diff options
Diffstat (limited to 'math/R')
| -rw-r--r-- | math/R/Makefile | 7 | ||||
| -rw-r--r-- | math/R/PLIST | 60 | ||||
| -rw-r--r-- | math/R/distinfo | 8 |
3 files changed, 59 insertions, 16 deletions
diff --git a/math/R/Makefile b/math/R/Makefile index 148a87b3994..925016ce6f9 100644 --- a/math/R/Makefile +++ b/math/R/Makefile @@ -1,7 +1,6 @@ -# $NetBSD: Makefile,v 1.99 2008/08/31 12:33:53 markd Exp $ +# $NetBSD: Makefile,v 1.100 2008/08/31 12:37:27 markd Exp $ -DISTNAME= R-2.7.0 -PKGREVISION= 1 +DISTNAME= R-2.7.2 CATEGORIES= math MASTER_SITES= ${MASTER_SITE_R_CRAN:=base/R-2/} @@ -49,8 +48,10 @@ CONFIGURE_ARGS+= --without-dxml CONFIGURE_ARGS+= --without-libmoto # Work around missing MAIN__() definition used in -lF77 by AC_CHECK_LIB. +# and other failures due to not linking to support libs during testing CONFIGURE_ENV+= ac_cv_lib_blas_dgemm=yes CONFIGURE_ENV+= ac_cv_lib_blas_dgemm_=yes +CONFIGURE_ENV+= r_cv_complete_blas=yes # Broken test for bzlib >= 1.0.5 in R 2.7.0 CONFIGURE_ENV+= r_cv_have_bzlib=yes diff --git a/math/R/PLIST b/math/R/PLIST index c453388bbe2..072beecf5a5 100644 --- a/math/R/PLIST +++ b/math/R/PLIST @@ -1,4 +1,4 @@ -@comment $NetBSD: PLIST,v 1.7 2008/04/26 02:39:27 markd Exp $ +@comment $NetBSD: PLIST,v 1.8 2008/08/31 12:37:27 markd Exp $ bin/R bin/Rscript lib/R/COPYING @@ -235,11 +235,13 @@ lib/R/library/MASS/R-ex/oats.R lib/R/library/MASS/R-ex/parcoord.R lib/R/library/MASS/R-ex/petrol.R lib/R/library/MASS/R-ex/plot.mca.R +lib/R/library/MASS/R-ex/plot.profile.R lib/R/library/MASS/R-ex/polr.R lib/R/library/MASS/R-ex/predict.glmmPQL.R lib/R/library/MASS/R-ex/predict.lda.R lib/R/library/MASS/R-ex/predict.lqs.R lib/R/library/MASS/R-ex/predict.qda.R +lib/R/library/MASS/R-ex/profile.glm.R lib/R/library/MASS/R-ex/qda.R lib/R/library/MASS/R-ex/rational.R lib/R/library/MASS/R-ex/renumerate.R @@ -377,12 +379,14 @@ lib/R/library/MASS/help/petrol lib/R/library/MASS/help/phones lib/R/library/MASS/help/plot.lda lib/R/library/MASS/help/plot.mca +lib/R/library/MASS/help/plot.profile lib/R/library/MASS/help/polr lib/R/library/MASS/help/predict.glmmPQL lib/R/library/MASS/help/predict.lda lib/R/library/MASS/help/predict.lqs lib/R/library/MASS/help/predict.mca lib/R/library/MASS/help/predict.qda +lib/R/library/MASS/help/profile.glm lib/R/library/MASS/help/qda lib/R/library/MASS/help/quine lib/R/library/MASS/help/rational @@ -532,12 +536,14 @@ lib/R/library/MASS/html/petrol.html lib/R/library/MASS/html/phones.html lib/R/library/MASS/html/plot.lda.html lib/R/library/MASS/html/plot.mca.html +lib/R/library/MASS/html/plot.profile.html lib/R/library/MASS/html/polr.html lib/R/library/MASS/html/predict.glmmPQL.html lib/R/library/MASS/html/predict.lda.html lib/R/library/MASS/html/predict.lqs.html lib/R/library/MASS/html/predict.mca.html lib/R/library/MASS/html/predict.qda.html +lib/R/library/MASS/html/profile.glm.html lib/R/library/MASS/html/qda.html lib/R/library/MASS/html/quine.html lib/R/library/MASS/html/rational.html @@ -686,12 +692,14 @@ lib/R/library/MASS/latex/petrol.tex lib/R/library/MASS/latex/phones.tex lib/R/library/MASS/latex/plot.lda.tex lib/R/library/MASS/latex/plot.mca.tex +lib/R/library/MASS/latex/plot.profile.tex lib/R/library/MASS/latex/polr.tex lib/R/library/MASS/latex/predict.glmmPQL.tex lib/R/library/MASS/latex/predict.lda.tex lib/R/library/MASS/latex/predict.lqs.tex lib/R/library/MASS/latex/predict.mca.tex lib/R/library/MASS/latex/predict.qda.tex +lib/R/library/MASS/latex/profile.glm.tex lib/R/library/MASS/latex/qda.tex lib/R/library/MASS/latex/quine.tex lib/R/library/MASS/latex/rational.tex @@ -3376,11 +3384,13 @@ lib/R/library/grDevices/R-ex/png.R lib/R/library/grDevices/R-ex/postscript.R lib/R/library/grDevices/R-ex/postscriptFonts.R lib/R/library/grDevices/R-ex/ps.options.R +lib/R/library/grDevices/R-ex/quartz.R lib/R/library/grDevices/R-ex/quartzFonts.R lib/R/library/grDevices/R-ex/recordGraphics.R lib/R/library/grDevices/R-ex/rgb.R lib/R/library/grDevices/R-ex/rgb2hsv.R lib/R/library/grDevices/R-ex/trans3d.R +lib/R/library/grDevices/R-ex/x11.R lib/R/library/grDevices/R-ex/x11Fonts.R lib/R/library/grDevices/R-ex/xy.coords.R lib/R/library/grDevices/R-ex/xyTable.R @@ -4309,7 +4319,6 @@ lib/R/library/grid/po/zh_CN/LC_MESSAGES/R-grid.mo lib/R/library/grid/po/zh_CN/LC_MESSAGES/grid.mo lib/R/library/lattice/CONTENTS lib/R/library/lattice/COPYING -lib/R/library/lattice/Changes lib/R/library/lattice/DESCRIPTION lib/R/library/lattice/INDEX lib/R/library/lattice/Meta/Rd.rds @@ -4319,6 +4328,7 @@ lib/R/library/lattice/Meta/hsearch.rds lib/R/library/lattice/Meta/nsInfo.rds lib/R/library/lattice/Meta/package.rds lib/R/library/lattice/NAMESPACE +lib/R/library/lattice/NEWS lib/R/library/lattice/R-ex/Lattice.R lib/R/library/lattice/R-ex/axis.default.R lib/R/library/lattice/R-ex/banking.R @@ -4803,6 +4813,7 @@ lib/R/library/mgcv/Meta/package.rds lib/R/library/mgcv/NAMESPACE lib/R/library/mgcv/R-ex/Predict.matrix.R lib/R/library/mgcv/R-ex/anova.gam.R +lib/R/library/mgcv/R-ex/cSplineDes.R lib/R/library/mgcv/R-ex/choose.k.R lib/R/library/mgcv/R-ex/exclude.too.far.R lib/R/library/mgcv/R-ex/extract.lme.cov.R @@ -4810,17 +4821,19 @@ lib/R/library/mgcv/R-ex/fixDependence.R lib/R/library/mgcv/R-ex/gam.R lib/R/library/mgcv/R-ex/gam.check.R lib/R/library/mgcv/R-ex/gam.models.R -lib/R/library/mgcv/R-ex/gam.neg.bin.R lib/R/library/mgcv/R-ex/gam.selection.R lib/R/library/mgcv/R-ex/gam.side.R +lib/R/library/mgcv/R-ex/gamSim.R lib/R/library/mgcv/R-ex/gamm.R lib/R/library/mgcv/R-ex/get.var.R +lib/R/library/mgcv/R-ex/linear.functional.terms.R lib/R/library/mgcv/R-ex/magic.R lib/R/library/mgcv/R-ex/mgcv-package.R lib/R/library/mgcv/R-ex/mgcv.R