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authorbacon <bacon@pkgsrc.org>2019-06-28 20:17:35 +0000
committerbacon <bacon@pkgsrc.org>2019-06-28 20:17:35 +0000
commitba6ea1f5e4c43b991c0ce4829c57e76df5e0c447 (patch)
tree873029c7d1bd085035957c6aa5368ec25d27ba77 /biology
parent3974a8694c17ecf4220a99c6f2e1eb5a4f8bf7d8 (diff)
downloadpkgsrc-ba6ea1f5e4c43b991c0ce4829c57e76df5e0c447.tar.gz
biology/ncbi-blast+: Unbreak configure
Configure script does not support --enable-option-checking Also add perl to USE_TOOLS
Diffstat (limited to 'biology')
-rw-r--r--biology/ncbi-blast+/Makefile7
1 files changed, 4 insertions, 3 deletions
diff --git a/biology/ncbi-blast+/Makefile b/biology/ncbi-blast+/Makefile
index 19b4a5ae511..be988447fb8 100644
--- a/biology/ncbi-blast+/Makefile
+++ b/biology/ncbi-blast+/Makefile
@@ -1,8 +1,8 @@
-# $NetBSD: Makefile,v 1.8 2019/04/25 07:32:37 maya Exp $
+# $NetBSD: Makefile,v 1.9 2019/06/28 20:17:35 bacon Exp $
DISTNAME= ncbi-blast-2.8.1+-src
PKGNAME= ${DISTNAME:S/+-src//:S/blast/blast+/}
-PKGREVISION= 2
+PKGREVISION= 3
CATEGORIES= biology
MASTER_SITES= https://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/LATEST/ \
https://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/${PKGVERSION_NOREV}/
@@ -21,9 +21,10 @@ SUBST_SED.configure+= -e '/--infodir=DIR/d'
SUBST_SED.configure+= -e '/--mandir=DIR/d'
SUBST_FILES.configure+= ${WRKSRC}/src/build-system/configure
-USE_TOOLS+= bash gmake
+USE_TOOLS+= bash gmake perl
USE_LANGUAGES= c c++
GNU_CONFIGURE= yes
+GNU_CONFIGURE_STRICT= no # doesn't know --enable-option-checking
REPLACE_BASH= scripts/common/impl/define_random_macros.sh
REPLACE_BASH+= src/app/blast/get_species_taxids.sh
REPLACE_PERL= src/app/blast/legacy_blast.pl src/app/blast/update_blastdb.pl