pkgsrc - [no description]

Age	Commit message (Collapse)	Author	Files	Lines
2005-02-22	Add RMD160 digests in addition to the SHA1 ones.	agc	1	-1/+2

2004-08-19	Update to glimmer-2.13, thanks to cngo@nmsu.edu.	ben	2	-7/+7
	CHANGELOG, 12 October 2003 add -X option to glimmer2, to allow orfs extending off ends of sequence to be scored. Also fix bug affecting -p and -o options when user chose zero overlap.
2004-04-11	Convert to buildlink3.	snj	1	-2/+2

2004-01-20	Move WRKSRC definition away from the first paragraph in a Makefile.	agc	1	-2/+2

2003-10-07	Apply patches from Tyler Retzlaff in PR pkg/23083 to make this behave with	jschauma	4	-10/+38
	gcc3. While here, update to version 2.12 (previous version was erraneously named 2.1, when it should have been 2.10) which is the only distfile available on the ftp site. Changelog seems to say: - Fix bug on long-orfs.cc to avoid occasional array out-of-bounds error (detected on Mac OS X).
2003-09-30	Initial import of glimmer, one of the many packages provided by	jschauma	5	-0/+78
	brook at biology dot nmsu dot edu and his team at NMSU. Glimmer (Gene Locator and Interpolated Markov Modeler) is a system for finding genes in microbial DNA, especially the genomes of bacteria and archaea. Glimmer uses interpolated Markov models (IMMs) to identify the coding regions and distinguish them from noncoding DNA. The IMM approach uses a combination of Markov models from 1st through 8th-order, weighting each model according to its predictive power.