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authorrillig <rillig@pkgsrc.org>2020-05-25 05:19:06 +0000
committerrillig <rillig@pkgsrc.org>2020-05-25 05:19:06 +0000
commit462622a65cce4966153d70a01795e23a84419313 (patch)
tree99cfc070a38d626f352565ff03bbe8cf8699b918 /biology
parent4b0201a241a4f4bc5787327d98d4f29ca3d78f12 (diff)
downloadpkgsrc-462622a65cce4966153d70a01795e23a84419313.tar.gz
biology/ncbi-blast+: document possible array[char] bug
Diffstat (limited to 'biology')
-rw-r--r--biology/ncbi-blast+/Makefile8
1 files changed, 7 insertions, 1 deletions
diff --git a/biology/ncbi-blast+/Makefile b/biology/ncbi-blast+/Makefile
index 46661f0e018..399b02c1e49 100644
--- a/biology/ncbi-blast+/Makefile
+++ b/biology/ncbi-blast+/Makefile
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.15 2020/05/22 10:55:57 adam Exp $
+# $NetBSD: Makefile,v 1.16 2020/05/25 05:19:06 rillig Exp $
DISTNAME= ncbi-blast-2.8.1+-src
PKGNAME= ${DISTNAME:S/+-src//:S/blast/blast+/}
@@ -46,6 +46,12 @@ WRKSRC= ${WRKDIR}/${DISTNAME}/c++
CONFIGURE_ENV+= ac_cv_func_statfs=no
.endif
+# c++/src/objtools/edit/seq_entry_edit.cpp: In member function 'void ncbi::objects::edit::{anonymous}::CSeqdescSortMap::Init()':
+# c++/src/objtools/edit/seq_entry_edit.cpp:172:44: error: array subscript has type 'char' [-Werror=char-subscripts]
+# while (descr_insert_order[index] != 0)
+# Maybe fix this later.
+BUILDLINK_TRANSFORM+= rm:-Werror=char-subscripts
+
post-install:
${RM} ${DESTDIR}${PREFIX}/include/ncbi-tools++/*/*/.cvsignore.extra
${STRIP} ${DESTDIR}${PREFIX}/lib/ncbi-tools++/*.so