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(No upstream changelog)
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(No changelog upstream)
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Upstream changes:
Changes in Version 1.7-10
o All methods that had previously been fully exported (merge.zoo,
MATCH.default, ..., and many more) in order to be accessible to
_all_ conceivable generics are now additionally registered as
S3method()s for the standard generics. Exception: as.Date.* are
still only fully exported.
o Added a new mean() method for "zoo" objects that simply does
mean(coredata(obj), ...).
o Added yearmon_trans, scale_x_yearmon and scale_y_yearmon and
yearqtr_trans, scale_x_yearqtr and scale_y_yearqtr to ggplot2 interface.
o Removed the use of the shape and linetype aesthetic by default
in autoplot() method.
o Bug fix in na.fill for univariate series based on 1-column matrices
(provided by Josh Ulrich).
o Added [[ methods for "yearmon" and "yearqtr".
o Constructs like time(obj)[ORDER(time(obj))] are now split up into
two steps in the package code. If zoo is only imported but not
loaded, R can otherwise have problems correctly dispatching to
the new generics ORDER and MATCH.
o as.Date() now also works for yearqtr/yearmon that are all NA
(especially needed for format() and print() method).
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This package lets you create and manipulate complex numbers. By default, Perl
limits itself to real numbers, but an extra use statement brings full complex
support, along with a full set of mathematical functions typically associated
with and/or extended to complex numbers.
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Gnumeric 1.12.3
Andreas:
* Fix border handling for merged cells in LaTeX export.
* Fix 'Go to First'. [#699631]
* Fix data merges. [#699897]
* Fix editing of hyperlinks. [#700732]
* Fix conditional formatting crash. [#700969]
* Do not include hidden cells in automatic print range. [#700994]
* Make buttons 1 and 2 behave similarly when selecting cells. [#700792]
* Warn when encountering extLst in xlsx import. [#700018]
* Use ctrl-a only to select the whole sheet, if the sheet
has focus. [#699746]
* Add a keyboard shortcut to jump to the current cell indicator.
[#699710]
* Fix placement of hyperlink tooltip. [#701436]
* Adjust cell comment display. [#698519]
* Make reference display in paste/define names dialog consistent with
sheet preferences. [Debian #699054]
* Write/read pagesetup settings to/from xlsx. [#701834]
* Fix in-cell-combos attached to merged cells. [#702146]
* Use the pagesetup setting to determine the landscape option in LaTeX
export [#702169]
* Fix ODF crash. [#702197]
* In ODF import ignored mentioned but not included sheets. [#698388]
* Fix crash on corrupted files. [#702205] [#702219] [#702285]
[#702288] [#702364] [#702409] [#702486] [#702485] [#702498] [#702322]
[#702689]
* Some documentation improvements. [Debian #621735] [Debian #530462]
* Fix crash on xlsx import due to external references. [#702407]
* Fix reading of conditional formats from xls files. [#702612]
* Fix reading of solid fill conditional formats from xlsx files.
[#702615]
* Improve xlsx import of new stat function names.
* Fix export of FLOOR(x) to xlsx. [Debian #464732]
* Fix clipboard related crash. [#702868]
Darrell Tangman:
* Update documentation for Edit and Insert menus. [#700596]
* Update documentation for comments and hyperlinks. [#700797]
* Consolidate comment, hyperlinks, names documentation.
* Update documentation for Manage Sheets, R1C1 notation,
sheet ranges. 1.12 updates, typo corrections, misc. cleanup.
Dmitry Smirnov:
* Fixes to the gnumeric and ssconvert manual pages.
Jean:
* Adjust labels vertical alignment in document properties
dialog. [#700156]
* Don't crash when exchanging missing axes. [#702126]
* Don't accept GNM_SHEET_PATTERNS as a valid pattern. [#702833]
Morten:
* Improve xlsx import of style-only cells.
* Don't write empty cells to .gnumeric.
* Add MPSEUDOINVERSE function.
* Add ctrl-shift-z as extra accelerator for redo. [#699579]
* Fix conditional format problem. [#699647]
* Remove gobject property strings from translation corpus.
* Improve LINEST. [#551457]
* Improve statfuns tests. [#700294]
* Improve mathfuns tests. [#700295]
* Add new R.PTUKEY function. [#700132]
* Add new Q.PTUKEY function. [#700132]
* Fix missing translation of certain function examples.
* Add new SNORM.DIST.RANGE function.
* Fix critical when last row deleted.
* Fix criticals in about dialog.
* Introspection fixes.
* Fix xls/biff5 link export. [#701604]
* Workaround problems with automake 1.13.
