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2010-05-19+ TinySVMobache1-1/+2
2010-05-19Import TinySVM-0.09 as math/TinySVM.obache6-0/+74
TinySVM is an implementation of Support Vector Machines (SVMs) [Vapnik 95], [Vapnik 98] for the problem of pattern recognition. Support Vector Machines is a new generation learning algorithms based on recent advances in statistical learning theory, and applied to large number of real-world applications, such as text categorization, hand-written character recognition.
2010-05-17update to 0.10.3drochner3-10/+10
changes: -UI improvements -bugfixes -Improve error handle for complex functions -Improve IMPOWER
2010-05-16Update pear-Numbers_Words package to 0.16.2.taca2-6/+6
Changelog: * Fixed bug #16435 (improper use of substr() in Polish extension); * Fixed bug #16667 (wrong spelling of 40 in Hungarian extension) (Vlajos); * Fixed bug #16733 (incorrect rounding of cents); * Added optional dependency on Math_BigInteger; * Improved unit tests (Daniel O'Connor).
2010-05-15Changes 0.9.2:adam4-23/+32
* To compile fityk, Boost (only headers) and xylib must be installed first. Fityk tarball does not contain a copy of boost and xylib now. * user-defined functions: split functions can be defined in this way: SplitG(h, c, w1, w2) = x < c ? Gaussian(h, c, w1) : Gaussian(h, c, w2) * added info-numeric-format option * a couple of bug fixes Changes 0.9.1: * added cfityk to Windows installer * Unix only: fitting can be interrupted by the INT signal * changed output of "info errors", see the manual for details * GUI: "plot in @n" changes selected datasets (useful in scripts) * many bugs fixed Changes 0.9.0: * GUI: Data > Editor dialog was replaced with two dialogs: Data > Table and Data > Edit Transformations * added Lua bindings (configure option --enable-lua) * a syntax to execute output from external program: command ! program [args...] * xyConvert (which requires wx 2.9) is built by default. Added flag --disable-xyconvert, which must be used with wx 2.8. * parsing of info command was rewritten, but functionality is almost the same * bug fixes
2010-05-15Changes 0.6:adam3-15/+18
* fixed reading of Bruker v3 files * changes in API, added C API Changes 0.5: * added support for compressed files \*.gz (requires zlib) and \*.bz2 (bzlib)
2010-05-07Update to Maxima 5.21.1:asau3-7/+11
New items in core: * plot3d: multiple surfaces; built-in spherical transformation Other revisions: * revision of hypergeometic functions * extension of Bessel functions * extension of abs_defint function * extension of Riemann zeta function * limits of signum functions * package draw: new graphic object 'tube' Bug fixes: 2979579: plot3d with format xmaxima does not work in Xmaxima 2976744: postscript terminal requires manual reset of default termina 2976657: Usage of gammagreek and %gammagreek 2974616: mat_cond 2969599: integrate bug? 2968344: gamma_incomplete(1.0, 4.368265444147715e+19) fails 2968174: Integration of hypergeometric bug 2965201: run_testsuite() causes Lisp error 2965115: 2*%e,numer -> single float precision 2962943: simplifya gives Lisp error for a cons 2961822: sinh(0.0b0) causes Maxima to abort 2957758: plotting gamma_incomplete_regularized incorrect 2954141: Kummer reflection 2953369: Definite Integration of 1/(a-b*cos(x)) wrong 2949677: hypergeometric floating point 2948800: integrate((1-cos(2*x)^2)^2/x^4,x,0,inf) wrong 2945609: incomplete/misleading documentation of coeff 2943581: Grind omits empty strings 2943400: 'linel' command can crash 'maxima' 2938716: too much evaluation in translated code 2938177: simplify_sum(sum(k^n,k,1,m)) -> stack overflow 2938078: Crash on attached input 2937837: find_root_error documentation incorrect 2935631: bfloat(log(n)) can be different from log(bfloat(n)) 2933996: abs_integrate bug 2933440: sqrt(-z^2) simplifies to %i*sqrt(z^2) for z complex 2932096: allroots fails for real polynomial. 