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| author | minskim <minskim> | 2004-12-01 04:01:09 +0000 |
|---|---|---|
| committer | minskim <minskim> | 2004-12-01 04:01:09 +0000 |
| commit | b6e766edf99d3d0c180728ed5049dae69cffe53d (patch) | |
| tree | fbdf402073064d4caa45d5f747b25f389c9b3745 /x11/gnome-mag | |
| parent | 13cbb08647975e656fca972d1c7d0c0867a5d75c (diff) | |
| download | pkgsrc-b6e766edf99d3d0c180728ed5049dae69cffe53d.tar.gz | |
Update hmmer to 2.3.2. Patch provided by David Price in PR pkg/28483.
While here, enable pkgviews installation.
Changes:
-:- hmmsearch intermittently failed on Swissprot searches, on some
platforms (reports on AMD/Linux; Mac OS/X). (#h25)
-:- hmmpfam memory allocation strategy did not guarantee RAMLIMIT,
and could explode to very large allocations when searching
with large sequences. (#h26)
-:- technical improvements in handing dsq's (digitized sequences);
"bug" has no visible effects, except when compiling on
different platforms. (#h27)
-:- typo fix in P7Forward() recursion; typo may have had minor
effect on calculated scores. (#h28)
-:- hmmalign now includes --outformat and --oneline option for
specifying different output alignment formats than the default
Stockholm.
Diffstat (limited to 'x11/gnome-mag')
0 files changed, 0 insertions, 0 deletions