* Fix crashes on corrupted files. [#702101] [#702182] [#702218]
[#702267] [#702277] [#702379] [#702658] [#703006]
* Improve xls import of new stat function names.
* Plug leaks.
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p5-Math-Random-ISAAC-XS, p5-Number-Tolerant.
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math/p5-Math-Random-ISAAC.
As with other Pseudo-Random Number Generator (PRNG) algorithms like the
Mersenne Twister (see Math::Random::MT), this algorithm is designed to
take some seed information and produce seemingly random results as output.
However, ISAAC (Indirection, Shift, Accumulate, Add, and Count) has
different goals than these commonly used algorithms. In particular, it's
really fast - on average, it requires only 18.75 machine cycles to generate
a 32-bit value. This makes it suitable for applications where a significant
amount of random data needs to be produced quickly, such solving using the
Monte Carlo method or for games.
The results are uniformly distributed, unbiased, and unpredictable unless
you know the seed. The algorithm was published by Bob Jenkins in the late
90s and despite the best efforts of many security researchers, no feasible
attacks have been found to date.
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math/Math-Random-ISAAC-XS.
This module implements the same interface as Math::Random::ISAAC and can
be used as a drop-in replacement. This is the recommended implementation
of the module, based on Bob Jenkins' reference implementation in C.
Selecting the backend to use manually really only has two uses:
* If you are trying to avoid the small overhead incurred with
dispatching method calls to the appropriate backend modules.
* If you are testing the module for performance and wish to
explicitly decide which module you would like to use.
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devel/p5-Algorithm-Cluster.
This module is an interface to the C Clustering Library, a general purpose
library implementing functions for hierarchical clustering (pairwise simple,
complete, average, and centroid linkage), along with k-means and k-medians
clustering, and 2D self-organizing maps. This library was developed at the
Human Genome Center of the University of Tokyo. The C Clustering Library
is distributed along with Cluster 3.0, an enhanced version of the famous
Cluster program originally written by Michael Eisen while at Stanford
University.
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math/p5-Number-Tolerant.
Number::Tolerant creates a number-like object whose value refers to a
range of possible values, each equally acceptable. It overloads
comparison operations to reflect this.
I use this module to simplify the comparison of measurement results to
specified tolerances.
reject $product unless $measurement == $specification;
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Singleton and dense phases were implemented on computing
LU-factorization with Gaussian elimination. The singleton phase
is a feature that allows processing row and column singletons
on initial elimination steps more efficiently. The dense phase
is a feature used on final elimination steps when the active
submatrix becomes relatively dense. It significantly reduces
the time needed, especially if the active submatrix fits in CPU
cache, and improves numerical accuracy due to full pivoting.
The API routine glp_adv_basis that constructs advanced initial
LP basis was replaced by an improved version, which (unlike the
old version) takes into account numerical values of constraint
coefficients.
The proximity search heuristic for MIP was included in the GLPK
integer optimizer glp_intopt. On API level the heuristic can be
enabled by setting the parameter ps_heur in glp_iocp to GLP_ON.
This feature is also available in the solver glpsol through
command-line option '--proxy'.
A bug was fixed that caused numerical instability in the FPUMP
heuristic.
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Fixes build failure on platforms that are not supported by g95,
including NetBSD/arm 6.1. PR/47965
Ok'ed by wiz@.
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just use the pointers directly.
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Rename xeukleides to xeukleides10.
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This is a graphical frontend for eukleides legacy version.
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A Euclidean drawing language compiler which allows one to typeset
geometry figures within a (La)TeX document. This program is also useful
to convert such figures into EPS format or into various other vector
graphic formats.
This package is legacy version.
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* Change to 1.5 branch. New implementation.
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This commit makes no semantic change; it merely splits
USE_LANGUAGES=c fortran77
into two lines, reorders, and adds comments.
However, one can then easily turn off
USE_LANGUAGES+= fortran77
and turn on
CONFIGURE_ARGS+= --disable-fortran
and build, without a fortran dependency, and observe that there are no
PLIST problems.
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NetBSD 6, requested by tron.
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Recursively bump package revisions again after the "freetype2" and
"fontconfig" handling was fixed.
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to address issues with NetBSD-6(and earlier)'s fontconfig not being
new enough for pango.
While doing that, also bump freetype2 dependency to current pkgsrc
version.
Suggested by tron in PR 47882
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good enough.
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good enough.
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a) refer 'perl' in their Makefile, or
b) have a directory name of p5-*, or
c) have any dependency on any p5-* package
Like last time, where this caused no complaints.
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Changes since 3.1.2:
Bug 526 - Fix linear vectorized transversal in linspace.
Bug 551 - Fix compilation issue when using EIGEN_DEFAULT_DENSE_INDEX_TYPE.
Bug 533 - Fix some missing const qualifiers in Transpose
Fix a compilation with CGAL::Gmpq by adding explicit internal:: namespace when calling abs().
Fix computation of outer-stride when calling .real() or .imag().
Fix handmade_aligned_realloc (affected conservativeResize()).
Fix sparse vector assignment from a sparse matrix.
Fix log(0) with SSE.
Fix bug in aligned_free with windows CE.
Fix traits of Map<Quaternion.
Fix a few warnings (507, 535, 581).
Enable SSE with ICC even when it mimics a gcc version lower than 4.2
Workaround gcc-4.7 bug #53900 (too aggressive optimization in our alignment check)
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A new version of LU-factorization routines were added.
Currently this version provides the same functionality as the
old one, however, the new version allows further improving.
Old routines for FHV-factorization used to update the basis
factorization were replaced by a new version conforming to the
new version of LU-factorization.
Some clarifications about using the name index routines were
added.
Some typos were corrected in the MathProg language reference.
A serious bug (out-of-range indexing error) was *tentatively*
fixed in the routine glp_relax4. Unfortunatly, this bug is
inherited from the original Fortran version of the RELAX-IV
code (for details please see ChangeLog), and since the code is
very intricate, the bug is still under investigation.
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Update to version 2.77
Fix RPM spec file to not install tutorial twice
By default, the tutorial gets stuck in /usr/share/doc/nickle, while
rpm wants it in /usr/shar/doc/nickle-<version>. Ignore the one in /usr/share/doc/nickle.
doc: Expand tabs to spaces in .sgml files
Makes code examples readable.
Build tutorial when docbook2pdf is available
And build it on debian
tutorial: Use sgml entities instead of < and >
Tutorial: twixt doesn't have an optional 'else' block
This was a proposed feature that was removed
Rename nickle tutorial to nickle-tutorial
Makes any built files include 'nickle' by default
corrected some Nickle Tour nits
Handle OpFarJump in CompileReachable
A FarJump within a catch block references instructions one or more
frames outside of the instruction context. When checking for reachable
code, look down inside the catch blocks to see if any of the FarJumps
within them touch the target instruction.
Fixes this example:
void foo() {
for (;;)
try {
} catch uninitialized_value(string x) {
break;
}
}
Without this fix, the 'break' will not get noticed and no ReturnVoid
will be appended to the object code for 'foo', leaving the break
dangling in space.
New instructions IsType and HasMember need entries in OpNames
Otherwise, the array no longer matches the enum
Fix VALIDATE_EXECUTION test code
Needed ObjType defined.
Update to 2.76
Don't erase twixt pointer during JumpContinue until after stack copy
Otherwise, if MemCollect occurs during the stack copy, the twixt's
stack copy can get collected.
Check for lost stack chunks
If a stack chunk gets collected, the 'type' field will get
cleared. Check to see if this has happened and abort.
Add debug code to check thread validity during execution
If something gets corrupted, it's useful to have this code to help
track it down.
Handle initializers with undefined types.
Emit an error instead of crashing.
Handle systems which don't define PATH_MAX (Hurd)
This is a hack; a correct fix would involve actually allocating the
correct length object.
Version 2.75
Delete ancient .cvsignore files
Not exactly useful anymore
Examples shouldn't be executable
Fix Source URL in nickle.spec file
Point at nickle.org, as appropriate.
Make 'G' format limit array and struct recursion
This makes stack traces tractable.
Switch to dh for debian builds
Vastly simplifies debian/rules...
Stop printing recursive structs with 'g' format.
This gets annoying really quickly, so just terminate the recursive
struct printing right away.
Handle ref types in &foo->bar operations
For some reason, this case was left out of the usual ref type hacks
Version 2.74
Switch from debuild to pdebuild
Catch more package building problems by using pbuilder.
Fix Semaphore::wait logic (again) - partial means we've woken up
The only way to run do_Semaphore::wait with 'partial' set to true is
if the thread is waking up; in this case, the semaphore count may well
be negative if other threads are also waiting. Ignore the count in
this case and just complete the operation.
Add explicit debian source format 3.0 (native)
Keep lintian happy
Clean up some debian lintian warnings
Fix new FileVPrintf 'G' format comparison
Was comparing the pointer to the representation enum. oops.
Update debian/changelog for eventual 2.73 release
git-log has become git log
Needed to build ChangeLog
Back autoconf requirement to 2.64 so debian stable can run it
Shorten backtrace display
Don't display composite values in backtraces so that the
backtrace doesn't get flooded with giant values.
