summaryrefslogtreecommitdiff
path: root/biology
AgeCommit message (Expand)AuthorFilesLines
2018-12-22Add stacksbacon1-1/+2
2018-12-22biology/stacks: import stacks-2.2bacon4-0/+102
2018-12-21Add kallistobacon1-1/+2
2018-12-21biology/kallisto: import kallisto-0.45.0bacon7-0/+163
2018-12-13revbump for boost 1.69.0adam1-1/+2
2018-12-09revbump after updating textproc/icuadam1-2/+2
2018-12-05py-pydicom: Update to 1.2.1.bsiegert2-7/+7
2018-11-15bcftools: added version 1.9adam5-1/+84
2018-11-14Revbump after cairo 1.16.0 update.kleink4-8/+8
2018-11-12Recursive revbump from hardbuzz-2.1.1ryoon4-8/+8
2018-11-06samtools: updated to 1.9adam2-18/+19
2018-11-06htslib: updated to 1.9adam2-22/+17
2018-10-31biology: +py-pydicomleot1-1/+2
2018-10-31py-pydicom: Import py-pydicom-1.2.0 as biology/py-pydicomleot4-0/+465
2018-09-29xylem: build fixtnn2-1/+16
2018-08-22Recursive bump for perl5-5.28.0wiz11-18/+22
2018-08-04biology/plinkseq: Requires c++11 to build with protobuf-3.6.0minskim1-3/+3
2018-07-25Add trimmomaticbacon1-1/+2
2018-07-25biology/trimmomatic: import Trimmomatic-0.38bacon4-0/+47
2018-07-20Recursive revbump from textproc/icu-62.1ryoon1-2/+2
2018-07-18Mark packages that require C++03 (or the GNU variants) if they fail withjoerg2-4/+4
2018-07-04*: Move SUBST_STAGE from post-patch to pre-configurejperkin3-7/+7
2018-07-03extend PYTHON_VERSIONS_ for Python 3.7adam1-2/+2
2018-05-22biology/ncbi-blast+: Respect env to support PKGSRC_USE_RELRObacon3-8/+9
2018-05-07Add samtoolsbacon1-1/+2
2018-05-07biology/samtools: import samtools-1.8bacon4-0/+58
2018-05-01biology/htslib: Fix category in bl3bacon1-2/+2
2018-04-30Add htslibbacon1-1/+2
2018-04-30biology/htslib: import htslib-1.8bacon5-0/+94
2018-04-29ncbi-blast+: removed references to wipadam1-2/+2
2018-04-27Add ncbi-blast+bacon1-1/+2
2018-04-27biology/ncbi-blast+: import ncbi-blast+-2.7.1bacon11-0/+4348
2018-04-16Recursive bump for new fribidi dependency in pango.wiz4-8/+8
2018-03-12Recursive bumps for fontconfig and libzip dependency changes.wiz4-8/+8
2018-02-11plinkseq: use httpswiz1-3/+3
2018-01-17Belated PKGREVISION bump for devel/protobuf update.jperkin1-2/+2
2018-01-07Fix indentation in buildlink3.mk files.rillig1-2/+2
2018-01-01Sort PLIST files.rillig3-6/+6
2018-01-01Replaced $(ROUND) with ${CURLY} variable references.rillig1-1/+1
2018-01-01Cleanup: replace curly braces with parentheses.rillig3-15/+15
2017-12-27Re-add patch to bring timeval definition and select prototype into scope.he3-2/+19
2017-12-24chemical-mime-data: comment out dead siteswiz1-4/+3
2017-12-17biology/bwa: Update to 0.7.17bacon4-34/+39
2017-10-03transfig: remove, replaced by print/fig2devwiz1-2/+2
2017-09-17p5-Bio-ASN1-EntrezGene: update to 1.72.wiz2-8/+10
2017-09-17bioperl: update to 1.007002.wiz2-7/+9
2017-09-04Comment out dead sites.wiz1-2/+2
2017-09-03Comment out dead MASTER_SITES/HOMEPAGEs.wiz1-3/+3
2017-08-01Comment out some dead HOMEPAGEs.wiz5-10/+10
2017-06-05Recursive revbump from lang/perl5 5.26.0ryoon1-2/+2
generated by cgit v1.2.3 (git 2.39.1) at 2024-06-17 01:27:17 +0000