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authorwen <wen@pkgsrc.org>2016-08-07 10:36:43 +0000
committerwen <wen@pkgsrc.org>2016-08-07 10:36:43 +0000
commit5d7f9b507adf54062cc97437c664a78bd10f422d (patch)
tree10925fc8a87b90d7c547ff1876d6fd6c2c5c323a /geography
parent4bee4a1e5595f734241b658c1b02b64d61d697db (diff)
downloadpkgsrc-5d7f9b507adf54062cc97437c664a78bd10f422d.tar.gz
Update to 1.0.2
Upstream changes: 1.0.2: (doi: 10.5281/zenodo.49636) - obspy.core: * Added workaround for numpy issue where many FFTs of various lengths fill a cache that never gets cleared, effectively creating a memory leak (see #1424). * Trace.filter and Stream.filter don't work on masked arrays anymore because it produced unpredictable results due to the un-initialized data-chunk. The uninitialized masked gap is now also initialized to np.nan in case of floating point data which and a consistent fill value in case of integer data. (see #1363) - obspy.clients.fdsn: * Fixing issue with location codes potentially resulting in unwanted data to be requested. (see #1422) * Included low-gain seismometers in default channel filters in mass-downloader, also included non-oriented channels by default (see #1373). - obspy.db: * Fixed a bug in obspy-indexer command line script (see #1369, command line script was not working, probably since 0.10.0) - obspy.imaging: * Fixed a bug that leads to pressure/tension color blending when plotting semi-transparent DC beachball patches (i.e. with "alpha" not equal to 1, see #1464) * Fixed a bug when plotting non-DC beachball patches without fill colors (i.e. with "nofill=True", see #1464) * Fix arbitrary units in waveform section plot's offset axis, making it possible to add customizations to the plot afterwards (see #1382, see #1383) - obspy.io.ascii: * Fixed a bug that lead to wrong header information in output files when writing non-integer sampling rate data to SLIST or TSPAIR formats (see #1447) - obspy.io.cmtsolution: * Make sure newer CMTSOLUTION files can also be read (see #1479). - obspy.io.gse2: * Fixed a bug that could lead to network code not present in GSE2 output (see #1448) - obspy.io.mseed: * Fixed a bug in obspy-mseed-recordanalyzer (see #1386) - obspy.io.nlloc: * Use geographic coordinates from the NonLinLoc Hypocenter-Phase file if no custom coordinate converter is provided. (see #1390) * Fix reading NonLinLoc Hypocenter-Phase files with more than one hypocenter in it. (see #1480) * Fix reading NonLinLoc Hypocenter-Phase files with unicode characters in them. (see #1483) - obspy.io.quakeml: * Fixed issue with improperly raised warnings when the same file is read twice. (#1376) * Fix writing empty network/station/channel codes in WaveformStreamID objects to QuakeML. (see #1483) - obspy.io.sac: * Try to set SAC distances (dist, az, baz, gcarc) on read, if "lcalda" is true. If "dist" header is found, distances aren't calculated. * SACTrace class returns header values as native Python types instead of NumPy types. * SACTrace.iqual is no longer accepts enumerated string values, but arbitrary integer values. (see #1472) * SACTrace.read now replaces non-ASCII and null-termination characters in string headers with whitespace unless the "debug_strings=True" flag is used. (see #1432) - obspy.io.stationxml: * Always set the number attribute for poles and zeros. (see #1481) - obspy.signal: * PPSD.plot(): fix plotting of percentiles, mode and mean and setting period limits when using "xaxis_frequency=True" (see #1406, #1416) * Work around a bug in SciPy that results in wrong results for bandpass filter when using Nyquist frequency (or higher) as high corner of the passband (see #1451) - obspy.taup: * Fixing path for Pn. (see #1392)
