diff options
| author | rillig <rillig@pkgsrc.org> | 2005-11-04 08:13:15 +0000 |
|---|---|---|
| committer | rillig <rillig@pkgsrc.org> | 2005-11-04 08:13:15 +0000 |
| commit | b037bdefa78c3113b536c85bf352c391b52b6c56 (patch) | |
| tree | 575bd9ea10e1e473c82cade0b632b46bfab97fc1 /math/R-genetics | |
| parent | d2ee60a5235b6c96e8ea20575d22a662cc81c753 (diff) | |
| download | pkgsrc-b037bdefa78c3113b536c85bf352c391b52b6c56.tar.gz | |
Imported R-genetics from pkgsrc-wip.
Classes and methods for handling genetic data. Includes classes to
represent genotypes and haplotypes at single markers up to multiple
markers on multiple chromosomes. Function include allele frequencies,
flagging homo/heterozygotes, flagging carriers of certain alleles,
estimating and testing for Hardy-Weinberg disequilibrium, estimating
and testing for linkage disequilibrium, ...
Diffstat (limited to 'math/R-genetics')
| -rw-r--r-- | math/R-genetics/DESCR | 6 | ||||
| -rw-r--r-- | math/R-genetics/Makefile | 15 | ||||
| -rw-r--r-- | math/R-genetics/PLIST | 1 | ||||
| -rw-r--r-- | math/R-genetics/distinfo | 5 |
4 files changed, 27 insertions, 0 deletions
diff --git a/math/R-genetics/DESCR b/math/R-genetics/DESCR new file mode 100644 index 00000000000..0fba1a2b980 --- /dev/null +++ b/math/R-genetics/DESCR @@ -0,0 +1,6 @@ +Classes and methods for handling genetic data. Includes classes to +represent genotypes and haplotypes at single markers up to multiple +markers on multiple chromosomes. Function include allele frequencies, +flagging homo/heterozygotes, flagging carriers of certain alleles, +estimating and testing for Hardy-Weinberg disequilibrium, estimating +and testing for linkage disequilibrium, ... diff --git a/math/R-genetics/Makefile b/math/R-genetics/Makefile new file mode 100644 index 00000000000..5df26596d14 --- /dev/null +++ b/math/R-genetics/Makefile @@ -0,0 +1,15 @@ +# $NetBSD: Makefile,v 1.1.1.1 2005/11/04 08:13:15 rillig Exp $ +# + +CATEGORIES= math +MASTER_SITES= ${MASTER_SITE_R_CRAN:=contrib/} + +MAINTAINER= mchittur@cs.nmsu.edu +HOMEPAGE= ${R_HOMEPAGE_BASE}/genetics.html +COMMENT= Classes and methods for handling genetic data + +R_PKGNAME= genetics +R_PKGVER= 1.0.4 + +.include "../../math/R/Makefile.extension" +.include "../../mk/bsd.pkg.mk" diff --git a/math/R-genetics/PLIST b/math/R-genetics/PLIST new file mode 100644 index 00000000000..d10a5f564a1 --- /dev/null +++ b/math/R-genetics/PLIST @@ -0,0 +1 @@ +@comment $NetBSD: PLIST,v 1.1.1.1 2005/11/04 08:13:15 rillig Exp $ diff --git a/math/R-genetics/distinfo b/math/R-genetics/distinfo new file mode 100644 index 00000000000..9b62a42370e --- /dev/null +++ b/math/R-genetics/distinfo @@ -0,0 +1,5 @@ +$NetBSD: distinfo,v 1.1.1.1 2005/11/04 08:13:15 rillig Exp $ + +SHA1 (R/genetics_1.0.4.tar.gz) = 594481ac598c18b2fa5277a025beb7573dd5191d +RMD160 (R/genetics_1.0.4.tar.gz) = 083c724a5b720d67008f1938a578cdc86f347049 +Size (R/genetics_1.0.4.tar.gz) = 212717 bytes |