diff options
author | minskim <minskim@pkgsrc.org> | 2020-02-16 03:02:15 +0000 |
---|---|---|
committer | minskim <minskim@pkgsrc.org> | 2020-02-16 03:02:15 +0000 |
commit | 1ce8da13c3c3d5ffaf186ba6bae384ca716ceed4 (patch) | |
tree | e37a7472c84ac6dc75edb8fa59116b48ce7980fd /math | |
parent | 94597748d4f6edbf56c80d19086a7738d4f99595 (diff) | |
download | pkgsrc-1ce8da13c3c3d5ffaf186ba6bae384ca716ceed4.tar.gz |
math/py-arviz: Update to 0.6.1
Highlights:
- Initial bokeh support.
- Fully support numpyro
- log_likelihood and observed data from pyro
- ArviZ.jl
- improve rcparams
- fix az.concat functionality
- distplot docstring plotting example
Diffstat (limited to 'math')
-rw-r--r-- | math/py-arviz/Makefile | 9 | ||||
-rw-r--r-- | math/py-arviz/PLIST | 146 | ||||
-rw-r--r-- | math/py-arviz/distinfo | 10 |
3 files changed, 152 insertions, 13 deletions
diff --git a/math/py-arviz/Makefile b/math/py-arviz/Makefile index 3c4b6b003e5..f92838dadd7 100644 --- a/math/py-arviz/Makefile +++ b/math/py-arviz/Makefile @@ -1,23 +1,24 @@ -# $NetBSD: Makefile,v 1.2 2020/01/18 23:32:52 rillig Exp $ +# $NetBSD: Makefile,v 1.3 2020/02/16 03:02:15 minskim Exp $ -DISTNAME= arviz-0.5.1 +DISTNAME= arviz-0.6.1 PKGNAME= ${PYPKGPREFIX}-${DISTNAME} CATEGORIES= math MASTER_SITES= ${MASTER_SITE_PYPI:=a/arviz/} MAINTAINER= minskim@NetBSD.org -HOMEPAGE= https://github.com/arviz-devs/arviz +HOMEPAGE= https://arviz-devs.github.io/arviz/ COMMENT= Exploratory analysis of Bayesian models LICENSE= apache-2.0 DEPENDS+= ${PYPKGPREFIX}-matplotlib>=3.0:../../graphics/py-matplotlib DEPENDS+= ${PYPKGPREFIX}-netCDF4-[0-9]*:../../math/py-netCDF4 DEPENDS+= ${PYPKGPREFIX}-numpy>=1.12:../../math/py-numpy +DEPENDS+= ${PYPKGPREFIX}-packaging-[0-9]*:../../devel/py-packaging DEPENDS+= ${PYPKGPREFIX}-pandas>=0.23:../../math/py-pandas DEPENDS+= ${PYPKGPREFIX}-scipy>=0.19:../../math/py-scipy DEPENDS+= ${PYPKGPREFIX}-xarray>=0.11:../../math/py-xarray -PYTHON_VERSIONS_INCOMPATIBLE= 27 # py-pandas +PYTHON_VERSIONS_INCOMPATIBLE= 27 USE_LANGUAGES= # none diff --git a/math/py-arviz/PLIST b/math/py-arviz/PLIST index 78c09ca17b2..6af0de18d5f 100644 --- a/math/py-arviz/PLIST +++ b/math/py-arviz/PLIST @@ -1,4 +1,4 @@ -@comment $NetBSD: PLIST,v 1.1 2019/11/25 04:08:33 minskim Exp $ +@comment $NetBSD: PLIST,v 1.2 2020/02/16 03:02:15 minskim Exp $ ${PYSITELIB}/${EGG_INFODIR}/PKG-INFO ${PYSITELIB}/${EGG_INFODIR}/SOURCES.txt ${PYSITELIB}/${EGG_INFODIR}/dependency_links.txt @@ -60,6 +60,141 @@ ${PYSITELIB}/arviz/plots/__init__.pyo ${PYSITELIB}/arviz/plots/autocorrplot.py ${PYSITELIB}/arviz/plots/autocorrplot.pyc ${PYSITELIB}/arviz/plots/autocorrplot.pyo +${PYSITELIB}/arviz/plots/backends/__init__.py +${PYSITELIB}/arviz/plots/backends/__init__.pyc +${PYSITELIB}/arviz/plots/backends/__init__.pyo +${PYSITELIB}/arviz/plots/backends/bokeh/__init__.py +${PYSITELIB}/arviz/plots/backends/bokeh/__init__.pyc +${PYSITELIB}/arviz/plots/backends/bokeh/__init__.pyo +${PYSITELIB}/arviz/plots/backends/bokeh/autocorrplot.py +${PYSITELIB}/arviz/plots/backends/bokeh/autocorrplot.pyc +${PYSITELIB}/arviz/plots/backends/bokeh/autocorrplot.pyo +${PYSITELIB}/arviz/plots/backends/bokeh/compareplot.py +${PYSITELIB}/arviz/plots/backends/bokeh/compareplot.pyc +${PYSITELIB}/arviz/plots/backends/bokeh/compareplot.pyo +${PYSITELIB}/arviz/plots/backends/bokeh/densityplot.py +${PYSITELIB}/arviz/plots/backends/bokeh/densityplot.pyc +${PYSITELIB}/arviz/plots/backends/bokeh/densityplot.pyo +${PYSITELIB}/arviz/plots/backends/bokeh/distplot.py +${PYSITELIB}/arviz/plots/backends/bokeh/distplot.pyc +${PYSITELIB}/arviz/plots/backends/bokeh/distplot.pyo +${PYSITELIB}/arviz/plots/backends/bokeh/elpdplot.py +${PYSITELIB}/arviz/plots/backends/bokeh/elpdplot.pyc +${PYSITELIB}/arviz/plots/backends/bokeh/elpdplot.pyo +${PYSITELIB}/arviz/plots/backends/bokeh/energyplot.py +${PYSITELIB}/arviz/plots/backends/bokeh/energyplot.pyc +${PYSITELIB}/arviz/plots/backends/bokeh/energyplot.pyo +${PYSITELIB}/arviz/plots/backends/bokeh/essplot.py +${PYSITELIB}/arviz/plots/backends/bokeh/essplot.pyc +${PYSITELIB}/arviz/plots/backends/bokeh/essplot.pyo +${PYSITELIB}/arviz/plots/backends/bokeh/forestplot.py +${PYSITELIB}/arviz/plots/backends/bokeh/forestplot.pyc +${PYSITELIB}/arviz/plots/backends/bokeh/forestplot.pyo +${PYSITELIB}/arviz/plots/backends/bokeh/hpdplot.py +${PYSITELIB}/arviz/plots/backends/bokeh/hpdplot.pyc +${PYSITELIB}/arviz/plots/backends/bokeh/hpdplot.pyo +${PYSITELIB}/arviz/plots/backends/bokeh/jointplot.py +${PYSITELIB}/arviz/plots/backends/bokeh/jointplot.pyc +${PYSITELIB}/arviz/plots/backends/bokeh/jointplot.pyo +${PYSITELIB}/arviz/plots/backends/bokeh/kdeplot.py +${PYSITELIB}/arviz/plots/backends/bokeh/kdeplot.pyc +${PYSITELIB}/arviz/plots/backends/bokeh/kdeplot.pyo +${PYSITELIB}/arviz/plots/backends/bokeh/khatplot.py +${PYSITELIB}/arviz/plots/backends/bokeh/khatplot.pyc +${PYSITELIB}/arviz/plots/backends/bokeh/khatplot.pyo +${PYSITELIB}/arviz/plots/backends/bokeh/loopitplot.py +${PYSITELIB}/arviz/plots/backends/bokeh/loopitplot.pyc +${PYSITELIB}/arviz/plots/backends/bokeh/loopitplot.pyo +${PYSITELIB}/arviz/plots/backends/bokeh/mcseplot.py +${PYSITELIB}/arviz/plots/backends/bokeh/mcseplot.pyc +${PYSITELIB}/arviz/plots/backends/bokeh/mcseplot.pyo +${PYSITELIB}/arviz/plots/backends/bokeh/pairplot.py +${PYSITELIB}/arviz/plots/backends/bokeh/pairplot.pyc +${PYSITELIB}/arviz/plots/backends/bokeh/pairplot.pyo +${PYSITELIB}/arviz/plots/backends/bokeh/parallelplot.py +${PYSITELIB}/arviz/plots/backends/bokeh/parallelplot.pyc +${PYSITELIB}/arviz/plots/backends/bokeh/parallelplot.pyo +${PYSITELIB}/arviz/plots/backends/bokeh/posteriorplot.py +${PYSITELIB}/arviz/plots/backends/bokeh/posteriorplot.pyc +${PYSITELIB}/arviz/plots/backends/bokeh/posteriorplot.pyo +${PYSITELIB}/arviz/plots/backends/bokeh/ppcplot.py +${PYSITELIB}/arviz/plots/backends/bokeh/ppcplot.pyc +${PYSITELIB}/arviz/plots/backends/bokeh/ppcplot.pyo +${PYSITELIB}/arviz/plots/backends/bokeh/rankplot.py +${PYSITELIB}/arviz/plots/backends/bokeh/rankplot.pyc +${PYSITELIB}/arviz/plots/backends/bokeh/rankplot.pyo +${PYSITELIB}/arviz/plots/backends/bokeh/traceplot.py +${PYSITELIB}/arviz/plots/backends/bokeh/traceplot.pyc +${PYSITELIB}/arviz/plots/backends/bokeh/traceplot.pyo +${PYSITELIB}/arviz/plots/backends/bokeh/violinplot.py +${PYSITELIB}/arviz/plots/backends/bokeh/violinplot.pyc +${PYSITELIB}/arviz/plots/backends/bokeh/violinplot.pyo +${PYSITELIB}/arviz/plots/backends/matplotlib/__init__.py +${PYSITELIB}/arviz/plots/backends/matplotlib/__init__.pyc +${PYSITELIB}/arviz/plots/backends/matplotlib/__init__.pyo +${PYSITELIB}/arviz/plots/backends/matplotlib/autocorrplot.py +${PYSITELIB}/arviz/plots/backends/matplotlib/autocorrplot.pyc +${PYSITELIB}/arviz/plots/backends/matplotlib/autocorrplot.pyo +${PYSITELIB}/arviz/plots/backends/matplotlib/compareplot.py +${PYSITELIB}/arviz/plots/backends/matplotlib/compareplot.pyc +${PYSITELIB}/arviz/plots/backends/matplotlib/compareplot.pyo +${PYSITELIB}/arviz/plots/backends/matplotlib/densityplot.py +${PYSITELIB}/arviz/plots/backends/matplotlib/densityplot.pyc +${PYSITELIB}/arviz/plots/backends/matplotlib/densityplot.pyo +${PYSITELIB}/arviz/plots/backends/matplotlib/distplot.py +${PYSITELIB}/arviz/plots/backends/matplotlib/distplot.pyc +${PYSITELIB}/arviz/plots/backends/matplotlib/distplot.pyo +${PYSITELIB}/arviz/plots/backends/matplotlib/elpdplot.py +${PYSITELIB}/arviz/plots/backends/matplotlib/elpdplot.pyc +${PYSITELIB}/arviz/plots/backends/matplotlib/elpdplot.pyo +${PYSITELIB}/arviz/plots/backends/matplotlib/energyplot.py +${PYSITELIB}/arviz/plots/backends/matplotlib/energyplot.pyc +${PYSITELIB}/arviz/plots/backends/matplotlib/energyplot.pyo +${PYSITELIB}/arviz/plots/backends/matplotlib/essplot.py +${PYSITELIB}/arviz/plots/backends/matplotlib/essplot.pyc +${PYSITELIB}/arviz/plots/backends/matplotlib/essplot.pyo +${PYSITELIB}/arviz/plots/backends/matplotlib/forestplot.py +${PYSITELIB}/arviz/plots/backends/matplotlib/forestplot.pyc +${PYSITELIB}/arviz/plots/backends/matplotlib/forestplot.pyo +${PYSITELIB}/arviz/plots/backends/matplotlib/hpdplot.py +${PYSITELIB}/arviz/plots/backends/matplotlib/hpdplot.pyc +${PYSITELIB}/arviz/plots/backends/matplotlib/hpdplot.pyo +${PYSITELIB}/arviz/plots/backends/matplotlib/jointplot.py +${PYSITELIB}/arviz/plots/backends/matplotlib/jointplot.pyc +${PYSITELIB}/arviz/plots/backends/matplotlib/jointplot.pyo +${PYSITELIB}/arviz/plots/backends/matplotlib/kdeplot.py +${PYSITELIB}/arviz/plots/backends/matplotlib/kdeplot.pyc +${PYSITELIB}/arviz/plots/backends/matplotlib/kdeplot.pyo +${PYSITELIB}/arviz/plots/backends/matplotlib/khatplot.py +${PYSITELIB}/arviz/plots/backends/matplotlib/khatplot.pyc +${PYSITELIB}/arviz/plots/backends/matplotlib/khatplot.pyo +${PYSITELIB}/arviz/plots/backends/matplotlib/loopitplot.py +${PYSITELIB}/arviz/plots/backends/matplotlib/loopitplot.pyc +${PYSITELIB}/arviz/plots/backends/matplotlib/loopitplot.pyo +${PYSITELIB}/arviz/plots/backends/matplotlib/mcseplot.py +${PYSITELIB}/arviz/plots/backends/matplotlib/mcseplot.pyc +${PYSITELIB}/arviz/plots/backends/matplotlib/mcseplot.pyo +${PYSITELIB}/arviz/plots/backends/matplotlib/pairplot.py +${PYSITELIB}/arviz/plots/backends/matplotlib/pairplot.pyc +${PYSITELIB}/arviz/plots/backends/matplotlib/pairplot.pyo +${PYSITELIB}/arviz/plots/backends/matplotlib/parallelplot.py +${PYSITELIB}/arviz/plots/backends/matplotlib/parallelplot.pyc +${PYSITELIB}/arviz/plots/backends/matplotlib/parallelplot.pyo +${PYSITELIB}/arviz/plots/backends/matplotlib/posteriorplot.py +${PYSITELIB}/arviz/plots/backends/matplotlib/posteriorplot.pyc +${PYSITELIB}/arviz/plots/backends/matplotlib/posteriorplot.pyo +${PYSITELIB}/arviz/plots/backends/matplotlib/ppcplot.py +${PYSITELIB}/arviz/plots/backends/matplotlib/ppcplot.pyc +${PYSITELIB}/arviz/plots/backends/matplotlib/ppcplot.pyo +${PYSITELIB}/arviz/plots/backends/matplotlib/rankplot.py +${PYSITELIB}/arviz/plots/backends/matplotlib/rankplot.pyc +${PYSITELIB}/arviz/plots/backends/matplotlib/rankplot.pyo +${PYSITELIB}/arviz/plots/backends/matplotlib/traceplot.py +${PYSITELIB}/arviz/plots/backends/matplotlib/traceplot.pyc +${PYSITELIB}/arviz/plots/backends/matplotlib/traceplot.pyo +${PYSITELIB}/arviz/plots/backends/matplotlib/violinplot.py +${PYSITELIB}/arviz/plots/backends/matplotlib/violinplot.pyc +${PYSITELIB}/arviz/plots/backends/matplotlib/violinplot.pyo ${PYSITELIB}/arviz/plots/compareplot.py ${PYSITELIB}/arviz/plots/compareplot.pyc ${PYSITELIB}/arviz/plots/compareplot.pyo @@ -184,9 +319,12 @@ ${PYSITELIB}/arviz/tests/test_diagnostics.pyo ${PYSITELIB}/arviz/tests/test_plot_utils.py ${PYSITELIB}/arviz/tests/test_plot_utils.pyc ${PYSITELIB}/arviz/tests/test_plot_utils.pyo -${PYSITELIB}/arviz/tests/test_plots.py -${PYSITELIB}/arviz/tests/test_plots.pyc -${PYSITELIB}/arviz/tests/test_plots.pyo +${PYSITELIB}/arviz/tests/test_plots_bokeh.py +${PYSITELIB}/arviz/tests/test_plots_bokeh.pyc +${PYSITELIB}/arviz/tests/test_plots_bokeh.pyo +${PYSITELIB}/arviz/tests/test_plots_matplotlib.py +${PYSITELIB}/arviz/tests/test_plots_matplotlib.pyc +${PYSITELIB}/arviz/tests/test_plots_matplotlib.pyo ${PYSITELIB}/arviz/tests/test_rcparams.py ${PYSITELIB}/arviz/tests/test_rcparams.pyc ${PYSITELIB}/arviz/tests/test_rcparams.pyo diff --git a/math/py-arviz/distinfo b/math/py-arviz/distinfo index 14a308091c3..cbccbe8f5e6 100644 --- a/math/py-arviz/distinfo +++ b/math/py-arviz/distinfo @@ -1,6 +1,6 @@ -$NetBSD: distinfo,v 1.1 2019/11/25 04:08:33 minskim Exp $ +$NetBSD: distinfo,v 1.2 2020/02/16 03:02:15 minskim Exp $ -SHA1 (arviz-0.5.1.tar.gz) = dbf43b87e99854f9f8fe0f49bc9a474510153cb4 -RMD160 (arviz-0.5.1.tar.gz) = 47fe8fb776c1b943a81c559f7b60caef9f52680b -SHA512 (arviz-0.5.1.tar.gz) = 79179870fc4529af495ff9f567222be3116bdeb85d71e5042a655374a4c07079af864d9b09e2b5f361356d825dbec956146d5201ff57d0df8b2d3c29dda42f33 -Size (arviz-0.5.1.tar.gz) = 1321172 bytes +SHA1 (arviz-0.6.1.tar.gz) = b97d3e8552b652ca0687c000c8fe695730149870 +RMD160 (arviz-0.6.1.tar.gz) = fae4cc2ba4b07766cb93d648a4d07a6c83540e61 +SHA512 (arviz-0.6.1.tar.gz) = af13aea66ec2fe7ee62168d9ec7d72e221b658bbdfe44e13f7c8ddaab5d48792fe059d15be1806d61eaf4d223659a6e4adec1786396db60fa26dec7fedcbf436 +Size (arviz-0.6.1.tar.gz) = 1363493 bytes |