Diffstat (limited to 'geography')
-rw-r--r--geography/py-obspy/Makefile4
-rw-r--r--geography/py-obspy/PLIST14
-rw-r--r--geography/py-obspy/distinfo10
3 files changed, 19 insertions, 9 deletions
diff --git a/geography/py-obspy/Makefile b/geography/py-obspy/Makefile
index efc4a5f46b3..a63fe7d43ef 100644
--- a/geography/py-obspy/Makefile
+++ b/geography/py-obspy/Makefile
@@ -1,6 +1,6 @@
-# $NetBSD: Makefile,v 1.5 2016/07/16 04:11:55 wen Exp $
+# $NetBSD: Makefile,v 1.6 2016/08/07 10:36:43 wen Exp $
-DISTNAME= obspy-1.0.1
+DISTNAME= obspy-1.0.2
PKGNAME= ${PYPKGPREFIX}-${DISTNAME}
CATEGORIES= geography python
MASTER_SITES= ${MASTER_SITE_PYPI:=o/obspy/}
diff --git a/geography/py-obspy/PLIST b/geography/py-obspy/PLIST
index 95611e3ed2f..906486563f1 100644
--- a/geography/py-obspy/PLIST
+++ b/geography/py-obspy/PLIST
@@ -1,4 +1,4 @@
-@comment $NetBSD: PLIST,v 1.2 2016/07/16 04:11:55 wen Exp $
+@comment $NetBSD: PLIST,v 1.3 2016/08/07 10:36:43 wen Exp $
bin/obspy-dataless2resp
bin/obspy-dataless2xseed
bin/obspy-flinn-engdahl
@@ -18,7 +18,6 @@ ${PYSITELIB}/${EGG_FILE}/dependency_links.txt
${PYSITELIB}/${EGG_FILE}/entry_points.txt
${PYSITELIB}/${EGG_FILE}/namespace_packages.txt
${PYSITELIB}/${EGG_FILE}/not-zip-safe
-${PYSITELIB}/${EGG_FILE}/pbr.json
${PYSITELIB}/${EGG_FILE}/requires.txt
${PYSITELIB}/${EGG_FILE}/top_level.txt
${PYSITELIB}/obspy/CONTRIBUTORS.txt
@@ -350,10 +349,12 @@ ${PYSITELIB}/obspy/core/tests/data/Modified_IRIS_response_level_station.xml
${PYSITELIB}/obspy/core/tests/data/TM.SKLT..BHZ_faulty_response.xml
${PYSITELIB}/obspy/core/tests/data/XM.05.seed
${PYSITELIB}/obspy/core/tests/data/XM.05.xml
+${PYSITELIB}/obspy/core/tests/data/events_longitude_wrap.zmap
${PYSITELIB}/obspy/core/tests/data/iris_events.xml
${PYSITELIB}/obspy/core/tests/data/neries_events.xml
${PYSITELIB}/obspy/core/tests/data/stationxml_BK.CMB.__.LKS.xml
${PYSITELIB}/obspy/core/tests/data/stationxml_IU.ANTO.30.LDO.xml
+${PYSITELIB}/obspy/core/tests/data/tarfile_impostor.mseed
${PYSITELIB}/obspy/core/tests/data/test.tar
${PYSITELIB}/obspy/core/tests/data/test.tar.bz2
${PYSITELIB}/obspy/core/tests/data/test.tar.gz
@@ -363,9 +364,11 @@ ${PYSITELIB}/obspy/core/tests/images/basemap_combined_stations-events.png
${PYSITELIB}/obspy/core/tests/images/catalog-basemap1.png
${PYSITELIB}/obspy/core/tests/images/catalog-basemap2.png
${PYSITELIB}/obspy/core/tests/images/catalog-basemap3.png
+${PYSITELIB}/obspy/core/tests/images/catalog-basemap_long-wrap.png
${PYSITELIB}/obspy/core/tests/images/catalog-cartopy1.png
${PYSITELIB}/obspy/core/tests/images/catalog-cartopy2.png
${PYSITELIB}/obspy/core/tests/images/catalog-cartopy3.png
+${PYSITELIB}/obspy/core/tests/images/catalog-cartopy_long-wrap.png
${PYSITELIB}/obspy/core/tests/images/channel_response.png
${PYSITELIB}/obspy/core/tests/images/event.png
${PYSITELIB}/obspy/core/tests/images/image.png
@@ -618,6 +621,7 @@ ${PYSITELIB}/obspy/imaging/tests/images/plot.png
${PYSITELIB}/obspy/imaging/tests/images/plot_nomerge.png
${PYSITELIB}/obspy/imaging/tests/images/ppsd.png
${PYSITELIB}/obspy/imaging/tests/images/ppsd_cumulative.png