2927502: abs() or cabs() are much slower than just sqrt(re^2+im^2) 2924831: file_type is wrong for ccl on mac os x 2921946: Expansion of bessel_k(1/2,x) with radexpand:false 2920190: non-integer value for maxposex 2919296: binomial sums 2914376: implicit_plot error 2914296: Limit gets Maxima stuck 2914176: Conversion of rational to bfloat is inaccurate 2913614: LAPACK: dgesvd is broken 2911891: gcfac gives Lisp error 2910437: non-repeatable beta_incomplete(1b0,1,z) 2910001: optimization of bfloat input 2909980: optimization for log of bfloats 2909917: documentation type -- jornan 2907952: diff of a taylor series 2907815: sold variable in diag(x) (package diag) should be local 2907727: Incorrect Integral with option integrate_use_rootsof 2892710: Allow easier library access 2880797: bad answer in integrate(sqrt(sin(t)^2+cos(t)^2),t,0,2*%pi) 2875784: fourier integral incorrect 2859856: csign(log(x)) --> pnz 2852992: sqrt(-1/x)-%i/sqrt(x) not zero 2843621: GosperSum error 2808861: list function arguments with mode_declare in translate 2786017: realonly in algsys.lisp 2607007: legend does not work 1869296: hgfred([1,2],[6],1) bogus 1857562: hgfred([a,b],[c], 0) -/--> 1 1633149: sum bug that never happens 1620165: assoc needs to check argument, was: Strange error 1531688: hgfred([ ], [ ], 0) 1440286: documentation for 'listofvars' 1440069: euler numbers & zerobern 1376392: limit(x/(2+sin(1/x)), x, 0); wrong result 1372264: no user doc for 'numer_pbranch' 1219846: properties of translated functions 1106912: limit(x/sin(x)^2,x,inf) 1010768: sqrt(1/z) - 1/sqrt(z) => 0 932095: ode2 redundant asksign 910270: 1/+3*x parses as 1/(+3*x) 903166: assume works for real values only 900860: Simplifications involving abs 893633: depends(a,[b,b,b]) 856209: inconsistency between facts() and facts(v) 840848: trigreduce doesn't enter unknown functions 811522: redundant question in limit 781657: binomial(x,x) => 1, but binomial(-1,-1) => 0 777564: subtraction \"-\"(a,b) should work/FIX 776441: orderlessp not transitive 767556: Distributing operations over = 767528: op(box(a)) bogus 752417: KEEPFLOAT:TRUE ignored by SOLVE 719968: No SIMP function 710307: orderlessp of bfloat, %e, and inf 660876: taylor and keepfloat ERR 655270: Incomplete integration 643254: orderlessp([rat(x)], [rat(x)]) 593351: limit/sin(inf)etc. should give 0, not IND
2010-05-06Changes 2.11.0:adam6-180/+36
* Packages must have been installed under R >= 2.10.0, as the current help system is the only one now supported. * A port to 64-bit Windows is now available as well as binary package repositiories: see the 'R Administration and Installation Manual'. * Argument matching for primitive functions is now done in the same way as for interpreted functions except for the deliberate exceptions call switch .C .Fortran .Call .External all of which use positional matching for their first argument, and also some internal-use-only primitives. * The default device for command-line R at the console on Mac OS X is now quartz() and not X11(). New features * The 'open' modes for connections are now interpreted more consistently. * R CMD INSTALL now uses the internal untar() in package utils. * help(try.all.packages = TRUE) is much faster. * R CMD check has a new option '--timings' to record per-example timings in file <pkg>.Rcheck/<pkg>-Ex.timings. * The TRE library has been updated to version 0.8.0 (minor bugfixes). More...
2010-05-04teapot is a spread sheet program for UNIX, which uses modern conceptshauke5-0/+92
besides being portable and extensible, for instance three dimensional tables and iterative expressions. The most important feature is the funktional addressing of cells, unlike the traditional approach like A0, C5, etc. which is probably inherited from VisiCalc.
