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2021-01-26math/ruby-spreadsheet: update to 1.2.7taca3-19/+16
1.2.7 (2021-01-20) * Remove .travis.ci, hoe, obsolete Warning * Added GithubActions
2021-01-24qhull: Remove an unused patchryoon1-40/+0
2021-01-23revbump for qhullgdt1-2/+2
2021-01-23qhull: Update to 2020.2gdt3-74/+59
pkgsrc changes: Remove non-installed examples with non-POSIX sh constructs. What would be in upstream NEWS: Qhull 2020.2 enhances the C++ interface with QhullUser and support for Voronoi diagrams. Qhull 2020.1 makes minor API changes
2021-01-23Revbump all Go packages after go115 updatebsiegert2-4/+4
2021-01-14qalculate: Explicitly use std::queue.jperkin2-1/+17
2021-01-14sortjnemeth1-2/+2
2021-01-13Add kalkpin1-1/+2
2021-01-13math/kalk: import packagepin5-0/+310
Kalk is a calculator (both program and library) that supports user-define variables, functions, and units (experimental).
2021-01-09py-numpy: updated to 1.19.5adam2-7/+7
1.19.5: BUG: Fix segfault due to out of bound pointer in floatstatus... BUG: fix np.timedelta64('nat').__format__ throwing an exception BUG: Fixed file handle leak in array_tofile. BUG: Raise recursion error during dimension discovery BUG: Fix subarray dtype used with too large count in fromfile BUG: 'bool' object has no attribute 'ndim' BUG: ensure _UFuncNoLoopError can be pickled BLD: use BUFFERSIZE=20 in OpenBLAS BLD: update to OpenBLAS 0.3.13 BUG: make a variable volatile to work around clang compiler bug REL: Prepare for the NumPy 1.19.5 release.
2021-01-09(math/R) Ignore the warnings from autoreconfmef1-2/+2
2021-01-07erfa: fix HOMEPAGE.wiz1-2/+2
2021-01-04fftw*: update to 3.3.9wiz4-14/+13
FFTW 3.3.9: * New API fftw_planner_nthreads() returns the number of threads currently being used by the planner. * Fix incorrect math in 128-bit generic SIMD * Fix wisdom for avx512. The avx512 alignment requirement was set to 64 bytes, but this is wrong. Alignment requirements are a property of the platform (e.g., x86) and not of the instruction set (e.g., AVX). Among other things, this broke wisdom with avx512. Note that avx512 support is still experimental because the FFTW authors have no avx512 hardware available for testing. * fftw_threads_set_callback function to change the threading backend at runtime.
2021-01-03(math/R-classInt) Updated 0.4.2 to 0.4.3, ChangeLog not updated (?)mef2-7/+10
2021-01-03(math/R-chron) Updated 2.3.53 to 2.3.56mef2-8/+7
2020-08-18 Kurt Hornik <Kurt.Hornik@wu.ac.at> * DESCRIPTION: New version is 2.3-56. * R/zzz.R: Drop .onAttach(). * R/y2k.R: * man/chron-internal.Rd: Changed the default cutoff when expanding a 2-digit year to a 4-digit year from 30 to 69 (as for Date and POSIXct in base R.) 2020-02-02 Kurt Hornik <Kurt.Hornik@wu.ac.at> * DESCRIPTION: New version is 2.3-55. * R/zzz.R (.onAttach): Add. 2019-08-13 Kurt Hornik <Kurt.Hornik@wu.ac.at> * DESCRIPTION: New version is 2.3-54. * R/dates.R: Add as.dates(). Suggestion by Gabor Grothendieck <ggrothendieck@gmail.com>. 2019-08-12 Kurt Hornik <Kurt.Hornik@wu.ac.at> * NAMESPACE: * R/times.R: Add as.times(). Suggestion by Gabor Grothendieck <ggrothendieck@gmail.com>.
2021-01-03(math/R-backports) Updated 1.1.4 to 1.2.1mef2-9/+8
# backports 1.2.1 * Adapted `get0()` to work with R-devel / R-4.1.0 for first argument having length greater than 1. # backports 1.2.0 * Switched to semantic versioning. * Added backport for `asplit()` for R versions prior to 3.6.0 (#47). * Added backport for `removeSource()` which also supports language objects for R versions prior to 3.6.0 (#50). * Added backport for `isNamespaceLoaded` for R versions prior to 3.2.0 (#49). # backports 1.1.10 * Added `suppressMessages()` and `suppressWarnings()` with support for argument `classes` for R versions prior to 4.0.0 # backports 1.1.9 * Added backports for `str2lang()` and `str2expression()` (#42) Thanks to @dmurdoch. * `import()` imported too many functions and has been fixed. # backports 1.1.8 * Added backport for `tools::vignetteInfo()` for R versions prior to 3.6.0 * Fixed import of `list2DF()` and `deparse1()` # backports 1.1.7 * Added backport for `deparse1()` for R versions prior to 4.0.0. * Added backport for `list2DF()` for R versions prior to 4.0.0. # backports 1.1.6 * Added backport for `R_user_dir()` for R versions prior to 4.0.0. * Added `dQuote()` and `sQuote()` with support for argument `q` for R versions prior to 3.6.0. # backports 1.1.5 * Changed license from GPL-2 to GPL-2 or GPL-3. * Added backport for `isTRUE()` implementing the new behaviour introduced in R 3.5.0.
2021-01-03(math/R-akima) Updated 0.6.2 to 0.6.2.1, ChangeLog unknownmef2-8/+7
2021-01-03(math/R-XML) Updated 3.98-1.20 to 3.99.0.5mef2-8/+10
Version 3.99-0 * We can specify R functions and C routines for use as XPath functions in calls to getNodeSet() and xpathApply(). * Implementations of XPath 2.0 functions matches(), lower-case(), ends-with(), abs(), min(), max(), replace() Version 3.98-2 * xmlSave() of a document to a file with encoding now honors indenting. Uses xmlSaveFormatFileEnc(). Issue identified by Earl Brown.
2021-01-03(math/R-SparseM) Updated 1.77 to 1.78 (make test fails for now)mef2-8/+9
The version 1.78 1. Changed check for symmetry to use all.equal() in response to an error reported by Brian Ripley.
