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authorbad <bad>2003-12-15 20:18:33 +0000
committerbad <bad>2003-12-15 20:18:33 +0000
commit7fc2bebb4418c57e4f290319aacbd4d2639651c5 (patch)
tree6bcc40840872c8e21e2bce6668789f36fe3baaed /databases/jdb
parente68270c3e9bb4d004fb7389bae41daa256bc98d8 (diff)
downloadpkgsrc-7fc2bebb4418c57e4f290319aacbd4d2639651c5.tar.gz
Update jdb to 1.12 plus the patch for the problem with trailing spaces in
dbstats from Heidemann's web page. Changes since 1.7 apart from bugfixes: 1.12, 30-Oct-02 - NEW: dbcolmultiscale - NEW: dbcol has -r option for "relaxed error checking" - NEW: dbcolneaten has new -e option to strip end-of-line spaces - NEW: dbrow finally has a -v option to negate the test - NEW: db_to_html_table: simple conversion to html tables - NEW: dblib now has a function dblib_text2html() that will 1.11, 2-Nov-01 - NEW: dbcolneaten now supports "field specifiers" that allow some control over how wide columns should be - OPTIMIZATION: dbsort now tries hard to be filesystem cache-friendly 1.10, 10-Apr-01 - NEW: dbstats now includes a -S option to optimize work on pre-sorted data (inspired by code contributed by Haobo Yu) 1.9, 6-Nov-00 - NEW: dbfilesplit, split a single input file into multiple output files. 1.8, 28-Jun-00 - NEW: dbrowuniq now optionally checks for uniqueness only on certain fields - NEW: dbrowsplituniq makes one pass through a file and splits it into separate files based on the given fields - NEW: converter for "crl" format network traces - NEW: anywhere you use arbitrary code (like dbroweval), _last_foo now maps to the last row's value for field _foo. - OPTIMIZATION: comment processing slightly changed so that dbmultistats now is much faster on files with lots of comments.
Diffstat (limited to 'databases/jdb')
-rw-r--r--databases/jdb/DESCR20
-rw-r--r--databases/jdb/Makefile4
-rw-r--r--databases/jdb/PLIST16
-rw-r--r--databases/jdb/distinfo7
-rw-r--r--databases/jdb/patches/patch-aa22
5 files changed, 49 insertions, 20 deletions
diff --git a/databases/jdb/DESCR b/databases/jdb/DESCR
index 6bef375360b..f977254b3ae 100644
--- a/databases/jdb/DESCR
+++ b/databases/jdb/DESCR
@@ -1,10 +1,12 @@
-JDB is a package of commands for manipulating flat-ASCII databases from
-shell scripts. JDB is useful to process medium amounts of data. JDB is
-very good at doing things like:
+JDB is package of commands for manipulating flat-ASCII databases from
+shell scripts. JDB is useful to process medium amounts of data (with
+very little data you'd do it by hand, with megabytes you might want a
+real database). JDB is very good at doing things like:
- * extracting measurements from experimental output
- * re-examining data to address different hypotheses
- * joining data from different experiments
- * computing statistics on data (mean, confidence intervals, histograms,
- correlations)
- * reformatting data for graphing programs
+ - extracting measurements from experimental output
+ - re-examining data to address different hypotheses
+ - joining data from different experiments
+ - eliminating/detecting outliers
+ - computing statistics on data (mean, confidence intervals,
