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2006-10-04Update MASTER_SITES and/or HOMEPAGE, from Sergey Svishchev.wiz2-4/+4
2006-10-02Fixed one unit test.rillig2-1/+23
2006-09-09Rename variable MAKEFILE to MAKE_FILE.obache3-6/+6
2006-07-08Remove share/fonts, if unused.wiz1-1/+2
2006-06-21Add csh:run to USE_TOOLS because this package installs csh scripts.minskim1-3/+3
Bump PKGREVISION.
2006-06-21Reorder dirrm@'s so that the package is deinstalled propertly.minskim1-4/+4
PKGREVISION will be bumped with another change shortly.
2006-06-05Fix CHECK_INTERPRETER errors and warnings. Bump PKGREVISION.minskim1-2/+12
2006-05-02add LICENSEgdt1-1/+2
2006-04-22Removed the superfluous "quotes" and 'quotes' from variables that don'trillig1-2/+2
need them, for example RESTRICTED and SUBST_MESSAGE.*.
2006-04-19Fix build with newer versions of GNU make.joerg2-1/+25
2006-04-17Bump BUILDLINK_ABI_DEPENDS.png and PKGREVISION for png-1.2.9nb2 update.wiz1-2/+2
2006-04-17Strip ${PKGLOCALEDIR} from PLISTs of packages that already obeyjlam1-8/+8
PKGLOCALEDIR and which install their locale files directly under ${PREFIX}/${PKGLOCALEDIR} and sort the PLIST file entries. From now on, pkgsrc/mk/plist/plist-locale.awk will automatically handle transforming the PLIST to refer to the correct locale directory.
2006-03-04Point MAINTAINER to pkgsrc-users@NetBSD.org in the case where nojlam3-6/+6
developer is officially maintaining the package. The rationale for changing this from "tech-pkg" to "pkgsrc-users" is that it implies that any user can try to maintain the package (by submitting patches to the mailing list). Since the folks most likely to care about the package are the folks that want to use it or are already using it, this would leverage the energy of users who aren't developers.
2006-02-26uses both C and C++schwarz1-1/+3
2006-02-26Uses both C and C++schwarz1-1/+3
2006-02-13Changes 1.6.8:adam3-8/+8
This release fixes a bug i(crash on startup) that was exposed by gcc 4. It also adds detection of the recently released OpenBabel 2.0 and the ability to use Openbabel for exporting to foreign file formats. Subscript encoding in the SVG export was tweaked again to work around current limitations in the SVG support of Firefox 1.5 and Konqueror 3.x.
2006-02-05Recursive revision bump / recommended bump for gettext ABI change.joerg10-13/+20
2006-01-29Updated biology/mummer to release 3.18. Changes include:schwarz5-32/+134
- MUMmer now resides at Sourceforge - new tools such as delta-filter - more extensive html documentation and examples - bug fixes
2006-01-04One of the first questions in every C class is about the return typejoerg3-1/+42
of main. Why does it have to be int? Well, not returning anything can result in a random exit code. Add make(1) as caller and the normal behaviour of just stopping on the first error and this package has a very low success rate for building e.g. on DragonFly.
2005-12-29Remove USE_PKGINSTALL from pkgsrc now that mk/install/pkginstall.mkjlam1-2/+1
automatically detects whether we want the pkginstall machinery to be used by the package Makefile.
2005-12-28mkdirhier used as tool. Install only man page, use the imake variablesjoerg2-6/+5
to decide where it did go. Bump revision.
2005-12-28Don't depend on hard-coded /usr/X11R6 and honor CFLAGS. Bump revision.joerg3-10/+30
2005-12-13Don't hard-wire -lpthread, use PTHREAD_*.joerg2-4/+4
2005-12-12Bump all motif packages for recent openmotif update. The major versionjoerg1-1/+2
of the shared libXm has changed.
2005-12-05Fixed pkglint warnings. The warnings are mostly quoting issues, forrillig4-12/+12
example MAKE_ENV+=FOO=${BAR} is changed to MAKE_ENV+=FOO=${BAR:Q}. Some other changes are outlined in http://mail-index.netbsd.org/tech-pkg/2005/12/02/0034.html
2005-11-19malloc.h is nonstandard, and not available on all platforms.kristerw2-1/+14
2005-11-05Add azara.minskim1-1/+2
2005-11-05Import azara from pkgsrc-wip. Packaged by David Price.minskim6-0/+299
Azara is a suite of programs to process and view NMR data.
2005-11-03Fixed wrong use of WRKSRC.rillig4-19/+20
2005-11-03Profit has changed to versioned distfiles almost a year ago, so there'srillig3-17/+15
no need to keep DIST_SUBDIR. Also fixed the misuse of WRKSRC to define BUILD_DIRS.
2005-11-03Fixed wrong usage of WRKSRC.rillig3-10/+10
2005-10-31MITSHM is not available on Interix, so don't request it.tv3-8/+19
2005-10-24Replaced ${PKGNAME} with ${PKGNAME_NOREV} in WRKSRC. Removed emptyrillig3-5/+3
trailing line from DESCR. Removed empty line from PLIST.
