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authorrillig <rillig@pkgsrc.org>2020-01-18 23:30:05 +0000
committerrillig <rillig@pkgsrc.org>2020-01-18 23:30:05 +0000
commitb831c01fc9da1c5001588ec465faa98afe3bf1c8 (patch)
treebc9d7f24b9a4d046704f52f30922bbfce87279a2 /biology
parent5cc0fec1a826d6c92df3c3e772b38bd28114cab0 (diff)
downloadpkgsrc-b831c01fc9da1c5001588ec465faa98afe3bf1c8.tar.gz
all: migrate several HOMEPAGEs to https
pkglint --only "https instead of http" -r -F With manual adjustments afterwards since pkglint 19.4.4 fixed a few indentations in unrelated lines. This mainly affects projects hosted at SourceForce, as well as freedesktop.org, CTAN and GNU.
Diffstat (limited to 'biology')
-rw-r--r--biology/bcftools/Makefile4
-rw-r--r--biology/bwa/Makefile4
-rw-r--r--biology/gabedit/Makefile4
-rw-r--r--biology/gnome-chemistry-utils/Makefile4
-rw-r--r--biology/lucy/Makefile4
-rw-r--r--biology/mummer/Makefile4
-rw-r--r--biology/nut/Makefile4
-rw-r--r--biology/primer3/Makefile4
8 files changed, 16 insertions, 16 deletions
diff --git a/biology/bcftools/Makefile b/biology/bcftools/Makefile
index 5d794feea7a..8411131e77d 100644
--- a/biology/bcftools/Makefile
+++ b/biology/bcftools/Makefile
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.5 2019/11/02 22:09:00 rillig Exp $
+# $NetBSD: Makefile,v 1.6 2020/01/18 23:30:08 rillig Exp $
DISTNAME= bcftools-1.9
PKGREVISION= 2
@@ -8,7 +8,7 @@ EXTRACT_SUFX= .tar.bz2
GITHUB_RELEASE= ${PKGVERSION_NOREV}
MAINTAINER= bacon@NetBSD.org
-HOMEPAGE= http://samtools.github.io/bcftools/
+HOMEPAGE= https://samtools.github.io/bcftools/
COMMENT= Calling and manipulating files VCF and BCF formats
LICENSE= mit
diff --git a/biology/bwa/Makefile b/biology/bwa/Makefile
index 62c1b110825..7d9a8e43bdf 100644
--- a/biology/bwa/Makefile
+++ b/biology/bwa/Makefile
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.9 2019/11/02 22:09:00 rillig Exp $
+# $NetBSD: Makefile,v 1.10 2020/01/18 23:30:09 rillig Exp $
DISTNAME= bwa-0.7.17
CATEGORIES= biology
@@ -7,7 +7,7 @@ GITHUB_TAG= v${PKGVERSION_NOREV}
MASTER_SITES= ${MASTER_SITE_GITHUB:=lh3/}
MAINTAINER= bacon@NetBSD.org
-HOMEPAGE= http://bio-bwa.sourceforge.net/
+HOMEPAGE= https://bio-bwa.sourceforge.net/
COMMENT= Map low-divergent sequences against a large reference genome
LICENSE= gnu-gpl-v3
diff --git a/biology/gabedit/Makefile b/biology/gabedit/Makefile
index 83140c4d073..5175aa6c0d4 100644
--- a/biology/gabedit/Makefile
+++ b/biology/gabedit/Makefile
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.12 2019/07/21 22:24:29 wiz Exp $
+# $NetBSD: Makefile,v 1.13 2020/01/18 23:30:09 rillig Exp $
PKGNAME= gabedit-2.4.8
PKGREVISION= 8
@@ -7,7 +7,7 @@ CATEGORIES= biology
MASTER_SITES= ${MASTER_SITE_SOURCEFORGE:=gabedit/}
MAINTAINER= asau@inbox.ru
-HOMEPAGE= http://gabedit.sourceforge.net/
+HOMEPAGE= https://gabedit.sourceforge.net/
COMMENT= Graphical User Interface to computational chemistry packages
USE_TOOLS= gmake pkg-config
diff --git a/biology/gnome-chemistry-utils/Makefile b/biology/gnome-chemistry-utils/Makefile