2021-01-03(math/R-RcppEigen) Updated 3.3.5.0 to 3.3.9.1 (make test fails for now)mef2-8/+16
2020-12-17 Dirk Eddelbuettel <edd@debian.org> * DESCRIPTION (Version, Date): CRAN Release 0.3.3.9.1 (following coordinated update of reverse dependency StanHeaders) * inst/NEWS.Rd: Release 0.3.3.9.1 2020-12-14 Dirk Eddelbuettel <edd@debian.org> * .github/workflows/ci.yaml: Add CI runner using r-ci * README.md: Add new badge 2020-12-05 Dirk Eddelbuettel <edd@debian.org> * DESCRIPTION (Version, Date): Release 0.3.3.9.0 * inst/include/Eigen: Upgraded to Eigen 3.3.9 * inst/include/unsupported/Eigen: Idem * patches/eigen-3.3.9.diff: Carried local CRAN patches forward * .travis.yml: Switch to r-ci using focal and bspm * README.md: Updated URLs to https and/or redirect location * inst/CITATION: Idem * man/RcppEigen-package.Rd: Idem * man/fastLm.Rd: Idem 2020-08-16 Dirk Eddelbuettel <edd@debian.org> * README.md: Add JSS badge 2020-03-29 Dirk Eddelbuettel <edd@debian.org> * README.md: Added commit badge, edited 2020-01-22 Dirk Eddelbuettel <edd@debian.org> * README.md: README.md: Add a Debian badge 2019-11-16 Dirk Eddelbuettel <edd@debian.org> * DESCRIPTION (Version, Date): Release 0.3.3.7.0 * inst/include/Eigen: Upgraded to Eigen 3.3.7 * inst/include/unsupported/Eigen: Idem * patches/eigen-3.3.7.diff: Carried local CRAN patches forward 2019-11-01 Dirk Eddelbuettel <edd@debian.org> * R/unit.test.R (compile_unit_tests): Removed as no longer needed 2019-10-31 Dirk Eddelbuettel <edd@debian.org> * inst/tinytest/test_transform.R: Switch from RUnit to tinytest * inst/tinytest/test_wrap.R: Idem * inst/tinytest/cpp/transform.cpp: Added using Rcpp Attributes * inst/tinytest/cpp/wrap.cpp: Idem * inst/tinytest/cpp/sparse.cpp: More idiomatic Eigen code * inst/tinytest/test_sparse.R: Idem * .editorconfig: Added 2019-10-30 Dirk Eddelbuettel <edd@debian.org> * DESCRIPTION (Suggests): Switch from RUnit to tinytest * .travis.yml (install): Ditto * tests/tinytest.R: Converted to tinytest * test_sparse.R: Converted to tinytest * cpp/sparse.cpp: Added using Rcpp Attributes 2019-10-29 Dirk Eddelbuettel <edd@debian.org> * test_fastLm.R: Converted to tinytest * test_RcppEigen.R: Idem * test_solution.R: Idem * cpp/rcppeigen.cpp: Added using Rcpp Attributes * cpp/solution.cpp: Idem 2019-10-28 Dirk Eddelbuettel <edd@debian.org> * tests/tinytest.R: Renamed from tests/doRUnit.R * inst/tinytest/test_fastLm.R: Renamed from inst/unitTests/runit* * inst/tinytest/test_RcppEigen.R: Idem * inst/tinytest/test_solution.R: Idem * inst/tinytest/test_sparse.R: Idem * inst/tinytest/test_transform.R: Idem * inst/tinytest/test_wrap.R: Idem 2019-10-13 Dirk Eddelbuettel <edd@debian.org> * README.md: Added CRAN + BioConductor badges for reverse depends, add StackOverflow badge to recommend help searches under 'Rcpp' * DESCRIPTION (Version, Date): Roll minor version * R/RcppEigen.package.skeleton.R (RcppEigen.package.skeleton): Test for example_code outside of haveKitten test; remove force argument if unused 2019-05-24 Dirk Eddelbuettel <edd@debian.org> * vignettes/RcppEigen-Introduction.Rnw: Update vignette to use RcppEigen:::eigen_version() instead of .Call() 2019-03-29 Dirk Eddelbuettel <edd@debian.org> * inst/skeleton/rcppeigen_hello_world.cpp: Rework first example to not rely on Eigen RNG which R CMD check would complain about. 2019-02-16 James Joseph Balamuta <balamut2@illinois.edu> * R/runit.RcppEigen.R: Removed listing RcppEigen in Imports during skeleton package creation.
2021-01-03math/php-stats: update PHP versiontaca1-2/+2
Update supported PHP version; other than PHP 5.6.
2021-01-02(math/R-Rcmdr) Updated 2.7.0 to 2.7.1mef2-8/+8
Changes in version 2.7-1 o Updated Polish translation, thanks to Lukasz Daniel. o Fixed mixed-up .mo files for Spanish and Brazilian-Portuguese translations (problem reported by Jose Henrique Hildebrand Grisi Filho). o Small bug fixes to and improvements to repeated-measures dialogs.
2021-01-01(math/py-numba) regen PLISTmef1-1/+2
2021-01-01*: Recursive revbump from audio/pulseaudio-14.0ryoon7-14/+14
2021-01-01*: Recursive revbump from boost-1.75.0ryoon6-11/+12
2020-12-26maxima: Add missing PLIST entry.nia1-1/+2
From Chavdar Ivanov via pkgsrc-users.
2020-12-22(math/py-astroquery) Fix typo py-astro{4,}mef1-2/+2
2020-12-21(math/py-pyvo) Fix typo py-astropy4 to py-astropymef1-2/+2
2020-12-20py-scikit-image: Fix impossible-to-satisfy dependencynia1-2/+2
2020-12-20(math/erfa) unnecessary or harmfull python/egg.mk inclusion removedmef1-2/+1
2020-12-19(math/py-scikit-image) Updated 0.15.0 to 0.18.0mef3-152/+193
Release note is here: https://github.com/scikit-image/scikit-image/blob/master/doc/release/release_0.18.rst (Note: the category should be graphics instead of math)
2020-12-19devel(1) math(10), New packages Added:mef1-1/+11
Added math/py-asdf version 2.7.1 Added devel/py-extension-helpers version 0.1 Added math/py-astropy version 4.2 Added math/py-jplephem version 2.15 Added math/py-pyerfa version 1.7.1.1 Added math/py-pyvo version 1.1 Added math/py-astroquery version 0.3.9 Added math/py-astroML version 1.0 Added math/py-gwcs version 0.15.0 Added math/py-photutils version 1.0.1 Added math/py-astroplan version 0.7
2020-12-19(math/py-photutils) import py38-photutils-1.0.1mef4-0/+456
Based on PR pkg/55873 by Daisuke Kinoshita: Photutils is an Astropy coordinated Python module for astronomical photometry.
