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| author | bacon <bacon@pkgsrc.org> | 2021-12-17 15:14:35 +0000 |
|---|---|---|
| committer | bacon <bacon@pkgsrc.org> | 2021-12-17 15:14:35 +0000 |
| commit | 880bdea8bc856b266351eb63a8cdae5d770cbe2b (patch) | |
| tree | a7cac38240983972c9538218a5ee3610ecba06a6 /biology | |
| parent | ae217b131d2b759af49baf3a5f8751966cd907d4 (diff) | |
| download | pkgsrc-880bdea8bc856b266351eb63a8cdae5d770cbe2b.tar.gz | |
biology/bcftools: Update to 1.14
Numerous fixes and enhancments since 1.12
Changes: https://github.com/samtools/bcftools/tags
Diffstat (limited to 'biology')
| -rw-r--r-- | biology/bcftools/Makefile | 6 | ||||
| -rw-r--r-- | biology/bcftools/PLIST | 2 | ||||
| -rw-r--r-- | biology/bcftools/distinfo | 8 | ||||
| -rw-r--r-- | biology/bcftools/patches/patch-Makefile | 2 |
4 files changed, 8 insertions, 10 deletions
diff --git a/biology/bcftools/Makefile b/biology/bcftools/Makefile index 5dabd735bc1..5564916c4fb 100644 --- a/biology/bcftools/Makefile +++ b/biology/bcftools/Makefile @@ -1,7 +1,6 @@ -# $NetBSD: Makefile,v 1.11 2021/05/24 19:49:10 wiz Exp $ +# $NetBSD: Makefile,v 1.12 2021/12/17 15:14:35 bacon Exp $ -DISTNAME= bcftools-1.12 -PKGREVISION= 1 +DISTNAME= bcftools-1.14 CATEGORIES= biology MASTER_SITES= ${MASTER_SITE_GITHUB:=samtools/} @@ -49,7 +48,6 @@ post-install: ${MV} ${DESTDIR}${PREFIX}/bin/vcfutils.pl \ ${DESTDIR}${PREFIX}/bin/vcfutils -BUILDLINK_API_DEPENDS.htslib+= htslib>=1.10.2 .include "../../biology/htslib/buildlink3.mk" .include "../../devel/zlib/buildlink3.mk" .include "../../lang/python/application.mk" diff --git a/biology/bcftools/PLIST b/biology/bcftools/PLIST index 9e7b8ca2840..69b3ce91020 100644 --- a/biology/bcftools/PLIST +++ b/biology/bcftools/PLIST @@ -1,4 +1,4 @@ -@comment $NetBSD: PLIST,v 1.3 2021/03/20 18:17:07 bacon Exp $ +@comment $NetBSD: PLIST,v 1.4 2021/12/17 15:14:35 bacon Exp $ bin/bcftools bin/color-chrs bin/gff2gff.py diff --git a/biology/bcftools/distinfo b/biology/bcftools/distinfo index f434f28f739..712fe73e4ec 100644 --- a/biology/bcftools/distinfo +++ b/biology/bcftools/distinfo @@ -1,6 +1,6 @@ -$NetBSD: distinfo,v 1.5 2021/10/26 10:03:36 nia Exp $ +$NetBSD: distinfo,v 1.6 2021/12/17 15:14:35 bacon Exp $ -BLAKE2s (bcftools-1.12.tar.gz) = 72e0ab50861e7394723dece1e711f5a9ddd134096b8f7526b0007a31a8091329 -SHA512 (bcftools-1.12.tar.gz) = f43074989a01cf4ef32a968935f5e5f3eacf2c04b9aa558d739166e3d96d3a498965d27db6482b2992b5d60fed3d2945ef3fd61fcc79b5dbe062994d49df4ad2 -Size (bcftools-1.12.tar.gz) = 3048508 bytes +BLAKE2s (bcftools-1.14.tar.gz) = e713f23cf7f125a1ebc5ba21014ddeeb1ae7df6fcd2f2a0c5f8b000861bbf0f9 +SHA512 (bcftools-1.14.tar.gz) = eef01bce76858a5c1a5f5988e23325175dbf30801a4a9cfab05b21c0b972849f9691c540a030e92eaa42b14ce9c487079e0391b1526ae4f7e9707d59a90d4644 +Size (bcftools-1.14.tar.gz) = 3326994 bytes SHA1 (patch-Makefile) = 9dfe7b5dcf77deac6d248d7612440780ec8a3731 diff --git a/biology/bcftools/patches/patch-Makefile b/biology/bcftools/patches/patch-Makefile index 8cb83b52df7..4cf7b714d1c 100644 --- a/biology/bcftools/patches/patch-Makefile +++ b/biology/bcftools/patches/patch-Makefile @@ -1,4 +1,4 @@ -$NetBSD: patch-Makefile,v 1.2 2021/03/20 18:17:07 bacon Exp $ +$NetBSD: patch-Makefile,v 1.3 2021/12/17 15:14:35 bacon Exp $ # Respect pkgsrc env |