2005-10-07add pymolperry1-1/+2
2005-10-07add pymol 0.98, a molecular visualization systemperry4-0/+829
2005-10-07Install man page with INSTALL_MAN.wiz1-2/+2
2005-10-07update RasMol to 2.7.3perry6-38/+42
Extensive changelist is at: http://www.bernstein-plus-sons.com/software/rasmol/
2005-08-26Changes 1.6.7:adam4-35/+36
- Fixed several serious bugs related to label rendering and printing that occured when chemtool was built with GTK 2 instead of GTK 1.2 (see ChangeLog for details) - SVG export now adds a namespace header as required by current builds of the firefox browser - SVG export now uses color values instead of color names for better SVGT compatibility - The separation between the lines of multiple bonds is configurable - The keys of the numeric keypad now create two dots instead of a line for free electron pairs when the Shift key is pressed - Two new bond types for drawing filled and unfilled p orbital lobes - chemtool now checks for fig2sxd (sourceforge.net) and offers to export to OpenOffice Draw format when it is present. - rpm packages did not install the dutch locale file. Chnges 1.6.6: - Fixed bug in molfile preview that caused an immediate crash in 1.6.5 - Made drawing of wiggly bonds work again
2005-08-06Bump the PKGREVISIONs of all (638) packages that hardcode the locationsjlam1-1/+2
of Perl files to deal with the perl-5.8.7 update that moved all pkgsrc-installed Perl files into the "vendor" directories.
2005-07-16Remove some unnecessarily strong dependencies on perl that resultedjlam1-3/+2
from including perl5/buildlink3.mk. These packages just need the Perl interpreter, and can just add "perl" to USE_TOOLS instead.
2005-07-15Drop distinction between PKGSRC_USE_TOOLS and USE_TOOLS by makingjlam2-4/+4
PKGSRC_USE_TOOLS go away. There is now only a single USE_TOOLS variable that specifies all of the tools we need to build/run the package.
2005-07-13Turn PERL5_PACKLIST into a relative path instead of an absolute path.jlam1-2/+2
These paths are now relative to PERL5_PACKLIST_DIR, which currently defaults to ${PERL5_SITEARCH}. There is no change to the binary packages.
2005-06-19Prevent paths to the build directories from being included in the package.kristerw3-2/+18
Bump PKGREVISION.
2005-06-16Create directories before installing files into them.jlam12-12/+29
2005-06-01Massive cleanup of buildlink3.mk and builtin.mk files in pkgsrc.jlam2-4/+3
Several changes are involved since they are all interrelated. These changes affect about 1000 files. The first major change is rewriting bsd.builtin.mk as well as all of the builtin.mk files to follow the new example in bsd.builtin.mk. The loop to include all of the builtin.mk files needed by the package is moved from bsd.builtin.mk and into bsd.buildlink3.mk. bsd.builtin.mk is now included by each of the individual builtin.mk files and provides some common logic for all of the builtin.mk files. Currently, this includes the computation for whether the native or pkgsrc version of the package is preferred. This causes USE_BUILTIN.* to be correctly set when one builtin.mk file includes another. The second major change is teach the builtin.mk files to consider files under ${LOCALBASE} to be from pkgsrc-controlled packages. Most of the builtin.mk files test for the presence of built-in software by checking for the existence of certain files, e.g. <pthread.h>, and we now assume that if that file is under ${LOCALBASE}, then it must be from pkgsrc. This modification is a nod toward LOCALBASE=/usr. The exceptions to this new check are the X11 distribution packages, which are handled specially as noted below. The third major change is providing builtin.mk and version.mk files for each of the X11 distribution packages in pkgsrc. The builtin.mk file can detect whether the native X11 distribution is the same as the one provided by pkgsrc, and the version.mk file computes the version of the X11 distribution package, whether it's built-in or not. The fourth major change is that the buildlink3.mk files for X11 packages that install parts which are part of X11 distribution packages, e.g. Xpm, Xcursor, etc., now use imake to query the X11 distribution for whether the software is already provided by the X11 distribution. This is more accurate than grepping for a symbol name in the imake config files. Using imake required sprinkling various builtin-imake.mk helper files into pkgsrc directories. These files are used as input to imake since imake can't use stdin for that purpose. The fifth major change is in how packages note that they use X11. Instead of setting USE_X11, package Makefiles should now include x11.buildlink3.mk instead. This causes the X11 package buildlink3 and builtin logic to be executed at the correct place for buildlink3.mk and builtin.mk files that previously set USE_X11, and fixes packages that relied on buildlink3.mk files to implicitly note that X11 is needed. Package buildlink3.mk should also include x11.buildlink3.mk when linking against the package libraries requires also linking against the X11 libraries. Where it was obvious, redundant inclusions of x11.buildlink3.mk have been removed.
2005-05-25Add RMD160 checksum.wiz1-1/+2
2005-05-24Removed an empty line.rillig1-2/+1
2005-05-23Removed trailing empty line.rillig1-2/+1
2005-05-23Removed trailing white-space.rillig7-24/+24
2005-05-22Remove USE_GNU_TOOLS and replace with the correct USE_TOOLS definitions:jlam3-6/+6
USE_GNU_TOOLS -> USE_TOOLS awk -> gawk m4 -> gm4 make -> gmake sed -> gsed yacc -> bison
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