Typecheck switch expressions
Make sure switch expression and case expresssions are all type compatible.
Add is_type and has_member built-ins
These provide the ability to do run-time type comparisons without
needing full introspection in the language.
Add list.5c
A useful data type
add 'millis' function to return a clock in milliseconds.
Useful when doing things with sleep
Add Semaphore::count
Useful for checking current semaphore value without
modifying it.
Clean up do_Semaphore_wait
Make it clear that the semaphore count gets bumped down the first time
into this function.
Check for thread switch even if current thread is last
Threads can switch due to semaphores or other signals; that can leave
the current thread last in the run queue. Check for any case where
running changes instead of only when the current thread isn't last.
Make scanf not report valid conversion on blank input.
scanf was incorrectly accepting " " as a valid number, returning a
conversion of 0. Fix this by checking for empty strings in any numeric
conversion.
Add tests for scanf function
Scanf incorrectly accepts blank strings for numbers; here's a pile
of tests to validate various numeric input.
Add sort and skiplist to standard nickle library
These are too useful to just be examples
Add gamma function
Printing rational 0 in 'e' format doesn't need an exponent
Computing a negative exponent requires a non-zero value, so just skip
that if the value is zero
NaturalGcd must return a Natural* when aborting
It was returning One (an Integer) instead of one_natural;
floor() and ceil() should work on imprecise floats
They should return an approximate integer value instead of raising an exception.
Set version to 2.73 in prepartion for eventually release
Only call readline tty cleanup on signal readline is active
If readline isn't active, the cleanup functions tend to make a mess of
the tty state, so don't call them. This really only matters when
handling SIGTSTP.
Update to version 2.72
Keep readline from catching signals
This stops readline from catching signals, letting nickle handle them
all by itself.
Block in select instead of sigsuspend when waiting for I/O
The kernel doesn't appear to reliably deliver SIGIO while the
application is blocked, so sit in select instead of sigsuspend to make
sure we hear about pending I/O.
rename configure.in to configure.ac
Switch version to 2.72 in preparation for an eventual release
wait3 returns 0 when there's nothing left to do
Don't keep looping when wait3 is done
Update to version 2.71
Clean up a pile of build warnings
Signal return types, unused return values and stepping off the end of
the typePrim array (the value of which was unused anyways).
Catch attempts to use uninitialized pointer contents
Dereferencing a pointer to uninitialized storage is an error, instead
of passing this value along to callers, catch it immediately and raise
an exception. Check for this case in the ++ and -- operators to
generate a better error message (otherwise, we'll pass Void along and
generate an error much later).
Exit after two consecutive interrupts
If the first interrupt isn't received by the nickle code,
when the second one comes in, just exit
Cleanup struct type changes
Replace most parameterized macros with static inline functions
Typechecking, decent compiler warnings and smaller code.
Replace macros with static inline functions in value.h
Actual type checking, and smaller compiler output to boot.
Get rid of old-school variable length struct allocations
This confuses the new _FORTIFY_SOURCE bits in GCC, so use the
'sanctioned' form of placing a zero-length array at the end of the
struct.
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bugfixes.
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gh-2973 Fix `1` is printed during numpy.test()
gh-2983 BUG: gh-2969: Backport memory leak fix 80b3a34.
gh-3007 Backport gh-3006
gh-2984 Backport fix complex polynomial fit
gh-2982 BUG: Make nansum work with booleans.
gh-2985 Backport large sort fixes
gh-3039 Backport object take
gh-3105 Backport nditer fix op axes initialization
gh-3108 BUG: npy-pkg-config ini files were missing after Bento build.
gh-3124 BUG: PyArray_LexSort allocates too much temporary memory.
gh-3131 BUG: Exported f2py_size symbol prevents linking multiple f2py
modules.
gh-3117 Backport gh-2992
gh-3135 DOC: Add mention of PyArray_SetBaseObject stealing a reference
gh-3134 DOC: Fix typo in fft docs (the indexing variable is 'm', not 'n').
gh-3136 Backport 3128
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Notable changes (compared to version 1.1.8):
- New MatrixManipulation package.
- New ParallelIntegrationTools package.
- Gruntz algorithm in now used also for finite one-sided limits.
- FriCAS has now true 2-dimensional arrays (previously they were
emulated using vectors of vectors).
- Speedups in some matrix operations and in arithmetic with
algebraic expressions.
- FreeModule is now more general, it allows Comparable as second
argument.
- Changed Spad parser, it now uses common scanner with interpreter.
Spad language is now closer to interpreter language and Aldor.
'leave' is removed, 'free', 'generate' and 'goto' are now keywords.
