diff options
author | adam <adam@pkgsrc.org> | 2021-12-08 16:01:42 +0000 |
---|---|---|
committer | adam <adam@pkgsrc.org> | 2021-12-08 16:01:42 +0000 |
commit | ac26554d9f5c20806cbab620560e5cdb9f5af267 (patch) | |
tree | f19c5de6d0b7dd975754ab007486cb1a5d65f5ef /biology | |
parent | 89042bb7303ab35491df57328b4ced04ed0f68bc (diff) | |
download | pkgsrc-ac26554d9f5c20806cbab620560e5cdb9f5af267.tar.gz |
revbump for icu and libffi
Diffstat (limited to 'biology')
-rw-r--r-- | biology/azara/Makefile | 4 | ||||
-rw-r--r-- | biology/bodr/Makefile | 4 | ||||
-rw-r--r-- | biology/chemtool/Makefile | 4 | ||||
-rw-r--r-- | biology/gabedit/Makefile | 4 | ||||
-rw-r--r-- | biology/gnome-chemistry-utils/Makefile | 4 | ||||
-rw-r--r-- | biology/gromacs/Makefile | 4 | ||||
-rw-r--r-- | biology/htslib/Makefile | 4 | ||||
-rw-r--r-- | biology/molsketch/Makefile | 4 | ||||
-rw-r--r-- | biology/ncbi-blast+/Makefile | 4 | ||||
-rw-r--r-- | biology/openbabel/Makefile | 4 | ||||
-rw-r--r-- | biology/openbabel/buildlink3.mk | 4 | ||||
-rw-r--r-- | biology/py-mol/Makefile | 4 |
12 files changed, 24 insertions, 24 deletions
diff --git a/biology/azara/Makefile b/biology/azara/Makefile index bb8010c970d..84ae4a92cd9 100644 --- a/biology/azara/Makefile +++ b/biology/azara/Makefile @@ -1,9 +1,9 @@ -# $NetBSD: Makefile,v 1.17 2020/03/08 16:48:51 wiz Exp $ +# $NetBSD: Makefile,v 1.18 2021/12/08 16:03:23 adam Exp $ # DISTNAME= azara-2.7-src PKGNAME= azara-2.7 -PKGREVISION= 8 +PKGREVISION= 9 CATEGORIES= biology MASTER_SITES= http://www.ccpn.ac.uk/download/azara/ diff --git a/biology/bodr/Makefile b/biology/bodr/Makefile index de6c145e5d7..03a6e69cf48 100644 --- a/biology/bodr/Makefile +++ b/biology/bodr/Makefile @@ -1,8 +1,8 @@ -# $NetBSD: Makefile,v 1.17 2021/05/24 19:49:10 wiz Exp $ +# $NetBSD: Makefile,v 1.18 2021/12/08 16:03:23 adam Exp $ # DISTNAME= bodr-9 -PKGREVISION= 14 +PKGREVISION= 15 CATEGORIES= biology MASTER_SITES= ${MASTER_SITE_SOURCEFORGE:=bodr/} diff --git a/biology/chemtool/Makefile b/biology/chemtool/Makefile index 496dd1f0110..0f0d4362fc0 100644 --- a/biology/chemtool/Makefile +++ b/biology/chemtool/Makefile @@ -1,7 +1,7 @@ -# $NetBSD: Makefile,v 1.65 2020/08/17 20:18:13 leot Exp $ +# $NetBSD: Makefile,v 1.66 2021/12/08 16:03:23 adam Exp $ DISTNAME= chemtool-1.6.14 -PKGREVISION= 15 +PKGREVISION= 16 CATEGORIES= biology MASTER_SITES= http://ruby.chemie.uni-freiburg.de/~martin/chemtool/ diff --git a/biology/gabedit/Makefile b/biology/gabedit/Makefile index 0e35d05ab90..0a8f908520d 100644 --- a/biology/gabedit/Makefile +++ b/biology/gabedit/Makefile @@ -1,7 +1,7 @@ -# $NetBSD: Makefile,v 1.17 2020/08/17 20:18:13 leot Exp $ +# $NetBSD: Makefile,v 1.18 2021/12/08 16:03:23 adam Exp $ PKGNAME= gabedit-2.4.8 -PKGREVISION= 11 +PKGREVISION= 12 DISTNAME= GabeditSrc248 CATEGORIES= biology MASTER_SITES= ${MASTER_SITE_SOURCEFORGE:=gabedit/} diff --git a/biology/gnome-chemistry-utils/Makefile b/biology/gnome-chemistry-utils/Makefile index 6e65ac5ca6f..c441e7c33a1 100644 --- a/biology/gnome-chemistry-utils/Makefile +++ b/biology/gnome-chemistry-utils/Makefile @@ -1,8 +1,8 @@ -# $NetBSD: Makefile,v 1.53 2021/05/24 19:49:10 wiz Exp $ +# $NetBSD: Makefile,v 1.54 2021/12/08 16:03:23 adam Exp $ # DISTNAME= gnome-chemistry-utils-0.14.16 -PKGREVISION= 6 +PKGREVISION= 7 CATEGORIES= biology MASTER_SITES= http://download-mirror.savannah.gnu.org/releases/gchemutils/0.14/ EXTRACT_SUFX= .tar.bz2 diff --git a/biology/gromacs/Makefile b/biology/gromacs/Makefile index d37d96c8164..458dab0a39f 100644 --- a/biology/gromacs/Makefile +++ b/biology/gromacs/Makefile @@ -1,7 +1,7 @@ -# $NetBSD: Makefile,v 1.25 2021/06/01 09:12:22 wiz Exp $ +# $NetBSD: Makefile,v 1.26 2021/12/08 16:03:23 adam Exp $ DISTNAME= gromacs-4.5.5 -PKGREVISION= 14 +PKGREVISION= 15 CATEGORIES= biology MASTER_SITES= ftp://ftp.gromacs.org/pub/gromacs/ diff --git a/biology/htslib/Makefile b/biology/htslib/Makefile index 7f6d1336bdb..1679bb60fb8 100644 --- a/biology/htslib/Makefile +++ b/biology/htslib/Makefile @@ -1,7 +1,7 @@ -# $NetBSD: Makefile,v 1.22 2021/09/29 19:00:20 adam Exp $ +# $NetBSD: Makefile,v 1.23 2021/12/08 16:03:23 adam Exp $ DISTNAME= htslib-1.12 -PKGREVISION= 3 +PKGREVISION= 4 CATEGORIES= biology # Github-generated distfiles are incomplete, use custom tarballs instead MASTER_SITES= https://github.com/samtools/htslib/releases/download/${PKGVERSION_NOREV}/ diff --git a/biology/molsketch/Makefile b/biology/molsketch/Makefile index 1f4acade916..621bfd0c61e 100644 --- a/biology/molsketch/Makefile +++ b/biology/molsketch/Makefile @@ -1,8 +1,8 @@ -# $NetBSD: Makefile,v 1.4 2021/04/21 11:41:03 adam Exp $ +# $NetBSD: Makefile,v 1.5 2021/12/08 16:03:23 adam Exp $ DISTNAME= Molsketch-0.7.2-src PKGNAME= ${DISTNAME:S/-src//:tl} -PKGREVISION= 1 +PKGREVISION= 2 CATEGORIES= biology MASTER_SITES= ${MASTER_SITE_SOURCEFORGE:=molsketch/} diff --git a/biology/ncbi-blast+/Makefile b/biology/ncbi-blast+/Makefile index 573d8784259..06bc43ccda9 100644 --- a/biology/ncbi-blast+/Makefile +++ b/biology/ncbi-blast+/Makefile @@ -1,8 +1,8 @@ -# $NetBSD: Makefile,v 1.25 2021/09/29 19:00:20 adam Exp $ +# $NetBSD: Makefile,v 1.26 2021/12/08 16:03:24 adam Exp $ DISTNAME= ncbi-blast-2.11.0+-src PKGNAME= ${DISTNAME:S/+-src//:S/blast/blast+/} -PKGREVISION= 1 +PKGREVISION= 2 CATEGORIES= biology MASTER_SITES= https://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/LATEST/ \ https://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/${PKGVERSION_NOREV}/ diff --git a/biology/openbabel/Makefile b/biology/openbabel/Makefile index 62cb6fe13c1..e50591ab46b 100644 --- a/biology/openbabel/Makefile +++ b/biology/openbabel/Makefile @@ -1,9 +1,9 @@ -# $NetBSD: Makefile,v 1.49 2021/09/29 19:00:21 adam Exp $ +# $NetBSD: Makefile,v 1.50 2021/12/08 16:01:45 adam Exp $ # GITHUB_PROJECT= openbabel DISTNAME= openbabel-${RELVERSION:S/-/./g} -PKGREVISION= 8 +PKGREVISION= 9 CATEGORIES= biology MASTER_SITES= ${MASTER_SITE_GITHUB:=openbabel/} GITHUB_TAG= ${PKGBASE}-${RELVERSION} diff --git a/biology/openbabel/buildlink3.mk b/biology/openbabel/buildlink3.mk index 2e5950d0519..7d65fdc64da 100644 --- a/biology/openbabel/buildlink3.mk +++ b/biology/openbabel/buildlink3.mk @@ -1,4 +1,4 @@ -# $NetBSD: buildlink3.mk,v 1.10 2021/04/21 11:40:13 adam Exp $ +# $NetBSD: buildlink3.mk,v 1.11 2021/12/08 16:01:45 adam Exp $ BUILDLINK_TREE+= openbabel @@ -6,7 +6,7 @@ BUILDLINK_TREE+= openbabel OPENBABEL_BUILDLINK3_MK:= BUILDLINK_API_DEPENDS.openbabel+= openbabel>=3.0.0nb1 -BUILDLINK_ABI_DEPENDS.openbabel?= openbabel>=3.1.1nb6 +BUILDLINK_ABI_DEPENDS.openbabel?= openbabel>=3.1.1nb8 BUILDLINK_PKGSRCDIR.openbabel?= ../../biology/openbabel .include "../../graphics/cairo/buildlink3.mk" diff --git a/biology/py-mol/Makefile b/biology/py-mol/Makefile index 1147b6cec39..61d504eff7a 100644 --- a/biology/py-mol/Makefile +++ b/biology/py-mol/Makefile @@ -1,9 +1,9 @@ -# $NetBSD: Makefile,v 1.37 2020/10/12 21:51:59 bacon Exp $ +# $NetBSD: Makefile,v 1.38 2021/12/08 16:03:24 adam Exp $ DISTNAME= pymol-v1.5.0.1 PKGNAME= ${PYPKGPREFIX}-${DISTNAME:S/pymol-v/mol-/} EGG_NAME= pymol-1.5.0.1 -PKGREVISION= 8 +PKGREVISION= 9 CATEGORIES= biology MASTER_SITES= ${MASTER_SITE_SOURCEFORGE:=pymol/} EXTRACT_SUFX= .tar.bz2 |