2020-12-19(math/py-gwcs) import py38-gwcs-0.15.0mef4-0/+160
Based on PR pkg/55873 by Daisuke Kinoshita: GWCS is an Astropy affiliated Python module for managing WCS (World Coordinate System) of astronomical data.
2020-12-19(math/py-astroML) import py38-astroML-1.0mef4-0/+359
Based on PR pkg/55871 by Daisuke Kinoshita: AstroML is an Astropy affiliated Python module for machine learning and data mining in astronomy.
2020-12-19(math/py-astroplan) import py38-astroplan-0.7mef4-0/+126
Based on PR pkg/55872 by Daisuke Kinoshita Astroplan is an Astropy affiliated Python module for planning astronomical observations.
2020-12-19(math/py-astroquery) import py38-astroquery-0.3.9mef4-0/+1345
Based on PR pkg/55870 by Daisuke Kinoshita: Astropy coordinated Python module for querying astronomical databases.
2020-12-19(math/py-pyvo) import py38-pyvo-1.1mef4-0/+365
Based on PR pkg/55869 by Daisuke Kinoshita: Astropy affiliated Python module for accessing to databases at virtual observatories.
2020-12-19(math/py-pyerfa) import py38-pyerfa-1.7.1.1mef4-0/+70
Based on PR pkg/55867 by Daisuke Kinoshita: PyERFA is a Python wrapper for ERFA (Essential Routines for Fundamental Astronomy) library.
2020-12-19(math/py-jplephem) import py38-jplephem-2.15mef4-0/+72
Based on PR pkg/55866 by Daisuke Kinoshita: Jplephem is a Python module for loading JPL (Jet Propulsion Laboratory) ephemeris for dynamical calculations of solar system bodies.
2020-12-19(math/py-astropy) import py38-astropy-4.2mef4-0/+2785
Based on PR pkg/55864 by Daisuke Kinoshita: Astropy is a Python module for astronomical calculations, data analysis, and plotting.
2020-12-19(math/py-asdf) import py38-asdf-2.7.1mef4-0/+655
Based on PR pkg/55863 by Daisuke Kinoshita The Advanced Scientific Data Format (ASDF) is a next-generation interchange format for scientific data.
2020-12-17MAINTAINER converted to pkgsrc-users@ the same as wipmef1-2/+2
2020-12-17(math/erfa) Added math/erfa version 1.7.1mef1-1/+2
2020-12-17math/erfa: import erfa-1.7.1 based on PR pkg/55858 by Daisuke Kinoshitamef5-0/+61
ERFA (Essential Routines for Fundamental Astronomy) is a C library for astronomy.
2020-12-14volk: update to 2.4.0tnn6-11/+52
pkgsrc: since the volk release tarball only provides the required cpu_features library as a git submodule that has to be manually cloned, we instead depend on devel/cpu_features from pkgsrc and patch the cmake files to accept the static library as an external dependency. Documentation Update README to be more verbose and to improve usefulness. Compilers AppleClang: Treat AppleClang as Clang. Paired with the cpu_features introduction, this enables us to use architecture specific kernels on a broader set of platforms. CMake Enable to not install volk_modtool. Remove "find_package_handle_standard_args" warning. cpu_features Use cpu_features v0.6.0 as a private submodule to detect available CPU features. Fix incorrect feature detection for newer AVX versions. Circumvent platform specific feature detection. Enable more architecture specific kernels on more platforms. Kernels Disable slow and broken SSE4.1 kernel in volk_32fc_x2_dot_prod_32fc Adjust min/max for 32f_s32f_convert_8i kernel Use INT8_* instead of CHAR_*
2020-12-09py-networkx: updated to 2.5adam3-10/+72
NetworkX 2.5 Highlights ---------- This release is the result of 10 months of work with over 200 commits by 92 contributors. Highlights include: - Dropped support for Python 3.5. - add Pathlib support to work with files. - improve performance. - Updated docs and tests. - Removed code designed to work with Python 2. New Functions: - lukes_partitioning - triadic analysis functions - functions for trophic levels analysis - d_separated - is_regular and other regular graph measures - graph_hash using Weisfeiler Lehman methods - common_neighbor_centrality (CCPA link prediction) - max_weight_clique - path_weight and is_path - rescale_layout_dict - junction_tree New generators: - paley_graph - interval_graph New layouts: - multipartite_layout Improvements ------------ - Add governance documents, developer guide and community structures - Implement explicit deprecation policy. - Initiate an NX Enhancement Proposal (NXEP) system - optimize single_source_shortest_path - improved consistent "weight" specification in shortest_path routines - Reduce numpy.matrix usage which is discouraged by numpy. - improved line color - better search engine treatment of docs - lattice and grid_graph and grid_2d_graph can use dim=tuple - fix initializer of kamada_kawai_layout algorithm - moral and threshold functions now included in namespace and docs - scale arrows better when drawing - more uniform creation of random lobster graphs - allow editing graph during iteration over connected_components - better column handling in coversion of pandas DataFrame - allow simrank_similarity with directed graph input - ensure VoteRank ability is nonnegative - speedup kernighan_lin_bisection - speedup negative weight cycle detection - tree_isomorphism - rooted_tree_isomorphism - Gexf edge attribute "label" is available API Changes ----------- - enabled "copy" flag parameter in `contracted_nodes` - allow partially periodic lattices - return value for minimum_st_node_cut now always a set - removed unused "has_numpy" argument from create_py_random_state - fixed return values when drawing empty nodes and edges - allow sets and frozensets of edges as input to nx.Graph() - "weight" can be function for astar, directional_dijksta, all_shortest_path - allow named key ids for GraphML edge writing - all keywords are now checked for validity in nx.draw and friends - EdgeDataView "in" operator checks if nodes are "in nbunch" - remove completeness condition from minimum weight full matching - option to sort neighbors in bfs traversal - draw_networkx accepts numpy array for edgelist - relabel_nodes with 2 nodes mapped to same node can now create multiedge - steiner_tree works with MultiGraph - Add `show` kwarg to view_pygraphviz - Prepare for turning chordal_graph_cliques into a generator - GraphML reader keyword force_multigraph creates MultiGraph even w/o multiedges
