1.tar.gz) = e193769955a6270797fcb039ca398a4b59d9248d
Size (clustalw-2.1.tar.gz) = 350761 bytes
+SHA1 (patch-src_general_VectorOutOfRange.h) = 8c1d3df314efba8afa88410542e26881951e7193
diff --git a/biology/clustalw/patches/patch-src_general_VectorOutOfRange.h b/biology/clustalw/patches/patch-src_general_VectorOutOfRange.h
new file mode 100644
index 00000000000..f075b151a64
--- /dev/null
+++ b/biology/clustalw/patches/patch-src_general_VectorOutOfRange.h
@@ -0,0 +1,12 @@
+$NetBSD: patch-src_general_VectorOutOfRange.h,v 1.1 2013/04/29 21:31:10 joerg Exp $
+
+--- src/general/VectorOutOfRange.h.orig 2013-04-29 20:21:11.000000000 +0000
++++ src/general/VectorOutOfRange.h
+@@ -4,6 +4,7 @@
+ * Copyright (c) 2007 Des Higgins, Julie Thompson and Toby Gibson.
+ */
+ #include <stdexcept>
++#include <string>
+ #include <exception>
+ namespace clustalw
+ {