2010-05-04Add teapot, a CLI spreadsheet application.hauke1-1/+2
2010-04-28update to 1.10.2drochner3-9/+12
changes: -improvements to ODF support -UI improvements -bugfixes -documentation updates
2010-04-25Don't hardcode Python version number. This fixes the build with Python 2.6.tron1-2/+2
2010-04-24Use BSD_INSTALL_LIB to install shared objects.asau2-12/+14
Rediscovered by Taylor R. Campbell in PR 43205
2010-04-24Update to 1.4.1.gls3-10/+9
From Wen Heping in PR pkg/43204. This minor release removes datetime support, which fixes the binary incompatibility issues with SciPy and other packages. It also includes several bug fixes. No new features are introduced. Bugs fixed ---------- - #1336: Fix for 1299 exposes Bus error on Sparc - #1379: CPU ID not set correctly on PARISC - #1388: frombuffer calls PyErr_Format without throwing an error - log1p - kaiser for M=1 - paver execution on Windows 7 for Python 2.6 - several fixes to Chebyshev and Polynomial
2010-04-17remove broken http mirror.zafer1-3/+2
2010-04-13update to 0.9.7drochner4-45/+13
changes: General build updates and bug fixes, including the ability to build against cln >= 1.2
2010-04-13update to 0.9.7drochner6-111/+20
changes: -General build updates and bug fixes -Bug fix for segfaults with some uses of integrate() -New Simplified Chinese translation -Fix crash with unsupported operator in RPN syntax -Fix reduction of vector size
2010-04-13update to 1.3.1drochner2-7/+6
This release fixes a crash in double_approx(cl_RA) on 64-bit platforms and adds basic support for Renesas SH (sh4).
2010-03-31Update ruby-rb-gsl package to 1.14.3.taca4-39/+28
Mon Mar 22 23:54:07 MDT 2010 * GSL-1.14 support * Added GSL::Multiset class * Added GSL::Function#glfixed(a, b table) Sun Aug 16 19:01:31 BOT 2009 * Added Non-negative Matrix Factorization (NMF) support (by Roman Shterenzon) Sat Aug 8 22:36:24 BOT 2009 * Added GSL-1.13 features: * Added GSL::Monte::Miser#params_get, GSL::Monte::Vegas#params_get * Added GSL::BSpline::greville_abscissa(i) * Added GSL::Poly#eval_derivs(x) * Added a new minimization algorithm "quad_golden" * Added a new multimin algorithm "nmsimplex2rand" Tue Jun 9 10:42:30 JST 2009 * Fixed bug in linalg.c (bug [#25842]) Thu Feb 2 12:16:38 JST 2009 * Fixed a bug in GSL::Histogram.alloc_uniform() (bug [#23040]) * Fixed a bug in GSL::Vector#/ (bug [#23334]) Thu Nov 6 17:34:18 JST 2008 * Match with the tensor extension version 0.99 * now not compatible for the versions older than tensor-0.97. Sat Jul 26 08:23:45 JST 2008 * GSL::Poly.eval now handles complex numbers (GSL-1.11) * Added new quasi-random generators "halton" and "reversehalton" * Added a module function GSL::MultiFit::linear_residuals() (GSL-1.11) * Fixed a bug in ODE solver Mon Jun 30 22:07:24 JST 2008 * Fixed GSL::Vector#normalize (#20865) Mon May 26 19:21:15 JST 2008 * Fixed a bug in GSL::Matrix::to_v (#19757) * Fixed a bug in GSL::Vector::Int multiplication (#19924)
2010-03-24Recursive revision bump for GMP update, 2nd part.asau4-7/+8
2010-03-24Recursive revision bump for GMP update.asau12-16/+24
2010-03-20Take MAINTAINER.schmonz1-2/+2
2010-03-20DESTDIR support.schmonz3-9/+49
2010-03-18Remove two constants that are not defined by gsl any longer (since 1.13).wiz3-2/+25
Fixes build, but bump PKGREVISION anyway since there were some packages with this version that did build. Set LICENSE.
2010-03-18+ ksegasau1-1/+2
2010-03-17Detect if the fortran compiler/libs have etime as an intrinsic or not insteaddmcmahill4-7/+46
of hard coding it. This package builds with both f2c and gfortran now.