lib/R/library/mgcv/R-ex/model.matrix.gam.R lib/R/library/mgcv/R-ex/mono.con.R lib/R/library/mgcv/R-ex/mroot.R +lib/R/library/mgcv/R-ex/negbin.R lib/R/library/mgcv/R-ex/new.name.R lib/R/library/mgcv/R-ex/notExp.R lib/R/library/mgcv/R-ex/notExp2.R @@ -4833,6 +4846,11 @@ lib/R/library/mgcv/R-ex/plot.gam.R lib/R/library/mgcv/R-ex/predict.gam.R lib/R/library/mgcv/R-ex/s.R lib/R/library/mgcv/R-ex/smooth.construct.R +lib/R/library/mgcv/R-ex/smooth.construct.ad.smooth.spec.R +lib/R/library/mgcv/R-ex/smooth.construct.cr.smooth.spec.R +lib/R/library/mgcv/R-ex/smooth.construct.ps.smooth.spec.R +lib/R/library/mgcv/R-ex/smooth.construct.tp.smooth.spec.R +lib/R/library/mgcv/R-ex/smooth.terms.R lib/R/library/mgcv/R-ex/step.gam.R lib/R/library/mgcv/R-ex/summary.gam.R lib/R/library/mgcv/R-ex/te.R @@ -4846,6 +4864,7 @@ lib/R/library/mgcv/R/mgcv.rdx lib/R/library/mgcv/help/AnIndex lib/R/library/mgcv/help/Predict.matrix lib/R/library/mgcv/help/anova.gam +lib/R/library/mgcv/help/cSplineDes lib/R/library/mgcv/help/choose.k lib/R/library/mgcv/help/exclude.too.far lib/R/library/mgcv/help/extract.lme.cov @@ -4859,22 +4878,23 @@ lib/R/library/mgcv/help/gam.check lib/R/library/mgcv/help/gam.control lib/R/library/mgcv/help/gam.convergence lib/R/library/mgcv/help/gam.fit -lib/R/library/mgcv/help/gam.fit2 +lib/R/library/mgcv/help/gam.fit3 lib/R/library/mgcv/help/gam.method lib/R/library/mgcv/help/gam.models -lib/R/library/mgcv/help/gam.neg.bin lib/R/library/mgcv/help/gam.outer lib/R/library/mgcv/help/gam.selection lib/R/library/mgcv/help/gam.setup lib/R/library/mgcv/help/gam.side lib/R/library/mgcv/help/gam2objective lib/R/library/mgcv/help/gamObject +lib/R/library/mgcv/help/gamSim lib/R/library/mgcv/help/gamm lib/R/library/mgcv/help/gamm.setup lib/R/library/mgcv/help/get.var lib/R/library/mgcv/help/influence.gam lib/R/library/mgcv/help/initial.sp lib/R/library/mgcv/help/interpret.gam +lib/R/library/mgcv/help/linear.functional.terms lib/R/library/mgcv/help/logLik.gam lib/R/library/mgcv/help/magic lib/R/library/mgcv/help/magic.post.proc @@ -4884,6 +4904,7 @@ lib/R/library/mgcv/help/mgcv.control lib/R/library/mgcv/help/model.matrix.gam lib/R/library/mgcv/help/mono.con lib/R/library/mgcv/help/mroot +lib/R/library/mgcv/help/negbin lib/R/library/mgcv/help/new.name lib/R/library/mgcv/help/notExp lib/R/library/mgcv/help/notExp2 @@ -4898,6 +4919,11 @@ lib/R/library/mgcv/help/print.gam lib/R/library/mgcv/help/residuals.gam lib/R/library/mgcv/help/s lib/R/library/mgcv/help/smooth.construct +lib/R/library/mgcv/help/smooth.construct.ad.smooth.spec +lib/R/library/mgcv/help/smooth.construct.cr.smooth.spec +lib/R/library/mgcv/help/smooth.construct.ps.smooth.spec +lib/R/library/mgcv/help/smooth.construct.tp.smooth.spec +lib/R/library/mgcv/help/smooth.terms lib/R/library/mgcv/help/smoothCon lib/R/library/mgcv/help/step.gam