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authorjlam <jlam>1999-08-26 23:52:21 +0000
committerjlam <jlam>1999-08-26 23:52:21 +0000
commit2ee7181f9c6fc2ae75822b87c36c723a74c4d807 (patch)
tree9732f2049737b014d9ec279a90cb018564fe5e5d /math/R
parentac0be63ed17fcd65b4b952f0b72345af2d6b5dc6 (diff)
downloadpkgsrc-2ee7181f9c6fc2ae75822b87c36c723a74c4d807.tar.gz
Update R to 0.64.2. Changes from 0.64.1:
NEW FEATURES o new target for R installation testing : make strict-tests. o symnum(x) now nicely codes logical x. o convolve() has a new type = c("circular", "open", "filter") argument allowing more than the only circular convolution. o par(xpd) now has three settings: FALSE (clip to plot region), TRUE (clip to figure region), or NA (clip to device region). o zapsmall(x) works for complex x. o new global variable R.version.string (for plots & reports). Deprecated version & Version for new R.version & R.Version. o R CMD Rd2dvi has builtin "Usage" help and works for multiple files. Useful for automatic reference manual of a package. (doc/manual/lib2tex is more efficient for installed packages, however). BUG FIXES o power() is now fully implemented and documented. o A couple of problems with group generic operations. o A bug which meant that it was not possible to add elements to zero length lists in the obvious way has been fixed. x <- list(); x[[1]] <- 10 x <- list(); x[["a"]] <- 11 both now work. o save.image() ignored dot-names. (esp. .First()) o lab= argument to plot() misinterpreted by axis() via ... passing o NULL labels in text() caused segfault o matrix(f,...) with f a factor now coerces to character o documentation errors for substitute and is.vector, minor fixups for trig and nlm o Background colours are set properly on X11 devices with colortype="pseudo": sometimes they were not allocated separately. o C() works (again?) for a single argument. o is.na() didn't work properly for "list" arguments. o symnum() sometimes failed with arrays of rank >= 3. o in some cases one could get nonblack color instead of black on 2nd x11() window. o influence.measures(.) $ is.influential was wrong on the cooks.distance. o printing of complex NaN/Inf was wrong as well. o printing of complex named vectors had a wrong initial space. o allow trailing space in character->numeric coercion o library() gave wrong "masked" warnings in some cases. o par(xpd) semantics were not compatible with S. o rect() output was not clipped in PostScript. o par(pin=c(width, height)) was behaving as par(pin=c(width, width)). o Non-blank separated data files didn't have their 1st field handled properly. o "aux" directory moved to "tools" to avoid difficulties on Windows. o structure() clobbered factors with missing levels. o pmatch() misbehaved on duplicate matches. o R CMD Rd2dvi <file.Rd> works again. o logical binops tried to set time series parameters before dimensions. o upped the BUFSIZE in model.c (NOT proper long-term solution). o dput(), dump() and deparse() now always use DBL_DIG (=15) digits for numeric formatting. o chull() now works for vertical borders, such as in chull(c(1,1,2),3:1).
Diffstat (limited to 'math/R')
-rw-r--r--math/R/Makefile4
-rw-r--r--math/R/files/md54
-rw-r--r--math/R/files/patch-sum8
-rw-r--r--math/R/patches/patch-ab24
-rw-r--r--math/R/patches/patch-ae14
-rw-r--r--math/R/patches/patch-af8
-rw-r--r--math/R/pkg/COMMENT2
-rw-r--r--math/R/pkg/PLIST9