2010-03-16Updating math/p5-Spreadsheet-Read from 0.38 to 0.39sno2-9/+9
pkgsrc changes: - Adjust dependencies Upstream changes: 0.39 Tue 16 Mar 2010 - Doc fix (RT#54507, Patrick Cronin) - Upped Copyright notices to 2010 - Drop YAML version to 1.0
2010-03-16add and enable itppagc1-1/+2
2010-03-16initial import of itpp-4.0.7 into the packages collectionagc4-0/+159
C++ library of mathematical, signal processing and communication routines Its main use is in simulation of communication systems and for performing research in the area of communications. The kernel of the library consists of generic vector and matrix classes, and a set of accompanying routines. Such a kernel makes IT++ similar to MATLAB or GNU Octave.
2010-03-15Update to 1.14:wiz3-7/+8
* What is new in gsl-1.14: ** Upgraded to latest libtool, autoconf and automake (libtool-2.2.6b, autoconf-2.65, automake-1.11.1). Fixes security hole in 'make dist' (see Automake CVE-2009-4029). ** Added support for "multisets", which are similar to permutations and combinations. A multiset is an array of k integers in the range 0 to n-1 where each value may occur more than once. Multisets can be used to iterate over the indices of a k-th order symmetric tensor in n-space. (Rhys Ulerich) ** Added gsl_integrate_glfixed routines for performing fixed order Gauss-Legendre integration (Pavel Holoborodko, Konstantin Holoborodko, Rhys Ulerich) ** In the LMDER multi-dimensional fitting routines, the return code GSL_ENOPROG is now used instead of GSL_CONTINUE for the case where 10 or more attempts to find a suitable trial step have been made without success. [bug #25383] ** The confluent hypergeometric function gsl_sf_hyperg_U (a,b,x) has been extended to support x < 0 for cases not involving singularities in 1F1(a,b,x). [bug #27859] ** The F-distribution gsl_ran_fdist_pdf now avoids unnecessary underflow and overflow and handles cases where n > 248. [bug #28500] ** The SVD routines now use a scaled version of the implicit QR method and compute the shift more reliably for values at the limit of double precision, avoiding potential NaNs. [bug #28767] ** A compile time error is emitted if the configuration stage prevents the functions gsl_isnan and gsl_finite from being defined. ** Added missing dereference in GSL_VECTOR_COMPLEX when not using GSL_RANGE_CHECK [bug #28017] ** Improved the range of gsl_sf_hyperg1F1(a,b,x) when a<0,b>0. [bug #28718] ** Added macros GSL_MAJOR_VERSION and GSL_MINOR_VERSION in <gsl/gsl_version.h> ** Improved gsl_eigen_symmv and gsl_eigen_symm to avoid a potential infinite loop when the tridiagonalised matrix contains very small values. [bug #28096] ** Added functions gsl_multifit_linear_usvd and gsl_multifit_wlinear_usvd for multilinear fitting without column-scaling of the fit matrix.
2010-03-14Set PREV_PKGPATH.wiz1-1/+3
2010-03-14Reimport misc/kseg into better matching category.wiz5-0/+124
2010-03-13Add a "doc" option (on by default) to control whether the documentationschmonz6-50/+68
is rendered and installed. Disabling the option is helpful e.g. for web servers supporting OpenID logins, where X and TeX aren't present. Bump PKGREVISION.