lib/R/library/mgcv/help/summary.gam @@ -4909,6 +4935,7 @@ lib/R/library/mgcv/help/vis.gam lib/R/library/mgcv/html/00Index.html lib/R/library/mgcv/html/Predict.matrix.html lib/R/library/mgcv/html/anova.gam.html +lib/R/library/mgcv/html/cSplineDes.html lib/R/library/mgcv/html/choose.k.html lib/R/library/mgcv/html/exclude.too.far.html lib/R/library/mgcv/html/extract.lme.cov.html @@ -4921,23 +4948,24 @@ lib/R/library/mgcv/html/gam.check.html lib/R/library/mgcv/html/gam.control.html lib/R/library/mgcv/html/gam.convergence.html lib/R/library/mgcv/html/gam.fit.html -lib/R/library/mgcv/html/gam.fit2.html +lib/R/library/mgcv/html/gam.fit3.html lib/R/library/mgcv/html/gam.html lib/R/library/mgcv/html/gam.method.html lib/R/library/mgcv/html/gam.models.html -lib/R/library/mgcv/html/gam.neg.bin.html lib/R/library/mgcv/html/gam.outer.html lib/R/library/mgcv/html/gam.selection.html lib/R/library/mgcv/html/gam.setup.html lib/R/library/mgcv/html/gam.side.html lib/R/library/mgcv/html/gam2objective.html lib/R/library/mgcv/html/gamObject.html +lib/R/library/mgcv/html/gamSim.html lib/R/library/mgcv/html/gamm.html lib/R/library/mgcv/html/gamm.setup.html lib/R/library/mgcv/html/get.var.html lib/R/library/mgcv/html/influence.gam.html lib/R/library/mgcv/html/initial.sp.html lib/R/library/mgcv/html/interpret.gam.html +lib/R/library/mgcv/html/linear.functional.terms.html lib/R/library/mgcv/html/logLik.gam.html lib/R/library/mgcv/html/magic.html lib/R/library/mgcv/html/magic.post.proc.html @@ -4947,6 +4975,7 @@ lib/R/library/mgcv/html/mgcv.html lib/R/library/mgcv/html/model.matrix.gam.html lib/R/library/mgcv/html/mono.con.html lib/R/library/mgcv/html/mroot.html +lib/R/library/mgcv/html/negbin.html lib/R/library/mgcv/html/new.name.html lib/R/library/mgcv/html/notExp.html lib/R/library/mgcv/html/notExp2.html @@ -4960,7 +4989,12 @@ lib/R/library/mgcv/html/predict.gam.html lib/R/library/mgcv/html/print.gam.html lib/R/library/mgcv/html/residuals.gam.html lib/R/library/mgcv/html/s.html +lib/R/library/mgcv/html/smooth.construct.ad.smooth.spec.html +lib/R/library/mgcv/html/smooth.construct.cr.smooth.spec.html lib/R/library/mgcv/html/smooth.construct.html +lib/R/library/mgcv/html/smooth.construct.ps.smooth.spec.html +lib/R/library/mgcv/html/smooth.construct.tp.smooth.spec.html +lib/R/library/mgcv/html/smooth.terms.html lib/R/library/mgcv/html/smoothCon.html lib/R/library/mgcv/html/step.gam.html lib/R/library/mgcv/html/summary.gam.html @@ -4971,6 +5005,7 @@ lib/R/library/mgcv/html/vcov.gam.html lib/R/library/mgcv/html/vis.gam.html lib/R/library/mgcv/latex/Predict.matrix.tex lib/R/library/mgcv/latex/anova.gam.tex +lib/R/library/mgcv/latex/cSplineDes.tex lib/R/library/mgcv/latex/choose.k.tex lib/R/library/mgcv/latex/exclude.too.far.tex lib/R/library/mgcv/latex/extract.lme.cov.tex @@ -4983,10 +5018,9 @@ lib/R/library/mgcv/latex/gam.check.tex