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2019-08-08Update all R packages to canonical form.brook1-6/+4
The canonical form [1] of an R package Makefile includes the following: - The first stanza includes R_PKGNAME, R_PKGVER, PKGREVISION (as needed), and CATEGORIES. - HOMEPAGE is not present but defined in math/R/Makefile.extension to refer to the CRAN web page describing the package. Other relevant web pages are often linked from there via the URL field. This updates all current R packages to this form, which will make regular updates _much_ easier, especially using pkgtools/R2pkg. [1] http://mail-index.netbsd.org/tech-pkg/2019/08/02/msg021711.html
2019-07-31R-RcppEigen: update to version 0.3.3.5.0.brook3-12/+12
Update to the canonical form of an R package and fix the LICENSE field.
2018-07-28Remove MASTER_SITES= from individual R package Makefiles.brook1-2/+1
Each R package should include ../../math/R/Makefile.extension, which also defines MASTER_SITES. Consequently, it is redundant for the individual packages to do the same. Package-specific definitions also prevent redefining MASTER_SITES in a single common place.
2018-03-09math/R-RcppEigen: Update to 0.3.3.4.0minskim2-10/+8
Changes: - Updated to version 3.3.4 of Eigen - Condition long long use on C++11. - Pragmas for g++ & clang to suppress diagnostics messages are disabled per CRAN Policy; use -Wno-ignored-attributes to quieten.
2018-01-22Add buildlink3.mkwen1-0/+12
2018-01-22Update to 0.3.3.3.1wen2-7/+9
Add blas and lapack as DEPENDS Upstream changes: 2017-11-19 Dirk Eddelbuettel <edd@debian.org> * DESCRIPTION (Version, Date): Release 0.3.3.3.1 * R/inline.R: Use '::' not ':::' for Rcpp.plugin.maker 2017-08-26 Dirk Eddelbuettel <edd@debian.org> * .travis.yml (before_install): Use https for curl fetch 2017-06-06 Yu Gong <armgong@yahoo.com> * inst/include/unsupported/Eigen/src/SparseExtra/MatrixMarketIterator.h: Also permit compilation under Haiku-OS 2017-05-28 Dirk Eddelbuettel <edd@debian.org> * inst/examples/lmBenchmark.R (do_bench): Remove spurious argument in call to RcppEigen:::Eigen_SSE() (cf github issue #44) 2017-04-29 Dirk Eddelbuettel <edd@debian.org> * DESCRIPTION: Release 0.3.3.3.0 [ which again owes a very big thank you to Yixuan for doing the work! ] 2017-04-27 Dirk Eddelbuettel <edd@debian.org> * .travis.yml: Switch to using run.sh for Travis CI 2017-04-27 Yixuan Qiu <yixuan.qiu@cos.name> [ In RcppEigen 0.3.3.* branch ] * inst/include/Eigen/src/Core/arch/CUDA/Half.h: Fixed compiler warning on 'long long' type in C++ 98 mode 2017-03-14 Dirk Eddelbuettel <edd@debian.org> * DESCRIPTION (Version, Date): Release 0.3.2.9.1 * src/init.c (R_init_RcppEigen): Call R_registerRoutines() and R_useDynamicSymbols() * NAMESPACE: Use .registration=TRUE on useDynLib * R/fastLm.R (fastLmPure): Remove erroneous fourth argument from .Call 2017-03-13 Martin Maechler <maechler@r-project.org> * inst/include/RcppEigenCholmod.h: Synchronize with Matrix package 2017-02-21 Yixuan Qiu <yixuan.qiu@cos.name> [ In RcppEigen 0.3.3.* branch ] * inst/include/Eigen: Updated to release 3.3.3 of Eigen * inst/include/unsupported: Idem * DESCRIPTION: Idem * README.md: Idem 2017-01-20 Yixuan Qiu <yixuan.qiu@cos.name> [ In RcppEigen 0.3.3.* branch ] * inst/include/Eigen: Updated to release 3.3.2 of Eigen * inst/include/unsupported: Idem * DESCRIPTION: Idem * README.md: Idem * inst/unitTests/runit.RcppEigen.R, inst/unitTests/runit.sparse.R: Explicitly convert matrix size to `double` type such that Rcpp can properly return the value to R, thanks to ChingChuan and Dirk 2017-01-20 ChingChuan Chen <zw12356@gmail.com> [ In RcppEigen 0.3.3.* branch ] * inst/include/Eigen: Updated to release 3.3.1 of Eigen * inst/include/unsupported: Idem * DESCRIPTION: Idem * inst/examples/lmBenchmark.R: Fixed function names 2016-12-22 Dirk Eddelbuettel <edd@debian.org> * DESCRIPTION (URL, BugReports): Added / updated 2016-11-12 Yixuan Qiu <yixuan.qiu@cos.name> [ In RcppEigen 0.3.3.* branch ] * inst/include/Eigen: Updated to release 3.3.0 of Eigen * inst/include/unsupported: Idem * DESCRIPTION: Idem * README.md: Idem * inst/include/RcppEigenForward.h, inst/include/RcppEigenWrap.h: Added exporters for the new Map<SparseMatrix<T> > type * inst/unitTests/runit.sparse.R: Unit tests for the new type 2016-08-20 Dirk Eddelbuettel <edd@debian.org> * DESCRIPTION: Release 0.3.2.9.0 with big thanks to Yixuan for doing the work! 2016-08-19 Yixuan Qiu <yixuan.qiu@cos.name> * inst/include/Eigen: Updated to release 3.2.9 of Eigen * README.md: Updated version number and fixed the NOTE from CRAN URL check 2016-04-30 Dirk Eddelbuettel <edd@debian.org> * README.md: Expanded 2016-04-28 James Joseph Balamuta <balamut2@illinois.edu> * inst/include/RcppEigenWrap.h: Added an exporter class for Map::RowVectorX<t> per http://stackoverflow.com/questions/36920689/ * inst/include/unitTests/runit.RcppEigen.R: Added row exporter unit test.
2016-07-27Import RcppEigen-0.3.2.8.1 as math/R-RcppEigen.wen3-0/+32
R and Eigen integration using Rcpp. Eigen is a C++ template library for linear algebra: matrices, vectors, numerical solvers and related algorithms. It supports dense and sparse matrices on integer, floating point and complex numbers, decompositions of such matrices, and solutions of linear systems. Its performance on many algorithms is comparable with some of the best implementations based on Lapack and level-3 BLAS. The RcppEigen package includes the header files from the Eigen C++ template library (currently version 3.2.2).
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