+${PYSITELIB}/obspy/imaging/tests/images/ppsd_freq.png
${PYSITELIB}/obspy/imaging/tests/images/scan.png
${PYSITELIB}/obspy/imaging/tests/images/scan_mult_sampl.png
${PYSITELIB}/obspy/imaging/tests/images/scan_times.png
@@ -747,6 +751,7 @@ ${PYSITELIB}/obspy/io/cmtsolution/tests/__init__.pyc
${PYSITELIB}/obspy/io/cmtsolution/tests/__init__.pyo
${PYSITELIB}/obspy/io/cmtsolution/tests/data/CMTSOLUTION
${PYSITELIB}/obspy/io/cmtsolution/tests/data/CMTSOLUTION_EXPLOSION
+${PYSITELIB}/obspy/io/cmtsolution/tests/data/CMTSOLUTION_NEW
${PYSITELIB}/obspy/io/cmtsolution/tests/data/MULTIPLE_EVENTS
${PYSITELIB}/obspy/io/cmtsolution/tests/test_core.py
${PYSITELIB}/obspy/io/cmtsolution/tests/test_core.pyc
@@ -843,6 +848,7 @@ ${PYSITELIB}/obspy/io/gse2/tests/data/GRF_031102_0225.GSE.wrong_chksum
${PYSITELIB}/obspy/io/gse2/tests/data/STA2.testlines
${PYSITELIB}/obspy/io/gse2/tests/data/STA2.testlines_out
${PYSITELIB}/obspy/io/gse2/tests/data/acc.gse
+${PYSITELIB}/obspy/io/gse2/tests/data/boa___00_07a.gse
${PYSITELIB}/obspy/io/gse2/tests/data/broken_head.gse2
${PYSITELIB}/obspy/io/gse2/tests/data/loc_RJOB20050831023349.z
${PYSITELIB}/obspy/io/gse2/tests/data/loc_RJOB20050831023349.z.wrong_chksum
@@ -1066,8 +1072,11 @@ ${PYSITELIB}/obspy/io/nlloc/tests/data/nlloc.hyp
${PYSITELIB}/obspy/io/nlloc/tests/data/nlloc.obs
${PYSITELIB}/obspy/io/nlloc/tests/data/nlloc.qml
${PYSITELIB}/obspy/io/nlloc/tests/data/nlloc.scat
+${PYSITELIB}/obspy/io/nlloc/tests/data/nlloc_custom.hyp
+${PYSITELIB}/obspy/io/nlloc/tests/data/nlloc_custom.qml
${PYSITELIB}/obspy/io/nlloc/tests/data/nlloc_scat.npy
${PYSITELIB}/obspy/io/nlloc/tests/data/nlloc_scat_converted.npy
+${PYSITELIB}/obspy/io/nlloc/tests/data/vanua.sum.grid0.loc.hyp
${PYSITELIB}/obspy/io/nlloc/tests/test_core.py
${PYSITELIB}/obspy/io/nlloc/tests/test_core.pyc
${PYSITELIB}/obspy/io/nlloc/tests/test_core.pyo
@@ -1167,6 +1176,7 @@ ${PYSITELIB}/obspy/io/sac/tests/data/dis.G.SCZ.__.BHE_short
${PYSITELIB}/obspy/io/sac/tests/data/interpolation_test_interpolated_delta_0.003.sac
${PYSITELIB}/obspy/io/sac/tests/data/interpolation_test_interpolated_delta_0.077.sac
${PYSITELIB}/obspy/io/sac/tests/data/interpolation_test_random_waveform_delta_0.01_npts_50.sac
+${PYSITELIB}/obspy/io/sac/tests/data/non_ascii.sac
${PYSITELIB}/obspy/io/sac/tests/data/null_terminated.sac
${PYSITELIB}/obspy/io/sac/tests/data/seism-longer.sac
${PYSITELIB}/obspy/io/sac/tests/data/seism-shorter.sac
diff --git a/geography/py-obspy/distinfo b/geography/py-obspy/distinfo
index 77744fabcde..401abe07472 100644
--- a/geography/py-obspy/distinfo
+++ b/geography/py-obspy/distinfo
@@ -1,6 +1,6 @@
-$NetBSD: distinfo,v 1.3 2016/07/16 04:11:55 wen Exp $
+$NetBSD: distinfo,v 1.4 2016/08/07 10:36:43 wen Exp $
-SHA1 (obspy-1.0.1.zip) = 7f27dadc9725f01a10f4f3f4e447f92f61aac0d5
-RMD160 (obspy-1.0.1.zip) = 84d961c24a6445d0438200f3c3bbf8b9614eefbc
-SHA512 (obspy-1.0.1.zip) = 0c530fb33b293aa7647d4adbfc1f3139afbc7d7d761062b077b8ff038bb1cefcad1c668c2d4385f8455feb641b518fa2ad7f54d95066d6e4c412abc7359401d2
-Size (obspy-1.0.1.zip) = 20118442 bytes
+SHA1 (obspy-1.0.2.zip) = 7c43a884c80b90e987d6bd7786fc9092e34272f3
+RMD160 (obspy-1.0.2.zip) = be379d314d9a0fcf05c40c7c99212ee57e646b5a
+SHA512 (obspy-1.0.2.zip) = 372d0a694fa200055efcb99b69f9451a778ee236bd2423d126772e0bf8fd91dc924167c4116f7711a47d687117e4790f89552ec365bc2fd49db75fc54701ef22
+Size (obspy-1.0.2.zip) = 22774079 bytes