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-rw-r--r--biology/hmmer/patches/patch-aa20
1 files changed, 12 insertions, 8 deletions
diff --git a/biology/hmmer/patches/patch-aa b/biology/hmmer/patches/patch-aa
index 0077f6cffd5..cd1632b55fe 100644
--- a/biology/hmmer/patches/patch-aa
+++ b/biology/hmmer/patches/patch-aa
@@ -1,6 +1,6 @@
-$NetBSD: patch-aa,v 1.3 2004/08/23 14:37:04 ben Exp $
+$NetBSD: patch-aa,v 1.4 2009/07/08 15:20:04 joerg Exp $
---- Makefile.in.orig Fri Jun 13 14:05:13 2003
+--- Makefile.in.orig 2003-10-04 21:01:16.000000000 +0200
+++ Makefile.in
@@ -30,11 +30,12 @@ prefix = @prefix@
exec_prefix = @exec_prefix@
@@ -16,20 +16,24 @@ $NetBSD: patch-aa,v 1.3 2004/08/23 14:37:04 ben Exp $
MANSUFFIX = 1
# your compiler and compiler flags
-@@ -109,10 +110,10 @@ src/libhmmer.a:
+@@ -109,13 +110,13 @@ src/libhmmer.a:
# installs man pages in MANDIR/man1/ (e.g. if MANSUFFIX is 1)
# Creates these directories if they don't exist.
install:
- mkdir -p ${BINDIR}
- -mkdir -p ${MANDIR}/man${MANSUFFIX}
-+ ${MKDIR} ${BINDIR}
-+ -${MKDIR} ${MANDIR}/man${MANSUFFIX}
++ ${MKDIR} ${DESTDIR}${BINDIR}
++ -${MKDIR} ${DESTDIR}${MANDIR}/man${MANSUFFIX}
for file in $(PROGS) $(PVMPROGS); do\
- cp src/$$file $(BINDIR)/;\
-+ $(INSTBIN) src/$$file $(BINDIR)/;\
++ $(INSTBIN) src/$$file ${DESTDIR}$(BINDIR)/;\
done
-for file in hmmer $(PROGS); do\
- $(INSTMAN) documentation/man/$$file.man $(MANDIR)/man$(MANSUFFIX)/$$file.$(MANSUFFIX);\
+- $(INSTMAN) documentation/man/$$file.man $(MANDIR)/man$(MANSUFFIX)/$$file.$(MANSUFFIX);\
++ $(INSTMAN) documentation/man/$$file.man ${DESTDIR}$(MANDIR)/man$(MANSUFFIX)/$$file.$(MANSUFFIX);\
+ done
+
+ # uninstall: Reverses the steps of "make install".
@@ -133,7 +134,7 @@ uninstall:
# subdir, remove everything but binaries and Makefiles.
#
@@ -48,7 +52,7 @@ $NetBSD: patch-aa,v 1.3 2004/08/23 14:37:04 ben Exp $
cp ssdk/rmanprocess.pl ${BASENAME}-${RELEASE}/ssdk/
#
# Make the configure scripts from configure.ac
-@@ -293,7 +294,7 @@ dist:
+@@ -288,7 +289,7 @@ dist:
# directory.
#
ftpdist: