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2010-03-15Update to 1.14:wiz3-7/+8
* What is new in gsl-1.14: ** Upgraded to latest libtool, autoconf and automake (libtool-2.2.6b, autoconf-2.65, automake-1.11.1). Fixes security hole in 'make dist' (see Automake CVE-2009-4029). ** Added support for "multisets", which are similar to permutations and combinations. A multiset is an array of k integers in the range 0 to n-1 where each value may occur more than once. Multisets can be used to iterate over the indices of a k-th order symmetric tensor in n-space. (Rhys Ulerich) ** Added gsl_integrate_glfixed routines for performing fixed order Gauss-Legendre integration (Pavel Holoborodko, Konstantin Holoborodko, Rhys Ulerich) ** In the LMDER multi-dimensional fitting routines, the return code GSL_ENOPROG is now used instead of GSL_CONTINUE for the case where 10 or more attempts to find a suitable trial step have been made without success. [bug #25383] ** The confluent hypergeometric function gsl_sf_hyperg_U (a,b,x) has been extended to support x < 0 for cases not involving singularities in 1F1(a,b,x). [bug #27859] ** The F-distribution gsl_ran_fdist_pdf now avoids unnecessary underflow and overflow and handles cases where n > 248. [bug #28500] ** The SVD routines now use a scaled version of the implicit QR method and compute the shift more reliably for values at the limit of double precision, avoiding potential NaNs. [bug #28767] ** A compile time error is emitted if the configuration stage prevents the functions gsl_isnan and gsl_finite from being defined. ** Added missing dereference in GSL_VECTOR_COMPLEX when not using GSL_RANGE_CHECK [bug #28017] ** Improved the range of gsl_sf_hyperg1F1(a,b,x) when a<0,b>0. [bug #28718] ** Added macros GSL_MAJOR_VERSION and GSL_MINOR_VERSION in <gsl/gsl_version.h> ** Improved gsl_eigen_symmv and gsl_eigen_symm to avoid a potential infinite loop when the tridiagonalised matrix contains very small values. [bug #28096] ** Added functions gsl_multifit_linear_usvd and gsl_multifit_wlinear_usvd for multilinear fitting without column-scaling of the fit matrix.
2010-03-14Set PREV_PKGPATH.wiz1-1/+3
2010-03-14Reimport misc/kseg into better matching category.wiz5-0/+124
2010-03-13Add a "doc" option (on by default) to control whether the documentationschmonz6-50/+68
is rendered and installed. Disabling the option is helpful e.g. for web servers supporting OpenID logins, where X and TeX aren't present. Bump PKGREVISION.
2010-03-13De-fuzz patch.schmonz2-6/+9
2010-03-10Updating math/p5-Excel-Template-Plus from 0.04nb1 to 0.05sno2-14/+15
pkgsrc changes: - Add license definition - Adjust dependencies Upstream changes: 0.05 Mon. Feb 22, 2010 - updates copyright on all files * Test::Excel::Template::Plus - Fixing some test failures because of an internals change in Spreadsheet::ParseExcel - thanks to Chris Travers
2010-03-10Updating math/p5-Math-Pari from 2.010806.03 to 2.010806.04sno3-38/+36
pkgsrc changes: - Adjust patch which allows to use math/pari Upstream changes: 2.01080604 Add (missing in 2.1.*) declaration for pari_init(). Minor miscount in docs. Math::PariBuild: detecting `patch --binary' missed -p1; same for inc_h.diff Work around bug in XSUB.h (at least up to 5.11.2) with puts. Get GPDATADIR from gp, if present. Make self-documentation for switching to 2.3.* more explicit. kmx patch for mingw 32-bit Win-build: include windows.h (early!) in Pari.xs and highlvl.c enable assembler for this build x86_64 assembler detection after 2.2.7; thanks to Alexander Haeckel
2010-03-09Remove a zero size patch file.taca2-2/+1
2010-03-03deal with hicolor-item-theme cache, from Robert Elz per PR pkg/42898drochner1-1/+2
2010-03-03Update py-networkx to 1.0.1.obache3-196/+201
Based on PR#42834 by Wen Heping. Update MASTER_SITES, set LICENSE=modified-bsd, 3-caulse BSD. ====================================================================== Networkx-1.0.1 Release date: 11 Jan 2010 See: https://networkx.lanl.gov/trac/timeline Bug fix release for missing setup.py in manifest. ====================================================================== Networkx-1.0 Release date: 8 Jan 2010 See: https://networkx.lanl.gov/trac/timeline New features This release has sigificant changes to parts of the graph API to allow graph, node, and edge attributes. See http://networkx.lanl.gov//reference/api_changes.html * Update Graph, DiGraph, and MultiGraph classes to allow attributes. * Default edge data is now an empty dictionary (was the integer 1) * Difference and intersection operators * Average shortest path * A* (A-Star) algorithm * PageRank, HITS, and eigenvector centrality * Read Pajek files * Line graphs * Minimum spanning tree (Kruskal¡Çs algorithm) * Dense and sparse Fruchterman-Reingold layout * Random clustered graph generator * Directed scale-free graph generator * Faster random regular graph generator * Improved edge color and label drawing with Matplotlib * and much more, see https://networkx.lanl.gov/trac/query?status=closed&group=milestone&milestone=networkx-1.0 Examples * Update to work with networkx-1.0 API * Graph subclass example ====================================================================== Networkx-0.99 Release date: 18 November 2008 See: https://networkx.lanl.gov/trac/timeline New features¢ù This release has sigificant changes to parts of the graph API. See http://networkx.lanl.gov//reference/api_changes.html * Update Graph and DiGraph classes to use weighted graphs as default Change in API for performance and code simplicity. * New MultiGraph and MultiDiGraph classes (replace XGraph and XDiGraph) * Update to use Sphinx documentation system http://networkx.lanl.gov/ * Developer site at https://networkx.lanl.gov/trac/ * Experimental LabeledGraph and LabeledDiGraph * Moved package and file layout to subdirectories. Bug fixes * handle root= option to draw_graphviz correctly Examples * Update to work with networkx-0.99 API * Drawing examples now use matplotlib.pyplot interface * Improved drawings in many examples * New examples - see http://networkx.lanl.gov/examples/
2010-02-26Reset maintainer for developers who gave back their commit bit.wiz8-16/+16
2010-02-25Do not change localedir.wiz2-12/+3
2010-02-25Use the correct libtool archive for linkage.joerg2-1/+33
2010-02-24+ prng.wiz1-1/+2
2010-02-23Updating math/p5-Spreadsheet-WriteExcel from 2.36 to 2.37sno2-6/+6
Upstream changes: 2.37 February 2 2010 - Minor + Added set_chartarea() and set_plotarea() methods to set chart and plot background colours and border lines. ! Fixed bug where embedded charts gave "Data may be lost" warning. Reported by Andreas Strobitzer. ! Fixed issue where set_properties() didn't work with ::Big. Marked ::Big as deprecated in the docs in favour of using Spreadsheet::WriteExcel directly. Removed WorkbookBig.pm.
2010-02-21Set LICENSE to modified-bsd.wiz1-1/+2
2010-02-19Default x11 option to on (should have been done this way in previous).schmonz2-4/+4
Bump PKGREVISION.
2010-02-19Initial import of prng-3.0.2, packaged for wip by Wen Heping.wiz4-0/+35
PRNG is a collection of portable, high-performance ANSI-C implementations of pseudorandom number generators such as linear congruential, inversive congruential, and explicit inversive congruential random number generators (LCG, ICG and EICG, respectively) created by Otmar Lendl and Josef Leydold.
2010-02-19Make x11 support optional, default off. Bump PKGREVISION.schmonz2-10/+17
2010-02-18+gnumeric110drochner1-1/+2
2010-02-18add gnumeric-1.10.0 which is the first of a new release branch,drochner6-0/+1016
while it is an official stable release it is still .0 so better keep 1.8 in parallel (first impression: it lacks its desktop icon)
2010-02-15Deal with two digit R --version output. Still mark as broken because itjoerg3-5/+7
depends on a no-longer existing header.
2010-02-12Bumping revision to force rebuild after missing declaration has been fixedsno1-2/+3
in math/pari.
2010-02-12Updating math/pari from 2.3.5 to 2.3.5nb1sno4-11/+21
- Math::Pari requires one more function declaration from src/language/anal.h (moved into src/headers/paripriv.h, too)
2010-02-12Update to Octave 3.2.4, this is bug fixing release.asau5-16/+15
pkgsrc changes: fix shared library versions.
2010-02-10Bump revision for PYTHON_VERSION_DEFAULT change.joerg1-2/+2
2010-02-09Changes 2.10.1:adam3-9/+8
* The PCRE library has been updated to version 8.00. * R CMD INSTALL has new options --no-R, --no-libs, --no-data, --no-help, --no-demo, --no-exec, and --no-inst to suppress installation of the specified part of the package. * The documented line-length limit of 4095 bytes when reading from the console now also applies also to parse(file="") (which previously had a limit of around 1024 bytes). * A Bioconductor mirror can be set for use by setRepositories() via the option "BioC_mirror". * Double-clicking in a tk_select.list() list box now selects the item and closes the list box (as happens on the Windows select.list() widget). * configure will be able to find a usable libtiff in some rare circumstances where it did not previously (where libtiff needed to be linked explicitly against -ljpeg). * Making refman.pdf works around a problem with the indexing with hyperref 6.79d and later. * The 'extended' argument is deprecated in strsplit(), grep(), grepl(), sub(), gsub(), regexpr() and gregexpr() (not just the value extended = FALSE) and will be removed in R 2.11.0. * bug fixes
2010-02-08Update py-mpmath to 0.14.obache3-59/+132
per update request from Wen Heping by PR#42755. Pkgsrc changes: * Set LICENSE * correct EOL style of installed files * Add self-test target Changes: --0.14-- Released February 5, 2010 General changes: * Fully separated the code into "low-level" and "high-level", permitting the use of alternative contexts (the mpmath.mp object provides the default implementation) * Implemented a context for fast double-precision arithmetic using Python types (mpmath.fp) * Implemented hooks for importing a faster version of mp arithmetic from Sage * Implemented optimized fp versions of certain functions (including erf, erfc, gamma, digamma, ei, e1) * Renamed and reorganized various internal modules and methods (including merging low-level modules into mpmath.libmp). This should not affect most external code using top-level imports. Plotting: * Implemented splot() for 3D surface plots (contributed by Jorn Baayen) * Permit calling plot functions with custom axes (contributed by Jorn Baayen) Matrices: * Fixed lu_solve for overdetermined systems (contributed by Vinzent Steinberg) * Added conjugate matrix transpose (contributed by Vinzent Steinberg) * Implemented matrix functions (expm, cosm, sinm, sqrtm, logm, powm) Miscellaneous: * Prettier printing of numbers with leading zeros at small precisions * Made nstr pass on kwargs, permitting more formatting options * Fixed wrong directed rounding of addition of numbers with large magnitude differences * Fixed several docstring typos (contributed by Chris Smith) * Fixed a bug that prevented caching of quadrature nodes to work optimally. Special functions: * Implemented fast evaluation for large imaginary heights of the Riemann zeta function, Z function and derived functions using the Riemann-Siegel (contributed by Juan Arias de Reyna) * Unified the zeta() and hurwitz() functions, automatically selecting a fast algorithm * Improved altzeta() to fall back to zeta() for large arguments * Fixed accuracy of zeta(s) for s ~= 1 * Implemented exact evaluation of Euler numbers (contributed by Juan Arias de Reyna) * Implemented numerical evaluation of Euler numbers and Euler polynomials (eulernum(), eulerpoly()) * Fixed bernpoly() and eulerpoly() to compute accurate values for large parameters * Fixed accuracy problems for hypergeometric functions with large parameters * Faster evaluation of hypergeometric series using on-the-fly code generation * Optimized hypercomb to detect certain zero terms symbolically * Removed the djtheta function (jtheta() accepts a derivative parameter) * Implemented li(x, offset=True) to compute the offset logarithmic integral * Fixed wrong branch in Lambert W function for certain complex inputs * Implemented the reflection formula for the Barnes G-function, superfactorials, hyperfactorials, permitting large arguments in the left half-plane * Implemented analytic continuation to |z| >= 1 for hypergeometric functions pFq with p=q+1; added hyp3f2() * Implemented Borel summation of divergent pFq functions with p > q+1 * Implemented automatic degree reduction of hypergeometric functions with repeated parameters * Added convenience functions expj(), expjpi() * Use Mathematica's convention for the continuation of the Meijer G-function * Added phase(), polar(), rect() functions for compatibility with the Python 2.6 cmath module * Implemented spherical harmonics (spherharm()) * Optimized ci(), si(), chi(), shi() for complex arguments by evaluating them in terms of ei() * Optimized hyp2f1 for z ~= -1
2010-02-07add license.zafer1-3/+3
2010-02-06Update pear-Numbers_Words from 0.14.0 to 0.16.1.taca2-7/+6
0.16.1 * Clean up package definition and tests; * Better cast/sanitation of non-integer values; * Fixed bug #16019 (incorrect trimming of vowels in the Italian extension). 0.16.0 * Added numerous language unit tests (Bulgarian, English 100, English GB, English US, French, French Belgium, German, Italian, Portuguese Brazilian); * Swap all tests to PHPUnit 3; * Bugs fixed: - #10744 wrong getLocales() Docblock; - #14988 bogus non-int parsing; - #14667 bad trascription for 101 numbers and 102 thousands bug; - incorrect values for 80 and 81 in French Belgium; - #15260 uninitialized string offset in Brazilian Portuguese. 0.15.0 * New file for Dutch language (Thanks to WHAM van Dinter); * package.xml updated to version 2.0; * Bugs fixed: - #5618 locale name (and file name) for Estonian is changed from ee to et; - #6654 bug in Russian translation; * New feature added: - #7339 new Numbers_Words::getLocales() method is available (Thanks to Bertrand Gugger).
2010-02-06Updaet pear-Numbers_Roman from 0.2.0 to 1.0.2.taca2-7/+6
1.0.2 QA release: - Fix bug with _L and _C giving wrong values (swapped) - Fix bug: toRoman() used $this although it's static - Add unit tests 1.0.1 - Added support for lowercase input/output - Starting with this release conversion is supported from integers up to 5 999 999 and from the equivalent Roman Numerals - Added an optional HTML tag to disply roman numerals over 4000 in an historically accurate fashion - General fixes and code rewrite maintaining backward compatibility
2010-02-06Updating math/p5-Math-Pari from 2.010801nb2 to 2.010806.03sno7-119/+293
pkgsrc changes: - Avoid private compile of pari-library, use pkgsrc provided instead - Add license definition - Disabled support for plotting from perl (missing upstream support) Upstream changes: 2.01080601+ Add 5.005-new keywords to Makefile.PL. Consistently put space after -I in C include paths (needed???). Nicer output when debugging faulty LWP and Net::FTP. Make test engine look in */32/* directory too on 64-bit builds. Remove POD ornaments to make ABSTRACT_FROM work. 2.01080601++ Reword warning about slow intnum: only 75% longer than on PARI/GP. (overhead of the internal sub call in subtest 30 looks like 10x overhead of an empty subroutine call). New advice that upgrade to 2.3.* may fix `overflow' and `highremainder'. Exchange order of initialization of PARI and of `functions_highlevel' with >= 2.3.0; allows installation of highlevel functions (in particular, install() and PostScript printing). New function have_graphics() (not exported). The test engine takes into account have_graphics(). 2.01080602 If AUTOMATED_TESTING, delete (bogus?) environment variable DISPLAY. If AUTOMATED_TESTING, report results of failing tests on STDERR. Make test suite report rough run times for successful subtests. 2.01080603 Fix misprint and change die() to warn() on failure of $ftp->quit... Add some void's in Pari.xs. UNDONE (wrong): Protect init_graph() by NO_GRAPHICS_PARI (in restart code); include rect.h instead... sv2pari(),sv2parimat(): a stupid compiler might guess we don't return value... when patching, use && instead of ; in the shell command New function Math::PariBuild::patch_args() Math::PariBuild::patch_pari() supports option --binary, \ as directory separator in command processor. Make uname parser recognize i686-pc as ix86. Generator of function descriptors could try to regenerate existing file. nok_print() in Testout.pm was defined too late.
