diff options
| -rw-r--r-- | math/py-pymc3/Makefile | 19 | ||||
| -rw-r--r-- | math/py-pymc3/PLIST | 63 | ||||
| -rw-r--r-- | math/py-pymc3/distinfo | 10 |
3 files changed, 27 insertions, 65 deletions
diff --git a/math/py-pymc3/Makefile b/math/py-pymc3/Makefile index 30252be7199..d55e9b840d5 100644 --- a/math/py-pymc3/Makefile +++ b/math/py-pymc3/Makefile @@ -1,8 +1,8 @@ -# $NetBSD: Makefile,v 1.2 2018/07/23 01:37:54 minskim Exp $ +# $NetBSD: Makefile,v 1.3 2019/06/16 19:17:23 adam Exp $ -DISTNAME= pymc3-3.5 +DISTNAME= pymc3-3.7 PKGNAME= ${PYPKGPREFIX}-${DISTNAME} -CATEGORIES= math +CATEGORIES= math python MASTER_SITES= ${MASTER_SITE_PYPI:=p/pymc3/} MAINTAINER= minskim@NetBSD.org @@ -10,21 +10,16 @@ HOMEPAGE= https://github.com/pymc-devs/pymc3 COMMENT= Bayesian modeling and probabilistic machine learning LICENSE= apache-2.0 +DEPENDS+= ${PYPKGPREFIX}-Theano>=1.0.0:../../math/py-Theano DEPENDS+= ${PYPKGPREFIX}-h5py>=2.7.0:../../devel/py-h5py -DEPENDS+= ${PYPKGPREFIX}-joblib>=0.9:../../devel/py-joblib DEPENDS+= ${PYPKGPREFIX}-matplotlib>=1.5.0:../../graphics/py-matplotlib +DEPENDS+= ${PYPKGPREFIX}-numpy>=1.13.0:../../math/py-numpy DEPENDS+= ${PYPKGPREFIX}-pandas>=0.18.0:../../math/py-pandas DEPENDS+= ${PYPKGPREFIX}-patsy>=0.4.0:../../math/py-patsy -DEPENDS+= ${PYPKGPREFIX}-six>=1.10.0:../../lang/py-six -DEPENDS+= ${PYPKGPREFIX}-Theano>=1.0.0:../../math/py-Theano +DEPENDS+= ${PYPKGPREFIX}-scipy>=0.18.1:../../math/py-scipy DEPENDS+= ${PYPKGPREFIX}-tqdm>=4.8.4:../../misc/py-tqdm -.include "../../lang/python/pyversion.mk" -.if "${PYPKGPREFIX}" == "py27" -DEPENDS+= ${PYPKGPREFIX}-enum34>=1.1.6:../../devel/py-enum34 -.endif +PYTHON_VERSIONS_INCOMPATIBLE= 27 # py-matplotlib, py-scipy .include "../../lang/python/egg.mk" -BUILDLINK_API_DEPENDS.py-numpy+= ${PYPKGPREFIX}-numpy>=1.13.0 -.include "../../math/py-numpy/buildlink3.mk" .include "../../mk/bsd.pkg.mk" diff --git a/math/py-pymc3/PLIST b/math/py-pymc3/PLIST index ba019176319..46271410d5f 100644 --- a/math/py-pymc3/PLIST +++ b/math/py-pymc3/PLIST @@ -1,4 +1,4 @@ -@comment $NetBSD: PLIST,v 1.2 2018/07/23 01:37:54 minskim Exp $ +@comment $NetBSD: PLIST,v 1.3 2019/06/16 19:17:23 adam Exp $ ${PYSITELIB}/${EGG_INFODIR}/PKG-INFO ${PYSITELIB}/${EGG_INFODIR}/SOURCES.txt ${PYSITELIB}/${EGG_INFODIR}/dependency_links.txt @@ -22,9 +22,6 @@ ${PYSITELIB}/pymc3/backends/ndarray.pyo ${PYSITELIB}/pymc3/backends/report.py ${PYSITELIB}/pymc3/backends/report.pyc ${PYSITELIB}/pymc3/backends/report.pyo -${PYSITELIB}/pymc3/backends/smc_text.py -${PYSITELIB}/pymc3/backends/smc_text.pyc -${PYSITELIB}/pymc3/backends/smc_text.pyo ${PYSITELIB}/pymc3/backends/sqlite.py ${PYSITELIB}/pymc3/backends/sqlite.pyc ${PYSITELIB}/pymc3/backends/sqlite.pyo @@ -67,6 +64,9 @@ ${PYSITELIB}/pymc3/distributions/mixture.pyo ${PYSITELIB}/pymc3/distributions/multivariate.py ${PYSITELIB}/pymc3/distributions/multivariate.pyc ${PYSITELIB}/pymc3/distributions/multivariate.pyo +${PYSITELIB}/pymc3/distributions/shape_utils.py +${PYSITELIB}/pymc3/distributions/shape_utils.pyc +${PYSITELIB}/pymc3/distributions/shape_utils.pyo ${PYSITELIB}/pymc3/distributions/special.py ${PYSITELIB}/pymc3/distributions/special.pyc ${PYSITELIB}/pymc3/distributions/special.pyo @@ -100,20 +100,17 @@ ${PYSITELIB}/pymc3/examples/custom_dists.pyo ${PYSITELIB}/pymc3/examples/data/Guber1999data.txt ${PYSITELIB}/pymc3/examples/data/HtWt.csv ${PYSITELIB}/pymc3/examples/data/SP500.csv +${PYSITELIB}/pymc3/examples/data/babies.csv ${PYSITELIB}/pymc3/examples/data/cty.dat ${PYSITELIB}/pymc3/examples/data/efron-morris-75-data.tsv ${PYSITELIB}/pymc3/examples/data/extrahard_MC_500_5_4.npz.npy ${PYSITELIB}/pymc3/examples/data/extrahard_MC_500_5_4_reference_classes.npy ${PYSITELIB}/pymc3/examples/data/mastectomy.csv +${PYSITELIB}/pymc3/examples/data/merged_ice_core_yearly.csv ${PYSITELIB}/pymc3/examples/data/milk.csv ${PYSITELIB}/pymc3/examples/data/monthly_in_situ_co2_mlo.csv ${PYSITELIB}/pymc3/examples/data/old_faithful.csv ${PYSITELIB}/pymc3/examples/data/pancreatitis.csv -${PYSITELIB}/pymc3/examples/data/pmf/6bb8d06c69c0666e6da14c094d4320d115f1ffc8/shapes.json -${PYSITELIB}/pymc3/examples/data/pmf/6bb8d06c69c0666e6da14c094d4320d115f1ffc8/test.txt -${PYSITELIB}/pymc3/examples/data/pmf/6bb8d06c69c0666e6da14c094d4320d115f1ffc8/train.txt -${PYSITELIB}/pymc3/examples/data/pmf/jester-dataset-v1-dense-first-1000.csv -${PYSITELIB}/pymc3/examples/data/pmf/jokes.json ${PYSITELIB}/pymc3/examples/data/radon.csv ${PYSITELIB}/pymc3/examples/data/rugby.csv ${PYSITELIB}/pymc3/examples/data/srrs2.dat @@ -157,9 +154,6 @@ ${PYSITELIB}/pymc3/examples/simpletest.pyo ${PYSITELIB}/pymc3/exceptions.py ${PYSITELIB}/pymc3/exceptions.pyc ${PYSITELIB}/pymc3/exceptions.pyo -${PYSITELIB}/pymc3/external/__init__.py -${PYSITELIB}/pymc3/external/__init__.pyc -${PYSITELIB}/pymc3/external/__init__.pyo ${PYSITELIB}/pymc3/glm/__init__.py ${PYSITELIB}/pymc3/glm/__init__.pyc ${PYSITELIB}/pymc3/glm/__init__.pyo @@ -205,39 +199,9 @@ ${PYSITELIB}/pymc3/parallel_sampling.pyo ${PYSITELIB}/pymc3/plots/__init__.py ${PYSITELIB}/pymc3/plots/__init__.pyc ${PYSITELIB}/pymc3/plots/__init__.pyo -${PYSITELIB}/pymc3/plots/artists.py -${PYSITELIB}/pymc3/plots/artists.pyc -${PYSITELIB}/pymc3/plots/artists.pyo -${PYSITELIB}/pymc3/plots/autocorrplot.py -${PYSITELIB}/pymc3/plots/autocorrplot.pyc -${PYSITELIB}/pymc3/plots/autocorrplot.pyo -${PYSITELIB}/pymc3/plots/compareplot.py -${PYSITELIB}/pymc3/plots/compareplot.pyc -${PYSITELIB}/pymc3/plots/compareplot.pyo -${PYSITELIB}/pymc3/plots/densityplot.py -${PYSITELIB}/pymc3/plots/densityplot.pyc -${PYSITELIB}/pymc3/plots/densityplot.pyo -${PYSITELIB}/pymc3/plots/energyplot.py -${PYSITELIB}/pymc3/plots/energyplot.pyc -${PYSITELIB}/pymc3/plots/energyplot.pyo -${PYSITELIB}/pymc3/plots/forestplot.py -${PYSITELIB}/pymc3/plots/forestplot.pyc -${PYSITELIB}/pymc3/plots/forestplot.pyo -${PYSITELIB}/pymc3/plots/kdeplot.py -${PYSITELIB}/pymc3/plots/kdeplot.pyc -${PYSITELIB}/pymc3/plots/kdeplot.pyo -${PYSITELIB}/pymc3/plots/pairplot.py -${PYSITELIB}/pymc3/plots/pairplot.pyc -${PYSITELIB}/pymc3/plots/pairplot.pyo ${PYSITELIB}/pymc3/plots/posteriorplot.py ${PYSITELIB}/pymc3/plots/posteriorplot.pyc ${PYSITELIB}/pymc3/plots/posteriorplot.pyo -${PYSITELIB}/pymc3/plots/traceplot.py -${PYSITELIB}/pymc3/plots/traceplot.pyc -${PYSITELIB}/pymc3/plots/traceplot.pyo -${PYSITELIB}/pymc3/plots/utils.py -${PYSITELIB}/pymc3/plots/utils.pyc -${PYSITELIB}/pymc3/plots/utils.pyo ${PYSITELIB}/pymc3/sampling.py ${PYSITELIB}/pymc3/sampling.pyc ${PYSITELIB}/pymc3/sampling.pyo @@ -292,6 +256,9 @@ ${PYSITELIB}/pymc3/step_methods/slicer.pyo ${PYSITELIB}/pymc3/step_methods/smc.py ${PYSITELIB}/pymc3/step_methods/smc.pyc ${PYSITELIB}/pymc3/step_methods/smc.pyo +${PYSITELIB}/pymc3/step_methods/smc_utils.py +${PYSITELIB}/pymc3/step_methods/smc_utils.pyc +${PYSITELIB}/pymc3/step_methods/smc_utils.pyo ${PYSITELIB}/pymc3/step_methods/step_sizes.py ${PYSITELIB}/pymc3/step_methods/step_sizes.pyc ${PYSITELIB}/pymc3/step_methods/step_sizes.pyo @@ -316,6 +283,9 @@ ${PYSITELIB}/pymc3/tests/models.pyo ${PYSITELIB}/pymc3/tests/sampler_fixtures.py ${PYSITELIB}/pymc3/tests/sampler_fixtures.pyc ${PYSITELIB}/pymc3/tests/sampler_fixtures.pyo +${PYSITELIB}/pymc3/tests/test_data_container.py +${PYSITELIB}/pymc3/tests/test_data_container.pyc +${PYSITELIB}/pymc3/tests/test_data_container.pyo ${PYSITELIB}/pymc3/tests/test_diagnostics.py ${PYSITELIB}/pymc3/tests/test_diagnostics.pyc ${PYSITELIB}/pymc3/tests/test_diagnostics.pyo @@ -394,9 +364,6 @@ ${PYSITELIB}/pymc3/tests/test_parallel_sampling.pyo ${PYSITELIB}/pymc3/tests/test_pickling.py ${PYSITELIB}/pymc3/tests/test_pickling.pyc ${PYSITELIB}/pymc3/tests/test_pickling.pyo -${PYSITELIB}/pymc3/tests/test_plots.py -${PYSITELIB}/pymc3/tests/test_plots.pyc -${PYSITELIB}/pymc3/tests/test_plots.pyo ${PYSITELIB}/pymc3/tests/test_posdef_sym.py ${PYSITELIB}/pymc3/tests/test_posdef_sym.pyc ${PYSITELIB}/pymc3/tests/test_posdef_sym.pyo @@ -415,9 +382,9 @@ ${PYSITELIB}/pymc3/tests/test_random.pyo ${PYSITELIB}/pymc3/tests/test_sampling.py ${PYSITELIB}/pymc3/tests/test_sampling.pyc ${PYSITELIB}/pymc3/tests/test_sampling.pyo -${PYSITELIB}/pymc3/tests/test_sgfs.py -${PYSITELIB}/pymc3/tests/test_sgfs.pyc -${PYSITELIB}/pymc3/tests/test_sgfs.pyo +${PYSITELIB}/pymc3/tests/test_shape_handling.py +${PYSITELIB}/pymc3/tests/test_shape_handling.pyc +${PYSITELIB}/pymc3/tests/test_shape_handling.pyo ${PYSITELIB}/pymc3/tests/test_shared.py ${PYSITELIB}/pymc3/tests/test_shared.pyc ${PYSITELIB}/pymc3/tests/test_shared.pyo diff --git a/math/py-pymc3/distinfo b/math/py-pymc3/distinfo index 49e2b99082d..88ba56954a5 100644 --- a/math/py-pymc3/distinfo +++ b/math/py-pymc3/distinfo @@ -1,6 +1,6 @@ -$NetBSD: distinfo,v 1.2 2018/07/23 01:37:54 minskim Exp $ +$NetBSD: distinfo,v 1.3 2019/06/16 19:17:23 adam Exp $ -SHA1 (pymc3-3.5.tar.gz) = d5a699bafd327e455e96fc813915807c1cc86325 -RMD160 (pymc3-3.5.tar.gz) = 8fd3b10bf359a4462e1c7397e69b507e706f94b3 -SHA512 (pymc3-3.5.tar.gz) = 3f0dc51f0088d5262dbd8397a8a328f975718da6c45d4aca29b1e035f583dc0beb1dde7abbea5d459d428699bcb854acaec0680549fd8ba5bb168ca3050e94f6 -Size (pymc3-3.5.tar.gz) = 31996796 bytes +SHA1 (pymc3-3.7.tar.gz) = 6faee9eaee99f0d1386a772bf053d0ad977a8dce +RMD160 (pymc3-3.7.tar.gz) = 3286dbb723ef2025af308e7fad503f774b68be78 +SHA512 (pymc3-3.7.tar.gz) = 7efa3a86b7c9b34a9574faedb26396431168a63ba2c03e4680537ce5798105d6c3c273954f5c54de324015123fc0afa3b9ba8f88617a4e1f17924f66b5430a05 +Size (pymc3-3.7.tar.gz) = 30780326 bytes |