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path:
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biology
Age
Commit message (
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Author
Files
Lines
2019-07-20
*: recursive bump for nettle 3.5.1
wiz
2
-4
/
+4
2019-07-01
Recursive revbump from boost-1.70.0
ryoon
2
-3
/
+4
2019-06-30
Update packages using a search.cpan.org HOMEPAGE to metacpan.org.
nia
1
-2
/
+2
2019-06-28
biology/ncbi-blast+: Unbreak configure
bacon
1
-3
/
+4
2019-06-24
More http -> https.
nia
1
-2
/
+2
2019-05-29
Revbump after updating graphics/glew
adam
1
-2
/
+2
2019-05-11
biology/vsearch: Upgrade to 2.13.4
bacon
7
-99
/
+10
2019-05-10
Add vsearch
bacon
1
-1
/
+2
2019-05-10
biology/vsearch: import vsearch-2.13.3
bacon
8
-0
/
+173
2019-05-04
Add fastp
bacon
1
-1
/
+2
2019-05-04
biology/fastp: import fastp-0.20.0
bacon
5
-0
/
+83
2019-05-01
biology/kallisto: Switch from archivers/szip to archivers/libaec
bacon
1
-2
/
+3
2019-04-26
fix some whitespace, mostly introduced in the previous
maya
1
-2
/
+2
2019-04-26
Omit mentions of python 34 and 35, after those were removed.
maya
1
-2
/
+2
2019-04-25
PKGREVISION bump for anything using python without a PYPKGPREFIX.
maya
5
-6
/
+10
2019-04-06
biology/chemtool: Fix build on CentOS and NetBSD
bacon
1
-2
/
+6
2019-04-03
Recursive revbump from textproc/icu
ryoon
1
-1
/
+2
2019-03-27
biology/samtools: Add zlib dependency for Linux
bacon
1
-1
/
+2
2019-03-27
biology/bcftools: Add zlib dependency for Linux
bacon
1
-2
/
+3
2019-01-15
Add hisat2
bacon
1
-1
/
+2
2019-01-15
biology/hisat2: import hisat2-2.1.0.23
bacon
6
-0
/
+579
2019-01-13
Multiple packages: Replace obsolete maintainer email
bacon
3
-6
/
+6
2019-01-07
ncbi-blast+: Upgrade to 2.8.1
bacon
6
-38
/
+157
2019-01-07
Add canu
bacon
1
-1
/
+2
2019-01-07
biology/canu: import canu-1.8
bacon
8
-0
/
+356
2018-12-22
Add stacks
bacon
1
-1
/
+2
2018-12-22
biology/stacks: import stacks-2.2
bacon
4
-0
/
+102
2018-12-21
Add kallisto
bacon
1
-1
/
+2
2018-12-21
biology/kallisto: import kallisto-0.45.0
bacon
7
-0
/
+163
2018-12-13
revbump for boost 1.69.0
adam
1
-1
/
+2
2018-12-09
revbump after updating textproc/icu
adam
1
-2
/
+2
2018-12-05
py-pydicom: Update to 1.2.1.
bsiegert
2
-7
/
+7
2018-11-15
bcftools: added version 1.9
adam
5
-1
/
+84
2018-11-14
Revbump after cairo 1.16.0 update.
kleink
4
-8
/
+8
2018-11-12
Recursive revbump from hardbuzz-2.1.1
ryoon
4
-8
/
+8
2018-11-06
samtools: updated to 1.9
adam
2
-18
/
+19
2018-11-06
htslib: updated to 1.9
adam
2
-22
/
+17
2018-10-31
biology: +py-pydicom
leot
1
-1
/
+2
2018-10-31
py-pydicom: Import py-pydicom-1.2.0 as biology/py-pydicom
leot
4
-0
/
+465
2018-09-29
xylem: build fix
tnn
2
-1
/
+16
2018-08-22
Recursive bump for perl5-5.28.0
wiz
11
-18
/
+22
2018-08-04
biology/plinkseq: Requires c++11 to build with protobuf-3.6.0
minskim
1
-3
/
+3
2018-07-25
Add trimmomatic
bacon
1
-1
/
+2
2018-07-25
biology/trimmomatic: import Trimmomatic-0.38
bacon
4
-0
/
+47
2018-07-20
Recursive revbump from textproc/icu-62.1
ryoon
1
-2
/
+2
2018-07-18
Mark packages that require C++03 (or the GNU variants) if they fail with
joerg
2
-4
/
+4
2018-07-04
*: Move SUBST_STAGE from post-patch to pre-configure
jperkin
3
-7
/
+7
2018-07-03
extend PYTHON_VERSIONS_ for Python 3.7
adam
1
-2
/
+2
2018-05-22
biology/ncbi-blast+: Respect env to support PKGSRC_USE_RELRO
bacon
3
-8
/
+9
2018-05-07
Add samtools
bacon
1
-1
/
+2
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