2010-02-06Updating math/pari from 2.1.6nb3 to 2.3.5 (newer than PR pkg/38116)sno23-1072/+915
pkgsrc changes: - Adding license (GPLv2) - Adding X11 and GMP support (latter via option) - Adding patches to support math/p5-Math-Pari can be build without rebuilding pari again Upstream changes: * Primarily a lot of bug fixes * Plotting API reworked * More targets are supported
2010-02-04DESTDIR supportjoerg5-19/+30
2010-02-03+ wxMaxima.wiz1-1/+2
2010-02-03+ 2 calculatorsdrochner1-1/+3
2010-02-03add speedcrunch-0.10.1, another desktop calculatordrochner5-0/+359
2010-02-03add extcalc-0.9.2, another desktop calculatordrochner6-0/+147
(I had this in my tree for a while but found the UI too complex to be handled intuitively. But now it appeared on a list of "the 7 best Linux calculators", so perhaps it is just me...)
2010-01-30Added LICENSE information.heinz2-2/+4
2010-01-27update to 1.4.0drochner3-22/+102
changes: - Faster import time - Extended array wrapping mechanism for ufuncs - New Neighborhood iterator (C-level only) - C99-like complex functions in npymath, and a lot of portability fixes for basic floating point math functions
2010-01-27update to 0.6.6drochner4-27/+156
many fixes and improvements, too much to list here
2010-01-27+py-mpmathdrochner1-1/+2
2010-01-27add py-mpmath-0.13, a Python library for arbitrary-precision FP arithmeticdrochner4-0/+179
2010-01-25Update p5-Spreadsheet-WriteExcel from version 2.35 to version 2.36.seb2-7/+7
Pkgsrc changes: - Adjust dependencies. Upstream changes: 2.36 January 21 2010 - Minor ! Fix for bug that gave a name conflict error for repeat rows and autofilters in some non-English versions of Excel. http://rt.cpan.org/Public/Bug/Display.html?id=38099 ! Fixed tab selection for Charts. + Added xl_range_formula() to Spreadsheet::WriteExcel::Utility to help with creating chart ranges. Added example to Chart docs. + Added set_legend() method with initial legend formatting options. + Documented Worksheet methods that are applicable to Charts.
2010-01-25Update p5-Spreadsheet-Read from version 0.37 to version 0.38.seb2-8/+10
Pkgsrc changes: - Adjust dependencies Upstream changes: 0.38 Tue 15 Dec 2009 - Add row () and cellrow () - Updated META.yml to meet most recent specs (optional_features = map)
2010-01-24Update from version 0.5500 to version 0.5700 (upstream 0.57)seb2-8/+7
Pkgsrc changes: - Adjust dependencies. - Change PERL5_MODULE_TYPE to MakeMaker. Upstream changes: 0.57 January 24 2010 ! Added fix for reading formatted data from Excel 4 files. ! Added example programs, a_simple_parser.pl and display_text_table.pl. ! Removed Build.PL from README. Thanks Ed Avis. https://rt.cpan.org/Ticket/Display.html?id=52670 0.56 November 9 2009 + Added error() and error_code() error handling routines. This allows encrypted files to be ignored. Added t/10_error_codes.t for the above methods. http://rt.cpan.org/Public/Bug/Display.html?id=51033 http://rt.cpan.org/Public/Bug/Display.html?id=47978 ! Made version 0.19 of OLE::Storage_Lite a prerequisite to avoid issues when writing OLE header in SaveParser.
2010-01-23Don't depend on accidental line buffering.is3-3/+28
2010-01-23Make "make test" less confusing (stdout/stderr reordering issue).is3-2/+17
2010-01-23Update to FriCAS 1.0.9asau4-31/+21
Notable changes (compared to version 1.0.8) include: - Speed improvements to polynomial multiplication, power series multiplication, guessing package and coercion of polynomials to expressions. - Domains for tensor products. - 'Complex(Integer)' is now UniqueFactorizationDomain. - Types in interpreter are now of type 'Type' (instead of 'Domain') and categories in interpreter are of type 'Category' (instead of 'Subdomain(Domain)'). - Interpreter functions can now return 'Type'. - New function for files: 'flush'. - Spad compiler: return in nested functions and nested functions returning functions. Bug fixes, in particular: - Several fixes to guessing package. - Avoid crash when unparsing equations. - Equation solver accepts more solutions. - Fixed handling of 'Tuple' in Spad parser. - Fixed miscompilation of record constructor by Spad compiler.
2010-01-21Upgrade to new upstream version. While here, add a test target.is3-10/+20
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