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authorwiz <wiz@pkgsrc.org>2020-03-08 16:47:24 +0000
committerwiz <wiz@pkgsrc.org>2020-03-08 16:47:24 +0000
commit091d074be0625e0f93ce469abacf962d284acb9b (patch)
tree46d7622a65ab83c29b48d9ca1331164feb4deeea /biology
parent1cd44ea113819c34e5926b7edfdda2694138a79c (diff)
downloadpkgsrc-091d074be0625e0f93ce469abacf962d284acb9b.tar.gz
*: recursive bump for libffi
Diffstat (limited to 'biology')
-rw-r--r--biology/azara/Makefile4
-rw-r--r--biology/chemtool/Makefile4
-rw-r--r--biology/gabedit/Makefile4
-rw-r--r--biology/gnome-chemistry-utils/Makefile4
-rw-r--r--biology/htslib/Makefile4
-rw-r--r--biology/ncbi-blast+/Makefile4
-rw-r--r--biology/openbabel/Makefile4
-rw-r--r--biology/py-mol/Makefile4
8 files changed, 16 insertions, 16 deletions
diff --git a/biology/azara/Makefile b/biology/azara/Makefile
index 2c91e8867c8..bb8010c970d 100644
--- a/biology/azara/Makefile
+++ b/biology/azara/Makefile
@@ -1,9 +1,9 @@
-# $NetBSD: Makefile,v 1.16 2019/08/30 17:01:32 nia Exp $
+# $NetBSD: Makefile,v 1.17 2020/03/08 16:48:51 wiz Exp $
#
DISTNAME= azara-2.7-src
PKGNAME= azara-2.7
-PKGREVISION= 7
+PKGREVISION= 8
CATEGORIES= biology
MASTER_SITES= http://www.ccpn.ac.uk/download/azara/
diff --git a/biology/chemtool/Makefile b/biology/chemtool/Makefile
index 72d923bb01e..f1de9dae6bb 100644
--- a/biology/chemtool/Makefile
+++ b/biology/chemtool/Makefile
@@ -1,7 +1,7 @@
-# $NetBSD: Makefile,v 1.62 2020/01/11 04:04:41 ryoon Exp $
+# $NetBSD: Makefile,v 1.63 2020/03/08 16:48:51 wiz Exp $
DISTNAME= chemtool-1.6.14
-PKGREVISION= 12
+PKGREVISION= 13
CATEGORIES= biology
MASTER_SITES= http://ruby.chemie.uni-freiburg.de/~martin/chemtool/
diff --git a/biology/gabedit/Makefile b/biology/gabedit/Makefile
index 47ef3747948..aabf95f8ff3 100644
--- a/biology/gabedit/Makefile
+++ b/biology/gabedit/Makefile
@@ -1,7 +1,7 @@
-# $NetBSD: Makefile,v 1.14 2020/01/26 05:26:15 rillig Exp $
+# $NetBSD: Makefile,v 1.15 2020/03/08 16:48:52 wiz Exp $
PKGNAME= gabedit-2.4.8
-PKGREVISION= 8
+PKGREVISION= 9
DISTNAME= GabeditSrc248
CATEGORIES= biology
MASTER_SITES= ${MASTER_SITE_SOURCEFORGE:=gabedit/}
diff --git a/biology/gnome-chemistry-utils/Makefile b/biology/gnome-chemistry-utils/Makefile
index da01aa42785..6109e795054 100644
--- a/biology/gnome-chemistry-utils/Makefile
+++ b/biology/gnome-chemistry-utils/Makefile
@@ -1,8 +1,8 @@
-# $NetBSD: Makefile,v 1.43 2020/01/18 23:30:09 rillig Exp $
+# $NetBSD: Makefile,v 1.44 2020/03/08 16:48:52 wiz Exp $
#
DISTNAME= gnome-chemistry-utils-0.12.13
-PKGREVISION= 30
+PKGREVISION= 31
CATEGORIES= biology
MASTER_SITES= http://download-mirror.savannah.gnu.org/releases/gchemutils/0.12/
EXTRACT_SUFX= .tar.bz2
diff --git a/biology/htslib/Makefile b/biology/htslib/Makefile
index e02e1f2e45d..d680ba2cdc1 100644
--- a/biology/htslib/Makefile
+++ b/biology/htslib/Makefile
@@ -1,7 +1,7 @@
-# $NetBSD: Makefile,v 1.12 2020/01/26 17:30:46 rillig Exp $
+# $NetBSD: Makefile,v 1.13 2020/03/08 16:48:52 wiz Exp $
DISTNAME= htslib-1.9
-PKGREVISION= 7
+PKGREVISION= 8
CATEGORIES= biology
MASTER_SITES= ${MASTER_SITE_GITHUB:=samtools/}
EXTRACT_SUFX= .tar.bz2
diff --git a/biology/ncbi-blast+/Makefile b/biology/ncbi-blast+/Makefile
index 3bb2a33442c..f13269ad63c 100644
--- a/biology/ncbi-blast+/Makefile
+++ b/biology/ncbi-blast+/Makefile
@@ -1,8 +1,8 @@
-# $NetBSD: Makefile,v 1.12 2019/11/02 22:09:00 rillig Exp $
+# $NetBSD: Makefile,v 1.13 2020/03/08 16:48:52 wiz Exp $
DISTNAME= ncbi-blast-2.8.1+-src
PKGNAME= ${DISTNAME:S/+-src//:S/blast/blast+/}
-PKGREVISION= 5
+PKGREVISION= 6
CATEGORIES= biology
MASTER_SITES= https://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/LATEST/ \
https://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/${PKGVERSION_NOREV}/
diff --git a/biology/openbabel/Makefile b/biology/openbabel/Makefile
index 62c0dce6d9d..61bf8f4aadb 100644
--- a/biology/openbabel/Makefile
+++ b/biology/openbabel/Makefile
@@ -1,9 +1,9 @@
-# $NetBSD: Makefile,v 1.36 2019/11/20 18:07:55 kamil Exp $
+# $NetBSD: Makefile,v 1.37 2020/03/08 16:48:52 wiz Exp $
#
GITHUB_PROJECT= openbabel
DISTNAME= openbabel-${RELVERSION:S/-/./g}
-PKGREVISION= 1
+PKGREVISION= 2
CATEGORIES= biology
MASTER_SITES= ${MASTER_SITE_GITHUB:=openbabel/}
GITHUB_TAG= ${PKGBASE}-${RELVERSION}
diff --git a/biology/py-mol/Makefile b/biology/py-mol/Makefile
index bf72162cb29..a0e5a9c3043 100644
--- a/biology/py-mol/Makefile
+++ b/biology/py-mol/Makefile
@@ -1,9 +1,9 @@
-# $NetBSD: Makefile,v 1.34 2019/09/02 13:20:21 adam Exp $
+# $NetBSD: Makefile,v 1.35 2020/03/08 16:48:52 wiz Exp $
DISTNAME= pymol-v1.5.0.1
PKGNAME= ${PYPKGPREFIX}-${DISTNAME:S/pymol-v/mol-/}
EGG_NAME= pymol-1.5.0.1
-PKGREVISION= 6
+PKGREVISION= 7
CATEGORIES= biology
MASTER_SITES= ${MASTER_SITE_SOURCEFORGE:=pymol/}
EXTRACT_SUFX= .tar.bz2