index 565c6c2d592..da01aa42785 100644
--- a/biology/gnome-chemistry-utils/Makefile
+++ b/biology/gnome-chemistry-utils/Makefile
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.42 2019/11/20 18:57:57 kamil Exp $
+# $NetBSD: Makefile,v 1.43 2020/01/18 23:30:09 rillig Exp $
#
DISTNAME= gnome-chemistry-utils-0.12.13
@@ -8,7 +8,7 @@ MASTER_SITES= http://download-mirror.savannah.gnu.org/releases/gchemutils/0.12/
EXTRACT_SUFX= .tar.bz2
MAINTAINER= pkgsrc-users@NetBSD.org
-HOMEPAGE= http://gchemutils.nongnu.org/
+HOMEPAGE= https://gchemutils.nongnu.org/
COMMENT= GChemPaint, a 2D chemical editor and other programs
LICENSE= gnu-gpl-v2 AND gnu-fdl-v1.1
diff --git a/biology/lucy/Makefile b/biology/lucy/Makefile
index 6d739cc4ed9..075467d1570 100644
--- a/biology/lucy/Makefile
+++ b/biology/lucy/Makefile
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.9 2014/10/09 14:06:01 wiz Exp $
+# $NetBSD: Makefile,v 1.10 2020/01/18 23:30:09 rillig Exp $
#
DISTNAME= ${PKGNAME:S/-//}
@@ -7,7 +7,7 @@ CATEGORIES= biology
MASTER_SITES= ${MASTER_SITE_SOURCEFORGE:=lucy/}
MAINTAINER= dprice@cs.nmsu.edu
-HOMEPAGE= http://lucy.sourceforge.net/
+HOMEPAGE= https://lucy.sourceforge.net/
COMMENT= Sequence Cleanup Program
#LICENSE= LICENSE file say "artistic", but bit differ.
diff --git a/biology/mummer/Makefile b/biology/mummer/Makefile
index 79617a68c37..fb5a7760fa2 100644
--- a/biology/mummer/Makefile
+++ b/biology/mummer/Makefile
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.26 2019/08/11 13:18:00 wiz Exp $
+# $NetBSD: Makefile,v 1.27 2020/01/18 23:30:09 rillig Exp $
#
DISTNAME= MUMmer3.20
@@ -8,7 +8,7 @@ CATEGORIES= biology
MASTER_SITES= ${MASTER_SITE_SOURCEFORGE:=mummer/}
MAINTAINER= hdp@cs.nmsu.edu
-HOMEPAGE= http://mummer.sourceforge.net/
+HOMEPAGE= https://mummer.sourceforge.net/
COMMENT= System for aligning whole genome sequences
WRKSRC= ${WRKDIR}/${DISTNAME}
diff --git a/biology/nut/Makefile b/biology/nut/Makefile
index 4c55f4957e5..97363be318e 100644
--- a/biology/nut/Makefile
+++ b/biology/nut/Makefile
@@ -1,11 +1,11 @@
-# $NetBSD: Makefile,v 1.28 2012/09/11 20:32:13 asau Exp $
+# $NetBSD: Makefile,v 1.29 2020/01/18 23:30:09 rillig Exp $
DISTNAME= nut-15.8
CATEGORIES= biology
MASTER_SITES= ${MASTER_SITE_SOURCEFORGE:=nut/}
MAINTAINER= pkgsrc-users@NetBSD.org
-HOMEPAGE= http://nut.sourceforge.net/
+HOMEPAGE= https://nut.sourceforge.net/
COMMENT= Record what you eat and analyze your meals
LICENSE= gnu-gpl-v2
diff --git a/biology/primer3/Makefile b/biology/primer3/Makefile
index d290aa99b2b..f52e4636399 100644
--- a/biology/primer3/Makefile
+++ b/biology/primer3/Makefile
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.5 2018/07/18 00:06:11 joerg Exp $
+# $NetBSD: Makefile,v 1.6 2020/01/18 23:30:09 rillig Exp $
#
VERS= 2.3.6
@@ -9,7 +9,7 @@ CATEGORIES= biology
MASTER_SITES= ${MASTER_SITE_SOURCEFORGE:=primer3/}
MAINTAINER= pkgsrc-users@NetBSD.org
-HOMEPAGE= http://primer3.sourceforge.net/
+HOMEPAGE= https://primer3.sourceforge.net/
COMMENT= Design PCR primers
LICENSE= gnu-gpl-v2