+ correlations, histograms)
+ - reformatting data for graphing programs
diff --git a/databases/jdb/Makefile b/databases/jdb/Makefile
index bfcc6e7e9d9..a8f5b7b97a7 100644
--- a/databases/jdb/Makefile
+++ b/databases/jdb/Makefile
@@ -1,6 +1,6 @@
-# $NetBSD: Makefile,v 1.7 2003/07/21 16:39:05 martti Exp $
+# $NetBSD: Makefile,v 1.8 2003/12/15 20:18:33 bad Exp $
-DISTNAME= jdb-1.7
+DISTNAME= jdb-1.12
CATEGORIES= databases
MASTER_SITES= http://www.isi.edu/~johnh/SOFTWARE/JDB/
diff --git a/databases/jdb/PLIST b/databases/jdb/PLIST
index 52f556b03e4..99915f81b64 100644
--- a/databases/jdb/PLIST
+++ b/databases/jdb/PLIST
@@ -1,5 +1,7 @@
-@comment $NetBSD: PLIST,v 1.1 2001/11/01 00:11:48 zuntum Exp $
+@comment $NetBSD: PLIST,v 1.2 2003/12/15 20:18:33 bad Exp $
+bin/crl_to_db
bin/db2dcliff
+bin/db_to_html_table
bin/dbcol
bin/dbcolcreate
bin/dbcoldefine
@@ -8,6 +10,7 @@ bin/dbcolhisto
bin/dbcolize
bin/dbcolmerge
bin/dbcolmovingstats
+bin/dbcolmultiscale
bin/dbcolneaten
bin/dbcolpercentile
bin/dbcolrename
@@ -15,6 +18,7 @@ bin/dbcolscorrelate
bin/dbcolsplit
bin/dbcolstats
bin/dbcoltighten
+bin/dbfilesplit
bin/dbformmail
bin/dbjoin
bin/dblistize
@@ -25,6 +29,7 @@ bin/dbrowaccumulate
bin/dbrowdiff
bin/dbrowenumerate
bin/dbroweval
+bin/dbrowsplituniq
bin/dbrowuniq
bin/dbsort
bin/dbstats
@@ -32,16 +37,15 @@ bin/dbstripcomments
bin/dbstripextraheaders
bin/dbstripleadingspace
bin/dmalloc_to_db
+bin/ipchain_logs_to_db
bin/kitrace_to_db
bin/ns_to_db
bin/tabdelim_to_db
bin/tcpdump_to_db
-share/jdb/README
share/jdb/COPYING
-share/jdb/release
-share/jdb/round.pl
-share/jdb/t_distr.pl
-share/jdb/dblib.pl
+share/jdb/README
share/jdb/DbGetopt.pm
share/jdb/DbTDistr.pm
+share/jdb/dblib.pl
+share/jdb/release
@dirrm share/jdb
diff --git a/databases/jdb/distinfo b/databases/jdb/distinfo
index 4d907c1a3e0..86441afe786 100644
--- a/databases/jdb/distinfo
+++ b/databases/jdb/distinfo
@@ -1,4 +1,5 @@
-$NetBSD: distinfo,v 1.2 2001/04/18 16:10:58 agc Exp $
+$NetBSD: distinfo,v 1.3 2003/12/15 20:18:33 bad Exp $
-SHA1 (jdb-1.7.tar.gz) = 8c3e45ced221f0337f205cc5dec071ecf80ce176
-Size (jdb-1.7.tar.gz) = 109011 bytes
+SHA1 (jdb-1.12.tar.gz) = 63dd7a5f700628734a8316612d86c9a9b5f0e787
+Size (jdb-1.12.tar.gz) = 141134 bytes
+SHA1 (patch-aa) = 1b0726a8b8b7b2295bc5e7f30e153d2a56d99dcf
diff --git a/databases/jdb/patches/patch-aa b/databases/jdb/patches/patch-aa
new file mode 100644
index 00000000000..f3a9b695433
--- /dev/null
+++ b/databases/jdb/patches/patch-aa
@@ -0,0 +1,22 @@
+$NetBSD: patch-aa,v 1.3 2003/12/15 20:18:33 bad Exp $
+
+--- dblib.pl.orig Mon Oct 28 23:46:40 2002
++++ dblib.pl Mon Dec 15 21:04:54 2003
+@@ -2,7 +2,7 @@
+
+ #
+ # dblib.pl
+-# Copyright (C) 1991-1998 by John Heidemann <johnh@isi.edu>
++# Copyright (C) 1991-2002 by John Heidemann <johnh@isi.edu>
+ # $Id: patch-aa,v 1.3 2003/12/15 20:18:33 bad Exp $
+ #
+ # This program is distributed under terms of the GNU general
+@@ -330,7 +330,7 @@
+
+ sub force_numeric {
+ my($value, $ignore_non_numeric) = @_;
+- if ($value =~ /^[-+]?[0-9]+(.[0-9]+)?(e[-+0-9]+)?$/) {
++ if ($value =~ /^\s*[-+]?[0-9]+(.[0-9]+)?(e[-+0-9]+)?\s*$/) {
+ return $value + 0.0; # force numeric
+ } else {
+ if ($ignore_non_numeric) {