Pile rules changed slightly, they should be more intuitve now.
Error messages from Spad parser should be slightly better.
Bug fixes, in particular:
- Fixed a few build problems.
- Eliminated division by 0 during 'normalize'.
- 'nthRootIfCan' removes leading zeros from generalized series
(this avoids problems with power series expanders).
- Fixed corruption of formal derivatives.
- Fixed two problems with fortan output.
- Fixed ')untrace' and ')undo'. Fixed ')trace' with ECL.
- Fixed problem with calling efricas if user default shell is (t)csh.
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* Updated translations
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Differences from previous version (5.5.2):
2013.02.15: Changes between NTL 5.5.2 and 6.0
Replaced the old template-like macros for vectors, matrices, and pairs
with true template classes: Vec<T>, Mat<T>, and Pair<S,T>. For
backwards compatibilty, all the names that were used in previous
versions (e.g., vec_ZZ_p, mat_ZZ_p) have been replaced with
appropriate typedefs.
For many years, I resisted the temptation of using templates, because
compiler support was very inconsistent. But that no longer seems to
be the case.
This change, while rather sweeping, should create very few, if any,
incompatibilities with existing software. The biggest issue would be
for software that uses the old template-like macros: such macro
invocations can simply be replaced with appropriate typedefs.
Made the conversion interface more complete and uniform. Also, using
template notation, one can and should now write conv<ZZ>(a) instead of
to_ZZ(a) (for backward compatibility, all the old names to_XXX are
still there, but many new conversions are not available under these
old names). There are many new conversions provided. Moreover,
whenever there is a conversion from a ring R to a ring S, there is a
corresponding, coefficiet-wise conversion from the polynomial ring
R[X] to the polynomial ring R[X].
In addition, using the template mechanism, there are generic
conversions for vectors and matrices. For example, if there is a
conversion from S to T, then there is automatically a corresponding
component-wise conversion from Vec<S> to Vec<T>.
Introduced a more general mechanism for accessing GF2's in packed
structures via indexing (see the class ref_GF2 in the GF2 module).
Employed ideas from David Harvey to make the single-precision FFT
faster (about twice as fast in many cases). This speeds up many
higher-level operations.
Fixed all known bugs.
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Summary of changes since 0.10.1:
This is a major release from 0.10.1 and includes many new features and
enhancements along with a large number of bug fixes. The methods of
Selecting Data have had quite a number of additions, and Dtype support
is now full-fledged. There are also a number of important API changes
that long-time pandas users should pay close attention to.
* New precision indexing fields loc, iloc, at, and iat, to reduce
occasional ambiguity in the catch-all hitherto ix method.
* Expanded support for NumPy data types in DataFrame.
* NumExpr integration to accelerate various operator evaluation.
* Improved DataFrame to CSV exporting performance.
For a full list refer to the "what's new" page.
Also fixes PLIST errors introduced in last update.
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PR pkg/47783 by Litvinov Sergey.
METIS 4.0.3, 3/19/11
------------------------------------------------------------------------------
r9587 | karypis | 2011-03-19 12:22:36 -0500 (Sat, 19 Mar 2011) | 1 line
- Renamed log2() to ilog2() to remove conflicts with C99 log2() function
- Fixed I/O routines to eliminate compilation warnings
- Fixed error reporting routines to eliminate compilation warnings
METIS 4.0.2, 3/10/04
------------------------------------------------------------------------------
- Fixed a problem with weighted graphs and ometis.c
METIS 4.0.1, 11/29/98
------------------------------------------------------------------------------
This is mostly a bug-fix release
- Fixed some bugs in the multi-constraint partitioning routines
- Fixed some bugs in the volume-minimization routines
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Major changes in 2.4:
- Improved HDF5 error logging management.
- Added support for the float16 data type.
- Leaf nodes now have attributes for retrieving the size of data in memory
and on disk.
- Configurable maximum number of threads for Blosc and Numexpr.
- ndim (read-only) attribute added to Leaf, Atom and Col objects.
- Added read support for variable length string attributes.
Full changelog for 2.4.0, see:
http://pytables.github.io/release-notes/RELEASE_NOTES_v2.4.x.html
Major changes in 2.3:
- Integrated functionality from PyTablesPro (re-licensed under a BSD license).
- OPSI is a powerful and innovative indexing engine allowing PyTables
to perform fast queries on arbitrarily large tables.
- A fine-tuned LRU cache for both metadata (nodes) and regular data.
Full changelog for 2.3.x, see:
http://pytables.github.io/release-notes/RELEASE_NOTES_v2.3.x.html
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Bump PKGREVISION.
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