pkgsrc - [no description]

Age	Commit message (Collapse)	Author	Files	Lines
2005-01-12	Nuke USE_FORTRAN and bring the f2c handling within the mk/compiler	jlam	1	-2/+2
	framework. The list of changes include: * Modify compiler.mk so that "c" is always prepended to USE_LANGUAGES, so we no longer need to say it in package Makefiles. Packages should now append to USE_LANGUAGES instead of setting it. * Create mk/compiler/f2c.mk which implements another pseudo-compiler "f2c" that may be used with any C compiler backend, e.g. PKGSRC_COMPILER= f2c ccache gcc * Teach the various "real" compiler files, e.g., sunpro.mk, mipspro.mk, etc., to use f2c if the native Fortran compiler isn't present. Packages that use Fortran should now simply include the line: USE_LANGUAGES+= fortran in the package Makefile.
2004-12-03	Rename ALL_TARGET to BUILD_TARGET for consistency with other *_TARGETs.	wiz	1	-2/+2
	Suggested by Roland Illig, ok'd by various.
2004-11-30	Update molden to 4.2. Patch provided by Osamu OISHI, the MAINTAINER.	minskim	2	-6/+9
	Changes since 4.0: - Corrected a few fortran syntax errors, thnx to Gyepes R. - on some platforms molden would not write a z-matrix, after stating that it just did. fixed. - radical changes in the way proteins can be manipulated with the z-matrix editor - The zmatrix conversion for proteins containing nucleotides has been improved, it will now create a zmatrix. - The windows version of molden now start the opengl helper program mogl, when you click a *.ogl file in the read file window. - Now when you apply the tinker amber force, automatically the charges associated with the atoms belonging to amino acid residues are set. - Added interactive docking. - More bug fixes and improvements.
2004-10-03	Libtool fix for PR pkg/26633, and other issues. Update libtool to 1.5.10	tv	1	-1/+2
	in the process. (More information on tech-pkg.) Bump PKGREVISION and BUILDLINK_DEPENDS of all packages using libtool and installing .la files. Bump PKGREVISION (only) of all packages depending directly on the above via a buildlink3 include.
2004-08-10	Update molden to version 4.0 - the old distfile has gone away from the	agc	2	-5/+5
	master site, and this package has an interactive fetch stage. Changes between version 3.8 and 4.0: Many bug fixes Better support for Mac OS Molden format files can now be concatenated into one file Molden now fully supports 5D and 7F orbitals Added a feature to display an interactive spectrum
2004-04-18	Convert to buildlink3.	snj	1	-3/+3

2003-07-21	COMMENT should start with a capital letter.	martti	1	-2/+2

2003-06-16	Evidently the idea of a version is fluid here as changes appear to be made over	jmc	1	-3/+3
	time to the same release (as evidence'd by changing dist files and the HISTORY file in the distribution). Updated to the current file as of 05/27/03
2003-03-22	Update to version 3.8.	salo	3	-11/+11
	Addresses PR pkg/20819 by Robert Elz. Changes: - Added the ability to write MDL mol files. - Added the ability to calculate EEM charges, a sort of gasteiger charges, by Patrick Bultinck - The reading of PDB files now handles additional Hydrogen labels The oniom stuff had a bug for the linux version, fixed. Added an update to the ONIOM window. - Complete update of the Gamess-UK dedicated code by Huub v. Dam: - Reading of SCF-convergence for CASSCF and DFT - Reading of CASSCF orbital occupancies - Support for HESSIAN jobs added - and more ... - Added support for the CPMD program Distributed with the permission of TEODORO LAINO NEST Laboratories - INFM - Scuola Normale Superiore Some work still needs to be done. - Added makefile entry for Mac OSX, thanks to Eric Brown. - Molden3.8 has support for tinker3.9, older versions of tinker are not supported (Molden3.7 support tinker3.6) (Thanks to Nicolas Ferre) - Nicolas Ferre added support for ONIOM calculations with gaussian98. - In submit gaussian window you can specify you want to write cartesian coordinates instead of z-matrix. - You can now run amber from gaussian, in the following way Read in a pdb file, click the z-matrix button and create a z-matrix, assign tinker amber atom types (the FF button) Go to submit job option gaussian, choose method "amber" "Write XYZ" form the "Gaussian Job" window. In principle this can be combined with the oniom method but this is not tested yet. - When introducing Mopac2000 support a bug was introduced which interfered with the reading of tinker xyz files, fixed.
2002-09-24	Complete standardization of messages according to latest pkglint.	wiz	1	-3/+3

2002-09-24	buildlink1 -> buildlink2	jlam	1	-4/+5

2002-07-17	Mark this package as having an interactive fetch stage	agc	1	-1/+3

2002-05-31	Initial import of molden-3.7 to the NetBSD packages collection.	kei	6	-0/+158
	MOLDEN is a package for displaying molecular density. It is tuned to the Ab Initio packages GAMESS* and GAUSSIAN. It can read all the information it needs from a GAMESS or GAUSSIAN outputfile. In this form it has been running on a CONVEX C-120, an APOLLO DN10000, an IRIS 4D/70GT, a DECSTATION 5000 and a SUN, and in slightly adapted versions on a VAX and a CRAY-YMP. It should run smoothly on most Unix machines. See section INSTALLATION GUIDE on how to install MOLDEN. (* The GAMESS version referred to here is the european version maintaned by M.F. Guest et al not to be confused with the american version maintained by M.W. Schmidt et al) This package was provided by Osamu OISHI and modified slightly by me.