8 files changed, 32 insertions, 41 deletions
diff --git a/math/R/Makefile b/math/R/Makefile
index 410343536ba..0a653ab4142 100644
--- a/math/R/Makefile
+++ b/math/R/Makefile
@@ -1,7 +1,7 @@
-# $NetBSD: Makefile,v 1.8 1999/07/13 01:20:12 jlam Exp $
+# $NetBSD: Makefile,v 1.9 1999/08/26 23:52:21 jlam Exp $
#
-DISTNAME= R-0.64.1
+DISTNAME= R-0.64.2
CATEGORIES= math
MASTER_SITES= http://lib.stat.cmu.edu/R/CRAN/src/base/ \
ftp://ftp.biostat.washington.edu/mirrors/R/CRAN/src/base/ \
diff --git a/math/R/files/md5 b/math/R/files/md5
index 88bfd60894d..150634fb816 100644
--- a/math/R/files/md5
+++ b/math/R/files/md5
@@ -1,3 +1,3 @@
-$NetBSD: md5,v 1.3 1999/05/25 23:45:06 jlam Exp $
+$NetBSD: md5,v 1.4 1999/08/26 23:52:22 jlam Exp $
-MD5 (R-0.64.1.tgz) = d6baba9bcacbdcc6a16f9d873cf95b9a
+MD5 (R-0.64.2.tgz) = a25197e6ed875628de6bb9fc6ce34fe4
diff --git a/math/R/files/patch-sum b/math/R/files/patch-sum
index 81e2b8a7f51..1697f356b42 100644
--- a/math/R/files/patch-sum
+++ b/math/R/files/patch-sum
@@ -1,8 +1,8 @@
-$NetBSD: patch-sum,v 1.1 1999/07/09 14:09:08 agc Exp $
+$NetBSD: patch-sum,v 1.2 1999/08/26 23:52:22 jlam Exp $
MD5 (patch-aa) = f11a1756dbe1f0d3499cce6919f5fce5
-MD5 (patch-ab) = f99de9f50ec2084a58398abcd99c8813
-MD5 (patch-ae) = 1bae9cbb6246480cd7b16f6be828b071
-MD5 (patch-af) = 1ef653130f4173f141f847451c0910b0
+MD5 (patch-ab) = 531d0693101c2643614367fc5e80fac3
+MD5 (patch-ae) = 15ea96c64228ee0836bac46a2a1c1c7e
+MD5 (patch-af) = 16d1f1b836f457aaa14127658fde33b8
MD5 (patch-ag) = bc27506dada75af67da6905b2bac982d
MD5 (patch-ah) = 37e5d8f9aa3a296a62150a8269415807
diff --git a/math/R/patches/patch-ab b/math/R/patches/patch-ab
index a6ff02626f6..d609f0759a4 100644
--- a/math/R/patches/patch-ab
+++ b/math/R/patches/patch-ab
@@ -1,16 +1,8 @@
-$NetBSD: patch-ab,v 1.2 1999/05/25 23:45:06 jlam Exp $
+$NetBSD: patch-ab,v 1.3 1999/08/26 23:52:22 jlam Exp $
---- configure.orig Fri May 7 06:25:40 1999
-+++ configure Tue May 25 03:01:46 1999
-@@ -812,6 +812,7 @@
- test -z "$INSTALL_PROGRAM" && INSTALL_PROGRAM='${INSTALL}'
-
- test -z "$INSTALL_DATA" && INSTALL_DATA='${INSTALL} -m 644'
-+test -z "$INSTALL_SCRIPT" && INSTALL_SCRIPT='${INSTALL} -m 755'
-
- ## Fix a bug in autoconf---the path of the install shell script is
- ## not cached. Could also use an absolute path in AC_CONFIG_AUX_DIR().
-@@ -3619,9 +3620,10 @@
+--- configure.orig Fri Jul 2 08:23:14 1999
++++ configure Thu Aug 26 18:32:19 1999
+@@ -3748,9 +3748,10 @@
;;
*netbsd*)
if ${CPP} - -dM < /dev/null | grep -q __ELF__; then
@@ -22,11 +14,3 @@ $NetBSD: patch-ab,v 1.2 1999/05/25 23:45:06 jlam Exp $
SHLIBLDFLAGS="-Bshareable"
fi
;;
-@@ -4746,6 +4748,7 @@
- s%@config_opts@%$config_opts%g
- s%@INSTALL_PROGRAM@%$INSTALL_PROGRAM%g
- s%@INSTALL_DATA@%$INSTALL_DATA%g
-+s%@INSTALL_SCRIPT@%$INSTALL_SCRIPT%g
- s%@LN_S@%$LN_S%g
- s%@RANLIB@%$RANLIB%g
- s%@YACC@%$YACC%g
diff --git a/math/R/patches/patch-ae b/math/R/patches/patch-ae
index 204d8e450a4..b4bc04a7333 100644
--- a/math/R/patches/patch-ae
+++ b/math/R/patches/patch-ae
@@ -1,8 +1,8 @@
-$NetBSD: patch-ae,v 1.1 1999/05/25 23:51:12 jlam Exp $
+$NetBSD: patch-ae,v 1.2 1999/08/26 23:52:22 jlam Exp $
---- Makefile.in.orig Fri Apr 16 09:25:20 1999
-+++ Makefile.in Tue May 25 02:48:46 1999
-@@ -49,15 +49,19 @@
+--- Makefile.in.orig Mon Jun 28 09:46:08 1999
++++ Makefile.in Thu Aug 26 18:41:20 1999
+@@ -49,16 +49,20 @@
$(INSTALL_DATA) $${f} $(rhome); \
done)
@echo "Installing executables ..."