2020-12-09py-sympy: Update to 1.7ryoon3-20/+137
Changelog: SymPy 1.7 was released on 29th November 2020. This version of SymPy has been tested on Python 3.6, 3.7, 3.8, 3.9 and PyPy. See our Python version support policy for more information on when we plan to drop support for older Python versions. Note in particular that SymPy 1.5.1 was the last release to support Python 2.7. SymPy 1.7 will not work on Python 2.7. Python 2.7 users should install SymPy 1.5.1 and will not be able to install any further SymPy updates without updating to Python 3. Install SymPy with pip install -U sympy or if you use Anaconda conda install sympy Highlights There are many changes in 1.7 (see below). Backwards compatibility breaks and deprecations * core + Modules and names that were accidentally importable from sympy are no longer importable. In sympy 1.6 importing and using these names would give a deprecation warning. In sympy 1.7 these names are removed. As an example from sympy import add would need to be from sympy.core import add or import sympy.core.add as add. (#19554 by @oscarbenjamin) + DEPRECATION: Using non-Expr args in Add, Mul or Pow is now deprecated ( #19445 by @oscarbenjamin) * diffgeom + Manifold.patches attribute is deprecated. (#19368 by @JSS95 and @mcpl-sympy) + Patch.coord_systems attribute is deprecated. (#19368 by @JSS95 and @mcpl-sympy) + Class signature names of CoordSystem is deprecated. CoordinateSymbol class and CoordSystem.symbols attribute are introduced instead. (#19368 by @JSS95 and @mcpl-sympy) + CoordSystem.transforms, CoordSystem.connect_to, and CoordSystem.coord_tuple_transform_to are deprecated. Class signature relations, CoordSystem.transformation and CoordSystem.transform are introduced instead. (#19368 by @JSS95 and @mcpl-sympy) * printing + sympy.printing.pretty.pretty_symbology.xstr has been deprecated (#20081 by @eric-wieser) + The unicode argument to sympy.printing.stringpict.prettyForm has been deprecated (#20081 by @eric-wieser) + The deprecation of calling preview with viewer="StringIO" is now expired instead of forgotten (a regression in 1.6.0) (#19905 by @eric-wieser) + The modules sympy.printing.ccode, sympy.printing.fcode, and sympy.printing.cxxcode have been renamed to sympy.printing.c, sympy.printing.fortran, and sympy.printing.cxx, respectively. This was done to avoid conflicts that occur when a module name is the same as a function name. The modules are still importable under their old names but doing so is deprecated and a warning will be given (#19908 by @asmeurer) + from sympy.printing.codeprinter import Assignment no longer works. You should use from sympy.codegen import Assignment, which is where Assignment has lived since SymPy 1.1. (#19908 by @asmeurer) + Calling preview with viewer="file" no longer looks for a file executable (a regression in 1.6.0) (#19905 by @eric-wieser) * solvers + solve_linear_system is now a thin wrapper for linsolve. It is recommended to use linsolve in new code. solve_linear_system maybe deprecated or removed in future. (#18814 by @oscarbenjamin) * utilities + find_executable is deprecated in favor of the builtin shutil.which. (# 19634 by @eric-wieser) Changes * algebras + Added DocString for integrate function of quaternion class. (#19410 by @mohitshah3111999) * codegen + Added support for generating calls to scipy.special.cosm1. (#20011 by @bjodah) + sympy.codegen and sympy.combinatorics are no longer imported as part of from sympy import *. The codegen and combinatorics modules do not have any names that are included in the top-level namespace, so their being imported with the top-level SymPy was a mistake. This improves the import time of from sympy import *. (#19908 by @asmeurer) + Added support for generating calls to numpy.logaddexp & numpy.logaddexp2. (#19880 by @bjodah) + Fix bugs to the parser of matrix expressions in order to build CodegenArray objects correctly. (#19197 by @Upabjojr) * combinatorics + Fixed a bug in PermutationGroup.minimal_blocks caused by modifying a list while iterating over its indices. (#19954 by @ilya-pchelintsev) * concrete + Implemented Raabe's Test (#18656 by @sachin-4099) * core + Fixed a few broken cases of expr.is_integer (#20450 by @coproc and @tbennun) + Modules and names that were accidentally importable from sympy are no longer importable. In sympy 1.6 importing and using these names would give a deprecation warning. In sympy 1.7 these names are removed. As an example from sympy import add would need to be from sympy.core import add or import sympy.core.add as add. (#19554 by @oscarbenjamin) + Zero raised to power Negative Infinity gives ComplexInfinity(zoo) instead of zero (#20212 by @sidhu1012) + Extensible add, mul and power functions are introduced to allow sympy objects to define what classes should be used for them in place of Add, Mul and Pow (e.g. matrices use MatAdd). This is an experimental approach aimed at enabling the behaviour of core routines (expand, collect, etc) to be customised by user-defined types (e.g. MatAdd rather than Add). This mechanism is still experimental, is not fully implemented across the core and might be changed or removed in a future release of sympy. (#19463 by @JSS95 and @mcpl-sympy) + divmod on sympy.Float with 0 numerator now results in (0, 0). (#20109 by @eriknw) + Dict operations no longer automatically converts strings into SymPy types. (#19911 by @asmeurer) + Dict operations no longer raise SympifyError. (#19911 by @asmeurer) + Fixes _eval_nseries() function of power.py (#19508 by @sachin-4099) + Remove optional dependency on fastcache (#19492 by @pbrady) + DEPRECATION: Using non-Expr args in Add, Mul or Pow is now deprecated ( #19445 by @oscarbenjamin) + When creating an Add or Mul with evaluate=False identities (0 or 1) are no longer removed. (#19450 by @oscarbenjamin) + Fixes _eval_nseries() function of mul.py (#19369 by @sachin-4099) + Sum is now included in count_ops results (#19261 by @smichr) + match has been optimized to improve term-matching in Add (#19261 by @smichr) + match will automatically ignore bound symbols when matching (#19261 by @smichr) + match results will no longer contain extraneous symbols (only those requested) (#19261 by @smichr) + as_dummy should give a canonical result for expressions having bound symbols (#19261 by @smichr) + Lambdas written in terms of different symbols will no longer compare equal; this was an abuse of the Python == operator (#19261 by @smichr) + expr: A new method is_meromorphic is added. (#19306 by @jksuom) * diffgeom + Manifold.patches attribute is deprecated. (#19368 by @JSS95 and @mcpl-sympy) + Patch.coord_systems attribute is deprecated. (#19368 by @JSS95 and @mcpl-sympy) + Class signature names of CoordSystem is deprecated. CoordinateSymbol class and CoordSystem.symbols attribute are introduced instead. (#19368 by @JSS95 and @mcpl-sympy) + CoordSystem.transforms, CoordSystem.connect_to, and CoordSystem.coord_tuple_transform_to are deprecated. Class signature relations, CoordSystem.transformation and CoordSystem.transform are introduced instead. (#19368 by @JSS95 and @mcpl-sympy) + CoordSystem.jacobian_determinant method is introduced. (#19368 by @JSS95 and @mcpl-sympy) * functions + lambdify added a warning when args is a set. (#19792 by @foice, @RobertoFranceschini, and @sylee957) + Fixes _eval_nseries method of log (#20002 by @sachin-4099) + Adds _eval_is_meromorphic method and _eval_aseries to class lowergamma (#19990 by @sachin-4099) + Adds _eval_is_meromorphic method and _eval_rewrite_as_tractable method to class uppergamma (#19990 by @sachin-4099) + Rectifies eval method of class besselk (#19990 by @sachin-4099) + Adds _eval_is_meromorphic to bessel function. (#19963 by @sachin-4099) + Adds _eval_nseries function to sin and cos. (#19916 by @sachin-4099) + reduced symbolic multiples of pi in trigonometric functions (#19741 by @sachin-4099) + fixed errors in assumptions when rewriting RisingFactorial / FallingFactorial as gamma or factorial (#18696 by @sachin-4099) + Adds _singularities to LambertW function (#19716 by @sachin-4099) + Rectifies _eval_rewrite_as_tractable method of class erf (#19697 by @sachin-4099) + Improved condition checking in piecewise_simplify() (#19596 by @dhruvmendiratta6 and @smichr) + Implemented _eval_rewrite_as_Abs() for sign (#19487 by @dhruvmendiratta6) + Adds cdir parameter to handle series expansions on branch cuts (#19555 by @sachin-4099) + Adds _eval_rewrite_as_factorial() and _eval_rewrite_as_gamma() functionalities for subfactorial (#19515 by @sachin-4099) + Fixed cot.as_real_imag (sign error in imaginary part) (#19468 by @DaveWitteMorris and @gschintgen) + Corrects the _eval_as_leading_term() method of tan and sec functions (# 19461 by @sachin-4099) + bsplines are more robust in terms of handling symbolic knots (#19272 by @smichr) * geometry + Ellipses with eccentricity >=1 and for eccentricity < 0 will be handled as trivial cases (#20045 by @agrawalshubham01) * integrals + upgrades to manualintegrate to support inverse trig functions! (#19993 by @iammosespaulr) * interactive + The _repr_latex_, _repr_svg_, and _repr_png_ methods of subclasses of sympy objects are no longer discarded when init_printing() is called. ( #19944 by @eric-wieser) * logic + Binary boolean operators on Boolean objects no longer coerce strings (# 20093 by @eric-wieser) * matrices + Adding an array and a matrix now consistently gives TypeError. (#20159 by @sidhu1012) + changed subs function to check if input is zip (#19159 by @czgdp1807 and @gfolbe318) + added tests in test_commonmatrix.py (#19159 by @czgdp1807 and @gfolbe318) + The ordering of parameters in a parametrised solution from gauss_jordan_solve was fixed. Previously incorrect results were returned for some underdetermined systems. (#19885 by @1124816) + Prevents infinite recursion with rmul (#19860 by @mloubout) + Added class MatrixSet to represent the set of matrices (#19826 by @Smit-create) + Disabled default matrix intermediate product simplification and changed it to enable via context manager. (#19588 by @oscarbenjamin and @Pristine-Cat) + Use more efficient Cholesky factorization method to check if matrices are positive semidefinite. (#19573 by @galbwe) + row_del and col_del will raise IndexError rather than ValueError when the index is out of bounds. (#19571 by @sylee957) + Fixed a bug in the implementation of Sylvester's criterion for determining if a matrix is positive semidefinite. (#19556 by @galbwe) + Explicit non-matrix are treated as scalar (#19533 by @mloubout) + QRdecomposition will return matrices with zero rows and columns for zero rank matrices. e.g. Matrix([[0, 0, 0], [0, 0, 0], [0, 0, 0]]) will be decomposed with Matrix(3, 0, []) and Matrix(0, 3, []) (#19319 by @sylee957) + Added Matrix.companion for creating dense companion matrix. (#19339 by @sylee957) + Added CompanionMatrix for creating a symbolic companion matrix. (#19339 by @sylee957) + Matrix([]).eigenvals(multiple=True) will give an empty list instead of an empty dict. (#19355 by @sylee957) + Determinant is now considered commutative. (#19354 by @eric-wieser) * ntheory + Integrated Lenstra's Elliptic Curve factorization into factorint (# 19937 by @abh2k) + Added quadratic sieve (#19657 by @abh2k) + Implemented Lenstra's Elliptic curve factorization and Elliptic curve primality test (#19436 by @abhinav28071999) * parsing + Added support for while loop in C Parser (#20188 by @smitgajjar) + Upgraded Relational Operator support (#19982 by @iammosespaulr) + Bra-Ket Notation support (#19982 by @iammosespaulr) + Improved Grammar (#19982 by @iammosespaulr) + added Latex support for "not equal" and expanded support for less than, greater than symbols (#19970 by @bhpayne) + parse_latex supports \left and \right parenthesis notation. (#19466 by @sylee957) + parse_latex can parse expressions with amsmath spacing (#19475 by @sylee957) + Added parsing of \exp in parse_latex. (#19395 by @sylee957) + Add more parsing rules and test examples. (#19177 by @wuyudi) + Added support for more data types in C parser: signed char, unsigned char, short, short int, signed short, signed short int, unsigned short, unsigned short int, unsigned int, long, long int, signed long, signed long int, unsigned long, unsigned long int, double, long double. Also, modified the data type for int and float to intc and float32 respectively, replacing integer and real (#19230 by @smitgajjar) + Added support for shorthand operators in C parser: +=, -=, *=, /= and % = (#19230 by @smitgajjar) + Removed the assumption of value of a variable, if it is not initialized while variable declaration(e.g.; in case of int a;, the value of a was assumed to be Integer(0), in case of float b;, the value of b was assumed to be Float(0.0) and in case of bool c;, the value of c was assumed to be S.false). Also, removed the assumption of default value of formal parameters while parameter declaration in function definition or function prototype (e.g.; in case of function definition void func (int a, float b) { //some code }, default value of formal parametersa and b were assumed to be Integer(0) and Float(0.0) respectively) (# 19230 by @smitgajjar) * physics.control + Added dc_gain, poles, zeros, and is_stable in TransferFunction class. ( #19896 by @namannimmo10) + Adding a new control systems toolbox as physics.control. (#18436 by @benepla and @namannimmo10) + Add TransferFunction, Series, Parallel, and Feedback class for physics.control submodule (#19390 by @benepla and @namannimmo10) * physics.quantum + Simplification of Dagger() * IdentityOperator() (#19783 by @dhruvmendiratta6) + When printing, Commutator, Anticommutator, InnerProduct, TensorProduct, and OuterProduct now respect keyword-arguments to sstr. (#19424 by @eric-wieser) * physics.units + Fixed some dimensional analysis bugs with the addition and multiplication operators. (#19705 by @mgreminger) * physics.vector + Added user warnings for all possible paths are found in particle.py. (# 20131 by @sidhu1012) + Added user warning for cyclic paths in particle.py. (#20131 by @sidhu1012) + Point.vel() now attempts to calculate the velocity using the relative position from other points if it has not been already set by the user. This behavior mimics the existing behavior in ReferenceFrame.ang_vel_in (). (#20049 by @moorepants and @sidhu1012) + VectorLatexPrinter now respects the symbol_names setting when printing dynamicsymbols (#19684 by @eric-wieser) + VectorLatexPrinter now know about the same trig functions as the regular printer (#19684 by @eric-wieser) + When printing, Vector and Dyadic now respect keyword-arguments to sstr and latex. As a result, these no longer use vector printing customizations unless init_vprinting has been called. (#19640 by @eric-wieser) * plotting + capability to subclass Basebackend and specify it to the plotting functions, thus creating plots with other plotting libraries (#20463 by @oscarbenjamin) + Fixed plot3d_parametric_line plotting curves out of the box. (#19252 by @sylee957) * polys + Polys with complex floating point coefficients will now use the CC domain rather than EX. (#20194 by @oscarbenjamin) + Fixed a bug in minimal_polynomial when using Groebner bases (compose= False) (#19799 by @coproc) + Fixed GeneratorsError for creating some elements of FractionField when its ground domain is FractionField or PolynomialRing. (#19713 by @sylee957) + Fixed Poly initialized with PolyElement mutating the generator of the coefficient in the form of polynomial. (e.g. Poly(ZZ[x](x+1), y, domain =ZZ[x]) becomes Poly(y+1, y, domain=ZZ[x])) (#19659 by @sylee957) + Fixed Poly initialized with FracElement raising SympifyError. (e.g. dom = ZZ.frac_field(x); Poly(dom(x+2), y, domain=dom)) (#19659 by @sylee957 ) + Add division to finite extensions. (#19593 by @gschintgen and @jksuom) + Fixed GCD to always return a non-negative constant. (#19569 by @KaustubhDamania) + added new domains for Gaussian integers and rationals (#15396 by @jksuom and @smichr) + Add the Gaussian domains ZZ_I and QQ_I to Poly. Make Poly use the Gaussian domains automatically when I is present in the input. Add factorisation over the Gaussian integers (ZZ_I). The polys keyword argument gaussian=True now results in the domain QQ_I rather than the extension field QQ<I>. (#15396 by @oscarbenjamin) + improvement of dup_zz_mignotte_bound(f, K) by Knuth-Cohen bound (#19254 by @lagamura) * printing + Support frac with pycode printers (for lambdify) (#20115 by @ehren) + Round-trip printing of floats (double-precision) to content MathML. (# 19958 by @lcontento) + latex now once again requires settings to be passed as keyword and not positional arguments, and respects printer settings changed with set_global_settings; restoring the behavior from sympy 1.2 and earlier. (#20067 by @eric-wieser) + sympy.printing.pretty.pretty_symbology.xstr has been deprecated (#20081 by @eric-wieser) + The unicode argument to sympy.printing.stringpict.prettyForm has been deprecated (#20081 by @eric-wieser) + The unicode attribute of sympy.printing.stringpict.prettyForm has been deprecated (#20081 by @eric-wieser) + The mpmath code printer now correctly prints the loggamma function. (# 19913 by @abhaydhiman) + Use literal suffix for 1.0 in C89CodePrinter's printing of pow when the exponent is -1 (#19956 by @bjodah and @mmohrhard) + The modules sympy.printing.ccode, sympy.printing.fcode, and sympy.printing.cxxcode have been renamed to sympy.printing.c, sympy.printing.fortran, and sympy.printing.cxx, respectively. This was done to avoid conflicts that occur when a module name is the same as a function name. The modules are still importable under their old names but doing so is deprecated and a warning will be given (#19908 by @asmeurer) + from sympy.printing.codeprinter import Assignment no longer works. You should use from sympy.codegen import Assignment, which is where Assignment has lived since SymPy 1.1. (#19908 by @asmeurer) + Calling preview with viewer="file" no longer looks for a file executable (a regression in 1.6.0) (#19905 by @eric-wieser) + The deprecation of calling preview with viewer="StringIO" is now expired instead of forgotten (a regression in 1.6.0) (#19905 by @eric-wieser) + When printing, NDimArray now respects keyword-arguments to sstr (#19903 by @eric-wieser) + preview no longer fails with ValueError if the preamble contains a % character. (#19858 by @eric-wieser) + Types which are not recognized by the LaTeX printer no longer have their __str__ interpreted as LaTeX, and have their str(...) printed as pre-formatted text as if they were printed normally. This includes the builtin str type: latex("hello") now results in the latex \mathtt{\text {hello}}. If a custom type intends to be interpreted as latex, it should define the _latex hook as described in the docs: def _latex(self, printer): return str(self) # indicate that the result of __str__ is LaTeX-compatible To print a string containing LaTeX math using MathJax, use import IPython IPython.display.Math(string) (#19611 by @eric-wieser) + The latex printer now shows builtin floats using ...x10^... notation instead of ...e... notation. (#19611 by @eric-wieser) + preview now throws OSError instead of SystemError if viewers cannot be found. (#19818 by @eric-wieser) + Fixed the SciPy printer for sparse matrices (#19633 by @benjaminwolba and @sylee957) + preview(..., output='pdf') now uses dvipdfmx instead of dvipdf if available. As a result, it now works with a MiKTeX installation on windows. (#19635 by @eric-wieser) + LatexPrinter._print is no longer called on strings which have already been converted to Latex. (#19614 by @eric-wieser) + A new sympy.printing.defaults.Printable base class was added, which is a mixin providing _repr_latex_ in terms of LatexPrinter().doprint(). Any user type which subclasses this will opt into init_printing. (# 19425 by @eric-wieser) + Printing unevaluated Muls with multiple Number factors will show all factors strictly in order. Identities will also be shown explicitly. (# 19450 by @oscarbenjamin) + user types that implement _latex are now printed as LaTeX when embedded within builtin collections like list or dict. (#19389 by @eric-wieser) + fixed a bug where srepr function would not print dictionary and set properly (#19346 by @rational-kunal) + tuples of one element now include the usual trailing comma (#19348 by @eric-wieser) + mat_symbol_style='bold' no longer applies to subscripts of matrix symbols (#19301 by @eric-wieser) * series + Adds e.is_Pow heuristic to limits.py to improve the limit evaluations of Pow objects (#19680 by @sachin-4099) + Changes in mrv() function of gruntz.py and cancel() function of polytools.py resolves RecursionError and Timeout in limit evaluations ( #19646 by @sachin-4099) + modified order.py to better work with Add objects. (#19546 by @maurogaravello) + Adds a functionality to the doit() method of limits.py which uses is_meromorphic() for limit evaluations (#19432 by @sachin-4099) + Fixed wrong computations of fourier_series for even or odd functions with limits that are specified non-central. (#19382 by @sylee957) + Replaces xreplace() with subs() in rewrite() function of gruntz.py resolving incorrect limit evaluations (#19297 by @sachin-4099) + Adds a condition to limitinf() function of gruntz.py resolving incorrect limit evaluations (#19292 by @sachin-4099) * sets + Earlier expr and sets were treated equal which gave incorrect output for some set functions(mainly : - in, is_subset), made sets and expr not to be equal (#20208 by @sidhu1012) + nested multi-symbol first arg for ConditionSet now handled with subs/ as_dummy (#19512 by @smichr) + the bound symbols cannot be replaced with subs (#19512 by @smichr) + the error checking for mismatched signatures for sym and the base set has been improved (#19512 by @smichr) + ConditionSet still tries to unify symbols and denest a base set that is given as a ConditionSet but will no longer introduce new symbols (and will leave the base set a a ConditionSet) when this cannot be done (# 19512 by @smichr) + Fixed ConditionSet.dummy_eq() and ConditionSet.as_dummy(). (#19502 by @gschintgen) + Fixed ConditionSet.subs() in the case where the substitution targets a free symbol. (#19495 by @gschintgen) + Fixed _infimum_key sorting key. (#19437 by @gschintgen) + ImageSets with Lambdas having different symbols will no longer compare equal and should be compared like a.dummy_eq(b) (#19261 by @smichr) * simplify + Fixed sqrtdenest giving wrong results for some forms of sqrt(a + b*sqrt (r)) (#19932 by @sylee957) + Fixes a bug in collect when collection keys are not independent. (# 19720 by @mloubout) + Improved simplification for sign() (#19596 by @dhruvmendiratta6 and @smichr) + Improved trigsimp for hyperbolic functions nested in non-trig functions. (#19548 by @gschintgen) + Fixes a bug in collect when collected symbols appear in the facorized expression. (#19431 by @mloubout) * solvers + Added simplification strategies for simplifying the solutions of systems of ODEs (#19998 by @mijo2 and @oscarbenjamin) + Fix bug in nonlinsolve leading to key-error (#19189 by @nsfinkelstein and @oscarbenjamin) + improved functionality for solveset in case of inequalities (#19978 by @maurogaravello) + Handling of inequalities involving Piecewise is improved in solveset. ( #19986 by @maurogaravello) + Solving higher-order system of ODEs by reducing/transforming it into the first-order system of ODEs by numerous methods. (#19838 by @mijo2) + Added component division technique to divide the system of ODEs into logical sub-systems and solving each of these separately. (#19762 by @mijo2) + Extending checkodesol and constants_renumber to handle system of ODEs ( #19733 by @mijo2) + Added dsolve_system that can solve a system of ODEs (#19695 by @mijo2) + API for the _linear_neq_order1_type1-4 was changed to make it easier for anyone to access the solver (#19653 by @mijo2) + Solving linear systems particularly involving polynomial coefficients is much faster (#18844 by @oscarbenjamin) + Added the new n equations linear first-order non-constant coefficient non-homogeneous solver where the coefficient matrix of the system of ODEs is commutative with its antiderivative. (#19594 by @mijo2) + solveset will always use a symbol that has only either the real or complex attribute and no other attribute; when a ConditionSet is returned, the original symbol for which the solution is being sought will be used if it does not cause evaluation of the result. (#19512 by @smichr) + In dsolve there is no a general solver that can solve systems of constant coefficient non-homogeneous first order ODEs of any size in terms of integrals. (#19341 by @mijo2) + Fixed exception handling in solveset's secondary trigonometric solver. (#19566 by @gschintgen) + equations with an additive generator are now solved more quickly (# 19524 by @smichr) + Improved solveset capabilities for solving trigonometric equations, notably rational and symbolic coefficients are now supported. (#19507 by @gschintgen) + solve_linear_system is now a thin wrapper for linsolve. It is recommended to use linsolve in new code. solve_linear_system maybe deprecated or removed in future. (#18814 by @oscarbenjamin) + Addition of a solver that handles a subclass of linear first order non-constant coefficient homogeneous systems of ODEs with any number of equations. (#19185 by @mijo2) * stats + The state space of ContinuousMarkovChain is now by default a Range object instead of S.Reals. (#20150 by @czgdp1807 and @naveensaigit) + The generator matrix of ContinuousMarkovChain is now by default a MatrixSymbol object instead of None. (#20150 by @czgdp1807 and @naveensaigit) + RandomMatrixSymbol.doit will be invariant upon call. (#20136 by @sylee957) + The state space of DiscreteMarkovChain is now by default a Range object instead of S.Reals. (#20042 by @Maelstrom6) + The transition probability matrix of DiscreteMarkovChain is now by default a MatrixSymbol object instead of None. (#20042 by @Maelstrom6) + Fixed xreplace infinitely expanding random matrix ensemble classes. (# 20018 by @sylee957) + All the ensemble classes (RandomMatrixEnsemble, GaussianEnsemble, GaussianOrthogonalEnsemble, ...) now becomes stub function constructors. If you want to use them as classes, you should import them as RandomMatrixEnsembleModel, GaussianEnsembleModel, ... (#20018 by @sylee957) + Added sampling of Joint RVs from external libraries (#19848 by @Smit-create) + Added sampling for Matrix Distributions (#19857 by @Smit-create) + Allowing CompoundDistribution to handle more than one random variables (#19808 by @Smit-create) + Added Wishart and MatrixNormal Distributions (#19795 by @Smit-create) + Change in return type of P and E with evaluate=False. With evaluate= False, P and E are made to return Probability and Expectation object respectively. (#19819 by @Smit-create) + Added MatrixGamma Distribution (#19734 by @Smit-create) + Added symbolic classes of Moment and CentralMoment (#19724 by @Smit-create) + Added support for Compound Distributions (#19648 by @Smit-create) + Added doit in class Probability (#19696 by @Smit-create) + Added MutlivariateNormal and MutlivariateLaplace function (#19631 by @Smit-create) + Added Poisson, Wiener and Gamma Processes (#19387 by @Smit-create) + Added Expectation Matrix, Variance Matrix and CrossCovariance Matrix (# 19529 by @Smit-create) + Added sample_stochastic for sampling from stochastic processes. (#19500 by @Smit-create) + FIxes free_symbols method of RandomIndexedSymbol (#19459 by @Smit-create) + Added Sampling from external libraries for all the random variables of sympy (#19342 by @Smit-create) + Added doit method in Expectation and made E to call Expectation (#19290 by @Smit-create) + Added is_random in sympy.stats.rv to check if expression contains random variables (#19304 by @Smit-create) + expand added in sympy.stats.symbolic_rv API. (#19295 by @Smit-create) + Added Lomax and Bounded pareto distribution (#19273 by @Smit-create) + Added sampling methods for continuous variables (#18754 by @Smit-create ) + Added library option in sample (#18754 by @Smit-create) + sample returns an iterator object since version 1.7 (#18754 by @Smit-create) * tensor + Adding ArrayDerivative class as subclass of Derivative. This new handles derivatives involving non-scalar expressions. (#20072 by @Upabjojr) * utilities + sympy.utilities.iterables.partitions() no longer reuses the same dictionary for each yielded output. (#20154 by @asmeurer) + Add support for Integral with lambdify (using scipy or mpmath) (#20134 by @ehren) + Lambdifying an expression with loggamma using mpmath no longer raises ImportError. (#19913 by @abhaydhiman) + find_executable is deprecated in favor of the builtin shutil.which. (# 19634 by @eric-wieser) * vector + integral of parametric region depends on the order of limits at the time of initialization. (#20044 by @friyaz) + vector_integrate can integrate over ImplicitRegion objects. (#19883 by @friyaz) + Added a function to find a rational point on conic (#19807 by @friyaz and @Upabjojr) + Added support to create implictly defined regions. (#19681 by @friyaz) + Added support to integrate scalar/vector fields over objects of geometry module. (#19650 by @friyaz) + added class to represent integral of scalar/vector field over a parametric surface. (#19539 by @friyaz) + Modified API of ParametricIntegral class (#19580 by @friyaz) + Added class to represent a parametric region in space. (#19472 by @friyaz) * other + The LaTeX docs now need to built with xelatex rather than pdflatex. (# 20309 by @oscarbenjamin) + Support for Python 3.5 has been dropped. SymPy now requires Python 3.6 or newer. (#20145 by @oscarbenjamin) + more function raise TypeError when passed invalid keyword-arguments, rather than ignoring them silently (#20086 by @eric-wieser) + assert sympy.testing.pytest.raises(Exception, func) no longer always asserts when pytest is not present (#20012 by @eric-wieser) + Make SymPy do less at import time so that import sympy is faster. (# 19910 by @asmeurer) + Improve code quality by cleaning the doctests up (#19406 by @InCogNiTo124 and @oscarbenjamin) + intersphinx links to :mod:`sympy` no longer point to the documentation for Immutable Matrices (#19430 by @eric-wieser)
2020-12-06py-quadprog: updated to 0.1.8adam2-7/+7
0.1.8: Upload sdist to pypi: https://pypi.org/project/quadprog/0.1.8/
2020-12-04Revbump packages with a runtime Python dep but no version prefix.nia7-12/+14
For the Python 3.8 default switch.