2010-03-13De-fuzz patch.schmonz2-6/+9
2010-03-10Updating math/p5-Excel-Template-Plus from 0.04nb1 to 0.05sno2-14/+15
pkgsrc changes: - Add license definition - Adjust dependencies Upstream changes: 0.05 Mon. Feb 22, 2010 - updates copyright on all files * Test::Excel::Template::Plus - Fixing some test failures because of an internals change in Spreadsheet::ParseExcel - thanks to Chris Travers
2010-03-10Updating math/p5-Math-Pari from 2.010806.03 to 2.010806.04sno3-38/+36
pkgsrc changes: - Adjust patch which allows to use math/pari Upstream changes: 2.01080604 Add (missing in 2.1.*) declaration for pari_init(). Minor miscount in docs. Math::PariBuild: detecting `patch --binary' missed -p1; same for inc_h.diff Work around bug in XSUB.h (at least up to 5.11.2) with puts. Get GPDATADIR from gp, if present. Make self-documentation for switching to 2.3.* more explicit. kmx patch for mingw 32-bit Win-build: include windows.h (early!) in Pari.xs and highlvl.c enable assembler for this build x86_64 assembler detection after 2.2.7; thanks to Alexander Haeckel
2010-03-09Remove a zero size patch file.taca2-2/+1
2010-03-03deal with hicolor-item-theme cache, from Robert Elz per PR pkg/42898drochner1-1/+2
2010-03-03Update py-networkx to 1.0.1.obache3-196/+201
Based on PR#42834 by Wen Heping. Update MASTER_SITES, set LICENSE=modified-bsd, 3-caulse BSD. ====================================================================== Networkx-1.0.1 Release date: 11 Jan 2010 See: https://networkx.lanl.gov/trac/timeline Bug fix release for missing setup.py in manifest. ====================================================================== Networkx-1.0 Release date: 8 Jan 2010 See: https://networkx.lanl.gov/trac/timeline New features This release has sigificant changes to parts of the graph API to allow graph, node, and edge attributes. See http://networkx.lanl.gov//reference/api_changes.html * Update Graph, DiGraph, and MultiGraph classes to allow attributes. * Default edge data is now an empty dictionary (was the integer 1) * Difference and intersection operators * Average shortest path * A* (A-Star) algorithm * PageRank, HITS, and eigenvector centrality * Read Pajek files * Line graphs * Minimum spanning tree (Kruskal¡Çs algorithm) * Dense and sparse Fruchterman-Reingold layout * Random clustered graph generator * Directed scale-free graph generator * Faster random regular graph generator * Improved edge color and label drawing with Matplotlib * and much more, see https://networkx.lanl.gov/trac/query?status=closed&group=milestone&milestone=networkx-1.0 Examples * Update to work with networkx-1.0 API * Graph subclass example ====================================================================== Networkx-0.99 Release date: 18 November 2008 See: https://networkx.lanl.gov/trac/timeline New features¢ù This release has sigificant changes to parts of the graph API. See http://networkx.lanl.gov//reference/api_changes.html * Update Graph and DiGraph classes to use weighted graphs as default Change in API for performance and code simplicity. * New MultiGraph and MultiDiGraph classes (replace XGraph and XDiGraph) * Update to use Sphinx documentation system http://networkx.lanl.gov/ * Developer site at https://networkx.lanl.gov/trac/ * Experimental LabeledGraph and LabeledDiGraph * Moved package and file layout to subdirectories. Bug fixes * handle root= option to draw_graphviz correctly Examples * Update to work with networkx-0.99 API * Drawing examples now use matplotlib.pyplot interface * Improved drawings in many examples * New examples - see http://networkx.lanl.gov/examples/
2010-02-26Reset maintainer for developers who gave back their commit bit.wiz8-16/+16
2010-02-25Do not change localedir.wiz2-12/+3
2010-02-25Use the correct libtool archive for linkage.joerg2-1/+33
2010-02-24+ prng.wiz1-1/+2
2010-02-23Updating math/p5-Spreadsheet-WriteExcel from 2.36 to 2.37sno2-6/+6
Upstream changes: 2.37 February 2 2010 - Minor + Added set_chartarea() and set_plotarea() methods to set chart and plot background colours and border lines. ! Fixed bug where embedded charts gave "Data may be lost" warning. Reported by Andreas Strobitzer. ! Fixed issue where set_properties() didn't work with ::Big. Marked ::Big as deprecated in the docs in favour of using Spreadsheet::WriteExcel directly. Removed WorkbookBig.pm.
2010-02-21Set LICENSE to modified-bsd.wiz1-1/+2
2010-02-19Default x11 option to on (should have been done this way in previous).schmonz2-4/+4
Bump PKGREVISION.
2010-02-19Initial import of prng-3.0.2, packaged for wip by Wen Heping.wiz4-0/+35
PRNG is a collection of portable, high-performance ANSI-C implementations of pseudorandom number generators such as linear congruential, inversive congruential, and explicit inversive congruential random number generators (LCG, ICG and EICG, respectively) created by Otmar Lendl and Josef Leydold.
2010-02-19Make x11 support optional, default off. Bump PKGREVISION.schmonz2-10/+17
2010-02-18+gnumeric110drochner1-1/+2
2010-02-18add gnumeric-1.10.0 which is the first of a new release branch,drochner6-0/+1016
while it is an official stable release it is still .0 so better keep 1.8 in parallel (first impression: it lacks its desktop icon)
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