@@ -14,10 +14,10 @@ $NetBSD: patch-ae,v 1.1 1999/05/25 23:51:12 jlam Exp $
@cat bin/R | sed "s@RHOME=.*@RHOME=$(rhome)@" > $(rhome)/bin/R
@cat bin/R | sed "s@RHOME=.*@RHOME=$(rhome)@" > $(bindir)/R
@chmod 755 $(bindir)/R $(rhome)/bin/R
-- @for f in `ls bin/* | grep -v '^bin/\(R\|R.binary\)\**$$'`; do \
+ @for f in `ls bin/* | grep -v '^bin/R\**$$' \
++ | grep -v '^bin/R.gnome\**$$' \
+ | grep -v '^bin/R.binary\**$$'`; do \
- $(INSTALL) $${f} $(rhome)/bin; \
-+ @for f in \
-+ `ls bin/* | grep -v '^bin/\(R\|R.binary\|R.gnome\)\**$$'`; do \
+ $(INSTALL_SCRIPT) $${f} $(rhome)/bin; \
done
@for f in Rd2txt Rdconv Rdindex Sd2Rd; do \
diff --git a/math/R/patches/patch-af b/math/R/patches/patch-af
index 3a1fb0438c5..6b3b784ead3 100644
--- a/math/R/patches/patch-af
+++ b/math/R/patches/patch-af
@@ -1,7 +1,7 @@
-$NetBSD: patch-af,v 1.1 1999/05/25 23:51:12 jlam Exp $
+$NetBSD: patch-af,v 1.2 1999/08/26 23:52:22 jlam Exp $
---- src/scripts/R.sh.in.orig Thu May 6 04:32:27 1999
-+++ src/scripts/R.sh.in Mon May 24 19:26:06 1999
+--- src/scripts/R.sh.in.orig Wed May 12 03:12:32 1999
++++ src/scripts/R.sh.in Thu Aug 26 18:44:22 1999
@@ -47,7 +47,7 @@
echo "*** (maybe use \`run ${args}' from *inside* ${deb}"
echo ""
@@ -11,7 +11,7 @@ $NetBSD: patch-af,v 1.1 1999/05/25 23:51:12 jlam Exp $
--no-environ)
USE_R_ENVIRON=false ;;
--vanilla)
-@@ -106,7 +106,7 @@
+@@ -107,7 +107,7 @@
if ${USE_R_ENVIRON}; then
[ -r ${HOME}/.Renviron ] && . ${HOME}/.Renviron
fi
diff --git a/math/R/pkg/COMMENT b/math/R/pkg/COMMENT
index 83deccde652..b588a8e16cf 100644
--- a/math/R/pkg/COMMENT
+++ b/math/R/pkg/COMMENT
@@ -1 +1 @@
-a language for data analysis and graphics.
+a statistical language for data analysis and graphics.
diff --git a/math/R/pkg/PLIST b/math/R/pkg/PLIST
index 23c00c0149b..d7361e77c9b 100644
--- a/math/R/pkg/PLIST
+++ b/math/R/pkg/PLIST
@@ -1,4 +1,4 @@
-@comment $NetBSD: PLIST,v 1.3 1999/05/25 23:45:06 jlam Exp $
+@comment $NetBSD: PLIST,v 1.4 1999/08/26 23:52:22 jlam Exp $
bin/R
bin/R.binary
bin/Rd2txt
@@ -238,6 +238,8 @@ share/R/library/base/R-ex/complex.R
share/R/library/base/R-ex/conflicts.R
share/R/library/base/R-ex/consume.R
share/R/library/base/R-ex/contour.R
+share/R/library/base/R-ex/contrast.R
+share/R/library/base/R-ex/contrasts.R
share/R/library/base/R-ex/convolve.R
share/R/library/base/R-ex/coplot.R
share/R/library/base/R-ex/count.fields.R
@@ -292,6 +294,7 @@ share/R/library/base/R-ex/file.R
share/R/library/base/R-ex/file.show.R
share/R/library/base/R-ex/filled.contour.R
share/R/library/base/R-ex/fivenum.R
+share/R/library/base/R-ex/fix.R
share/R/library/base/R-ex/formals.R
share/R/library/base/R-ex/format.R
share/R/library/base/R-ex/format.info.R
@@ -416,6 +419,7 @@ share/R/library/base/R-ex/poly.R
share/R/library/base/R-ex/polygon.R
share/R/library/base/R-ex/polyroot.R
share/R/library/base/R-ex/postscript.R
+share/R/library/base/R-ex/power.R
share/R/library/base/R-ex/ppoints.R
share/R/library/base/R-ex/predict.R
share/R/library/base/R-ex/predict.glm.R
@@ -921,6 +925,7 @@ share/R/library/base/help/poly
share/R/library/base/help/polygon
share/R/library/base/help/polyroot
share/R/library/base/help/postscript
+share/R/library/base/help/power
share/R/library/base/help/ppoints
share/R/library/base/help/precip
share/R/library/base/help/predict
@@ -1399,6 +1404,7 @@ share/R/library/base/html/poly.html
share/R/library/base/html/polygon.html
share/R/library/base/html/polyroot.html
share/R/library/base/html/postscript.html
+share/R/library/base/html/power.html
share/R/library/base/html/ppoints.html
share/R/library/base/html/precip.html
share/R/library/base/html/predict.glm.html
@@ -1876,6 +1882,7 @@ share/R/library/base/latex/poly.tex
share/R/library/base/latex/polygon.tex
share/R/library/base/latex/polyroot.tex
share/R/library/base/latex/postscript.tex
+share/R/library/base/latex/power.tex
share/R/library/base/latex/ppoints.tex
share/R/library/base/latex/precip.tex
share/R/library/base/latex/predict.glm.tex