lib/R/library/mgcv/latex/gam.control.tex lib/R/library/mgcv/latex/gam.convergence.tex lib/R/library/mgcv/latex/gam.fit.tex -lib/R/library/mgcv/latex/gam.fit2.tex +lib/R/library/mgcv/latex/gam.fit3.tex lib/R/library/mgcv/latex/gam.method.tex lib/R/library/mgcv/latex/gam.models.tex -lib/R/library/mgcv/latex/gam.neg.bin.tex lib/R/library/mgcv/latex/gam.outer.tex lib/R/library/mgcv/latex/gam.selection.tex lib/R/library/mgcv/latex/gam.setup.tex @@ -4994,12 +5028,14 @@ lib/R/library/mgcv/latex/gam.side.tex lib/R/library/mgcv/latex/gam.tex lib/R/library/mgcv/latex/gam2objective.tex lib/R/library/mgcv/latex/gamObject.tex +lib/R/library/mgcv/latex/gamSim.tex lib/R/library/mgcv/latex/gamm.setup.tex lib/R/library/mgcv/latex/gamm.tex lib/R/library/mgcv/latex/get.var.tex lib/R/library/mgcv/latex/influence.gam.tex lib/R/library/mgcv/latex/initial.sp.tex lib/R/library/mgcv/latex/interpret.gam.tex +lib/R/library/mgcv/latex/linear.functional.terms.tex lib/R/library/mgcv/latex/logLik.gam.tex lib/R/library/mgcv/latex/magic.post.proc.tex lib/R/library/mgcv/latex/magic.tex @@ -5009,6 +5045,7 @@ lib/R/library/mgcv/latex/mgcv.tex lib/R/library/mgcv/latex/model.matrix.gam.tex lib/R/library/mgcv/latex/mono.con.tex lib/R/library/mgcv/latex/mroot.tex +lib/R/library/mgcv/latex/negbin.tex lib/R/library/mgcv/latex/new.name.tex lib/R/library/mgcv/latex/notExp.tex lib/R/library/mgcv/latex/notExp2.tex @@ -5022,7 +5059,12 @@ lib/R/library/mgcv/latex/predict.gam.tex lib/R/library/mgcv/latex/print.gam.tex lib/R/library/mgcv/latex/residuals.gam.tex lib/R/library/mgcv/latex/s.tex +lib/R/library/mgcv/latex/smooth.construct.ad.smooth.spec.tex +lib/R/library/mgcv/latex/smooth.construct.cr.smooth.spec.tex +lib/R/library/mgcv/latex/smooth.construct.ps.smooth.spec.tex lib/R/library/mgcv/latex/smooth.construct.tex +lib/R/library/mgcv/latex/smooth.construct.tp.smooth.spec.tex +lib/R/library/mgcv/latex/smooth.terms.tex lib/R/library/mgcv/latex/smoothCon.tex lib/R/library/mgcv/latex/step.gam.tex lib/R/library/mgcv/latex/summary.gam.tex diff --git a/math/R/distinfo b/math/R/distinfo index 28a9667a73f..c63e79f1263 100644 --- a/math/R/distinfo +++ b/math/R/distinfo @@ -1,8 +1,8 @@ -$NetBSD: distinfo,v 1.39 2008/08/31 12:33:53 markd Exp $ +$NetBSD: distinfo,v 1.40 2008/08/31 12:37:27 markd Exp $ -SHA1 (R-2.7.0.tar.gz) = d0a3193e474696ad767845ef6b8ee1555a26b898 -RMD160 (R-2.7.0.tar.gz) = c3c9cf0c0a1eb6191492f1be19e277e8223a42c9 -Size (R-2.7.0.tar.gz) = 16396250 bytes +SHA1 (R-2.7.2.tar.gz) = 0de9f00ae58e67840fc2daab8973d37d97d78535 +RMD160 (R-2.7.2.tar.gz) = 948e379f07cbfeda13c46947791f755e1faabbf7 +Size (R-2.7.2.tar.gz) = 16466658 bytes SHA1 (patch-ab) = b724b549cd9920865c4d4ae60c71dff48c4c0c06 SHA1 (patch-ac) = 64c47fc44c437ad79de53fc313f280700590704f SHA1 (patch-ad) = e8f6b6989957a6872806716263eabb9feb636638 |