diff options
Diffstat (limited to 'biology')
-rw-r--r-- | biology/biolibc/Makefile | 19 | ||||
-rw-r--r-- | biology/biolibc/PLIST | 34 | ||||
-rw-r--r-- | biology/biolibc/buildlink3.mk | 5 | ||||
-rw-r--r-- | biology/biolibc/distinfo | 10 |
4 files changed, 52 insertions, 16 deletions
diff --git a/biology/biolibc/Makefile b/biology/biolibc/Makefile index 1753661d6e6..2358fc0705d 100644 --- a/biology/biolibc/Makefile +++ b/biology/biolibc/Makefile @@ -1,6 +1,6 @@ -# $NetBSD: Makefile,v 1.1 2021/03/24 15:20:08 bacon Exp $ +# $NetBSD: Makefile,v 1.2 2021/06/11 17:04:55 bacon Exp $ -DISTNAME= biolibc-0.1.1 +DISTNAME= biolibc-0.1.3 CATEGORIES= biology MASTER_SITES= ${MASTER_SITE_GITHUB:=auerlab/} @@ -9,4 +9,19 @@ HOMEPAGE= https://github.com/auerlab/biolibc COMMENT= Low-level high-performance bioinformatics library LICENSE= 2-clause-bsd +.include "../../mk/bsd.prefs.mk" + +.if ${OPSYS} == Darwin +BUILD_TARGET= apple +INSTALL_TARGET= apple-install +.else +INSTALL_TARGET= install-strip +.endif + +MAKE_ENV+= DYLIB_PATH=${PREFIX}/lib + +pre-build: + cd ${WRKSRC} && ${MAKE} PREFIX=${PREFIX} depend + +.include "../../devel/libxtend/buildlink3.mk" .include "../../mk/bsd.pkg.mk" diff --git a/biology/biolibc/PLIST b/biology/biolibc/PLIST index f38ee7d7b30..e669968eba2 100644 --- a/biology/biolibc/PLIST +++ b/biology/biolibc/PLIST @@ -1,7 +1,29 @@ -@comment $NetBSD: PLIST,v 1.1 2021/03/24 15:20:08 bacon Exp $ -include/biostring.h -include/dsvio.h -include/samio.h -include/vcfio.h +@comment $NetBSD: PLIST,v 1.2 2021/06/11 17:04:55 bacon Exp $ +include/biolibc/bed.h +include/biolibc/biolibc.h +include/biolibc/dsv.h +include/biolibc/gff.h +include/biolibc/plist.h +include/biolibc/sam-buff.h +include/biolibc/sam.h +include/biolibc/vcf.h lib/libbiolibc.a -man/man1/biolibc.1 +lib/libbiolibc.so +lib/libbiolibc.so.2 +lib/libbiolibc.so.2.0 +man/man3/bed_check_order.3 +man/man3/bed_gff_cmp.3 +man/man3/bed_read_feature.3 +man/man3/bed_set_chromosome.3 +man/man3/bed_set_end_pos.3 +man/man3/bed_set_fields.3 +man/man3/bed_set_name.3 +man/man3/bed_set_rgb_str.3 +man/man3/bed_set_score.3 +man/man3/bed_set_start_pos.3 +man/man3/bed_set_strand.3 +man/man3/bed_set_thick_end_pos.3 +man/man3/bed_set_thick_start_pos.3 +man/man3/bed_skip_header.3 +man/man3/bed_write_feature.3 +man/man3/biolibc.3 diff --git a/biology/biolibc/buildlink3.mk b/biology/biolibc/buildlink3.mk index 8e9ad1527c7..ffee918c1d8 100644 --- a/biology/biolibc/buildlink3.mk +++ b/biology/biolibc/buildlink3.mk @@ -1,13 +1,12 @@ -# $NetBSD: buildlink3.mk,v 1.1 2021/03/24 15:20:08 bacon Exp $ +# $NetBSD: buildlink3.mk,v 1.2 2021/06/11 17:04:55 bacon Exp $ BUILDLINK_TREE+= biolibc .if !defined(BIOLIBC_BUILDLINK3_MK) BIOLIBC_BUILDLINK3_MK:= -BUILDLINK_API_DEPENDS.biolibc+= biolibc>=0.1.1 +BUILDLINK_API_DEPENDS.biolibc+= biolibc>=0.1.3 BUILDLINK_PKGSRCDIR.biolibc?= ../../biology/biolibc -BUILDLINK_DEPMETHOD.biolibc?= build .endif # BIOLIBC_BUILDLINK3_MK BUILDLINK_TREE+= -biolibc diff --git a/biology/biolibc/distinfo b/biology/biolibc/distinfo index 6ccf45d675d..16c58e996c8 100644 --- a/biology/biolibc/distinfo +++ b/biology/biolibc/distinfo @@ -1,6 +1,6 @@ -$NetBSD: distinfo,v 1.1 2021/03/24 15:20:08 bacon Exp $ +$NetBSD: distinfo,v 1.2 2021/06/11 17:04:55 bacon Exp $ -SHA1 (biolibc-0.1.1.tar.gz) = 7c5861ebfd97dd6d92a489297244debe3c48af05 -RMD160 (biolibc-0.1.1.tar.gz) = 95b9fce0efe0c68be43bea5f875a72efce98f58e -SHA512 (biolibc-0.1.1.tar.gz) = 673fa88ab48bbbcd5d3256a244472fdaa2c76fc5c0fa78663179487f8d8e9c65aaff593220859a54ed6e17f76a080cabe7e5866d12ab3948996e28b0d05d12bc -Size (biolibc-0.1.1.tar.gz) = 11770 bytes +SHA1 (biolibc-0.1.3.tar.gz) = e3381720674b2bc27ec4bfa9c0823fa2012d3422 +RMD160 (biolibc-0.1.3.tar.gz) = e857f91609d71ad6698534d5cf47c070c5538c94 +SHA512 (biolibc-0.1.3.tar.gz) = 92c08cfec13e99c33d2a275ce5dc69c0bd4160a2d7851c2693b3c825a95a0b6797adfd7ca606d70511b63c8e275ab635f88af8ad639556ebe318b1086b59ac3e +Size (biolibc-0.1.3.tar.gz) = 30046 bytes |