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authorrillig <rillig>2005-11-04 08:15:19 +0000
committerrillig <rillig>2005-11-04 08:15:19 +0000
commit265de28f3cec6455b1d50014e903634ac5a5b5ad (patch)
tree0335da1114eb283fe811b0f522cb8e185d2a1266 /math
parent9edcd116845c3cd302872a4321ec804d12ff3b43 (diff)
downloadpkgsrc-265de28f3cec6455b1d50014e903634ac5a5b5ad.tar.gz
Imported R-hwde from pkgsrc-wip.
Models and tests for departure from Hardy-Weinberg equilibrium and independence between loci. Fits models for genotypic disequilibria, as described in Huttley and Wilson (2000), Weir (1996) and Weir and Wilson (1986). Contrast terms are available that account for first order interactions between loci.
Diffstat (limited to 'math')
-rw-r--r--math/R-hwde/DESCR6
-rw-r--r--math/R-hwde/Makefile15
-rw-r--r--math/R-hwde/PLIST1
-rw-r--r--math/R-hwde/distinfo5
4 files changed, 27 insertions, 0 deletions
diff --git a/math/R-hwde/DESCR b/math/R-hwde/DESCR
new file mode 100644
index 00000000000..95119354dcb
--- /dev/null
+++ b/math/R-hwde/DESCR
@@ -0,0 +1,6 @@
+Models and tests for departure from Hardy-Weinberg equilibrium and
+independence between loci.
+
+Fits models for genotypic disequilibria, as described in Huttley and
+Wilson (2000), Weir (1996) and Weir and Wilson (1986). Contrast terms
+are available that account for first order interactions between loci.
diff --git a/math/R-hwde/Makefile b/math/R-hwde/Makefile
new file mode 100644
index 00000000000..f18ed233bba
--- /dev/null
+++ b/math/R-hwde/Makefile
@@ -0,0 +1,15 @@
+# $NetBSD: Makefile,v 1.1.1.1 2005/11/04 08:15:19 rillig Exp $
+#
+
+CATEGORIES= math
+MASTER_SITES= ${MASTER_SITE_R_CRAN:=contrib/}
+
+MAINTAINER= mchittur@cs.nmsu.edu
+HOMEPAGE= ${R_HOMEPAGE_BASE}/hwde.html
+COMMENT= Models and tests for departure from Hardy-Weinberg equilibrium
+
+R_PKGNAME= hwde
+R_PKGVER= 0.3
+
+.include "../../math/R/Makefile.extension"
+.include "../../mk/bsd.pkg.mk"
diff --git a/math/R-hwde/PLIST b/math/R-hwde/PLIST
new file mode 100644
index 00000000000..f3b14d383bd
--- /dev/null
+++ b/math/R-hwde/PLIST
@@ -0,0 +1 @@
+@comment $NetBSD: PLIST,v 1.1.1.1 2005/11/04 08:15:19 rillig Exp $
diff --git a/math/R-hwde/distinfo b/math/R-hwde/distinfo
new file mode 100644
index 00000000000..a4f696a4fea
--- /dev/null
+++ b/math/R-hwde/distinfo
@@ -0,0 +1,5 @@
+$NetBSD: distinfo,v 1.1.1.1 2005/11/04 08:15:19 rillig Exp $
+
+SHA1 (R/hwde_0.3.tar.gz) = 18b1c7cb865b807b73db88730f871e4e853b8d53
+RMD160 (R/hwde_0.3.tar.gz) = 3b62613a43f44e4d088473590fd58657b2b08582
+Size (R/hwde_0.3.tar.gz) = 121416 bytes