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2012-09-11"user-destdir" is default these daysasau1-3/+1
2012-08-21Recursive PKGREVISION bump for tcl and tk upgrade to 8.5.12marino1-2/+2
2012-06-02Set USE_TOOLS instead of BUILD_DEPENDS to get csh, and use ${CSH}dholland1-5/+3
instead of "tcsh". This builds ok for me on NetBSD; if it turns out to cause trouble for anyone, revert it. The motivation was that the BUILD_DEPENDS accepted either tcsh or standalone-tcsh, and distbb was latching onto the latter and then failing trying to install it. If the package turns out to really need tcsh in some contexts, there are probably other ways to deal with this issue.
2012-04-18Fixup DESTDIR handling in do-install.markd1-5/+6
Add LICENSE (sun-iss + 2-clause-bsd + gpl + lgpl)
2012-04-15Add missing pam.bl3.mk. (but, it builds on LP64 platforms now. yay!)dholland1-1/+2
2012-04-15Reinstate patch-source-utilbin_Makefile (aka patch-ak)markd6-30/+168
Dont install *.orig files Fix build on 64bit systems Fix arch name for Linux Bump PKGREVISION
2012-04-07Mark sge and gridscheduler not for ${LP64PLATFORMS}. They crash duringdholland1-1/+4
build.
2012-03-20Update to the Son of Grid Engine 8.0.0dasau20-374/+289
The Son of Grid Engine is a community project to continue Sun Grid Engine. Notable changes in Son of Grid Engine ------------------------------------- Version 8.0.0d -------------- * Bug fixes * Man and fixes * Fix building with older gcc versions * Provide load average in qstat XML output [#446, #454] * Partially back out Univa change which broke classic spooling * Fix -terse in sge_request [#777] * Other changes (possibly-incompatible) * Message fixes Version 8.0.0c -------------- * Bug fixes * Man and other documentation fixes * Build/installation fixes (particularly for Red Hat 6 and Linux 3) * Fix group ids for submitted jobs [U] * Fix default value of boolean with JSV [U] * Windows fixes for helper crashes and Vista GUI jobs [U] * Ensure parallel jobs are dispatched to the least loaded host [U] * Correct ownership of qsub -pty output file; was owned by admin user [U] * Fix format of Windows loadcheck.exe output [U] * Read from stderr even if stdout is already closed in IJS [U] * Fix PDC_INTERVAL=NEVER execd parameter [U] * Fix accounting information for Windows GUI jobs [U] * Increase default MAX_DYN_EC qmaster param [U] * Fix qsub -sync y error message and enforce MAX_DYN_EC correctly [U] * Fix job validation (-w e) behaviour [#716] [U] * Fix qrsh input redirection [U] * Avoid warning when submitting a qrsh job [U] * Print start time in qstat -j -xml output [U] * Don't raise an error changing resource request on waiting job [#806] * Don't exit 0 on error with qconf -secl or -sep * Include string.h in drmaa.h [#712] * Fix process-scheduler-log with host aliases * Enhancements * Base qmake and qtcsh on the current gmake and tcsh source [#289, #504, #832] * Support "-binding linear" and "-binding linear:slots" * Use the hwloc library for all topology information and core binding, supporting more operating systems (now: AIX, Darwin, FreeBSD, GNU/Linux, HPUX, MS Windows, OSF/1, Solaris), and more hardware types (specifically AMD Magny Cours and similar) * Add task number to execd "exceeds job ... limit" * Other changes (possibly-incompatible) * Modify default paths in build files and elsewhere [U] * Assorted message fixes * In RPMs, move qsched to qmaster package, and separate drmaa4ruby * Default to newijs in load_sge_config.sh * Default to sh, not csh for configured shell Version 8.0.0b -------------- * Bug fixes * Build/installation fixes [including #424, #1349] [(U)] * Fix execd init script [#1348] * Man and other documentation fixes [including #614, #764] [(U)] * Fix contents of admin mail properly [#1307, #1345] * Fix qalter messages for -tc * Fix build with -DSGE_PQS_API * Fix group ids for submitted jobs [U] * Enhancements * Update qsched and add man page * Other changes (possibly-incompatible) * Avoid the use of /bin/ksh [#1306] * Change installation defaults to classic spooling, not adding shadow hosts, and not JMX. [(U)] Version 8.0.0a -------------- This is roughly a superset of Univa's 8.0.0 (the V800_TAG from https://github.com/gridengine/gridengine), with thanks for that. Changes made there which haven't been included in this version: PLPA source not removed; some different build/installation defaults (e.g. for JMX); Univa/UGE "branding" (partly because trademark status is unknown); authuser not removed (for SDM and testing use), * Bug fixes * Many man and other documentation fixes [including #790, #776, #769, #733, #610, #587, #581, #459, #456, #439, #255, #1288, #797, #1271, #773] [(U)] * Some program message fixes [(U)] * Various build and installation fixes [including #761, #709, #656, #616, #546, #536, #521, #491, #438, #414, #411, #383, #381, #138, #455, #344, #438, #1311, #1272, #1273] [(U)] * Ask for keystore password twice on installation * Fix qmaster crashes with tightly integrated parallel jobs or un-discoverable qinstance [#789] [U] * Report 0 cores and sockets on unsupported Solaris hosts [U] * Fix malloc hooks which caused crashes, particularly with SuSE 11 [#792, #748, #749] [U] * Verify the pe task start user in execd in non-CSP mode [U] * Fix binding parameters parsing [U] * Fix JSV logging with multiple users submitting jobs on same submit host [U] * Fix unresponsive qmaster when modifying the global configuration in a huge cluster [U] * Speed up finishing tightly integrated jobs [U] * Check consistency of JSV binding information properly [U] * Fix broken project spooling, which caused loss of project when restarting master when using core binding [U] * Fix slotwise preemption failure to unsuspend one job per host [#775] [U] * Fix problems retrieving passwd and group information with large responses [#1295] [(U)] * Fix JSV changing default of boolean [U] * Fix ENABLE_RESCHEDULE_SLAVE=1 [U] * Allow comma in CMDNAME with Perl JSV scripts [#803] * Don't put queue into error state when supplementary group id cannot be set [#185] [U] * Don't convert LF to CRLF with qrsh -pty [U] * Fix qconf segfault on bad subordination string [U] * Fix group ids of submitted jobs [U] * Disallow -masterq with serial jobs [#155] [U] * Fix 100% CPU use by shepherd of qsh [U] * Removed unnecessary binding warning on job starts [U] * Fix qconf error reports when tmp directory has 755 permissions [U] * Fix suspending of remote process on qrsh -pty yes <cmd> on Solaris [U] * Fix starting jobs after global host changed [U] * Reject invalid load_formula value [U] * Fix handling of implicitly-requested exclusive resources [U] * Fix execd vmem reporting on 64-bit Linux [U] * Fix startup of execd on Windows Vista [U] * Set xterm's path more appropriately on GNU/Linux [#557] * Fix generation of admin email from failed jobs [#1307] * Fix some ill-formed output from qstat -xml [#314] * Fix handling of multi-line environment variables propagated to shepherd [#395] * Fix example MPI PE templates * Fix bad quoting in JSV sh library * Fix checking of consumables for parallel jobs across multiple hosts [U] * Enhancements * Additional and clarified documentation * PAM modules for ssh tight integration and access control for interactive jobs * Initial core binding support for Solaris/SPARC64 [U] * Some efficiency improvements and memory leaks fixed [U] * Ports to S/390 and PARISC GNU/Linux [U] * New complex m_thread [U] * Show topology by default in qhost [U] * qsub -pty switch [#704] [U] * Improved qmon graphics [#530] [(U)] * Include bash in default shell list [U] * A JSV that rejects all jobs [U] * Files for Scali-MPI * Ruby DRMAA implementation * Enable easy building against shared system libraries and use system openssl and bdb binaries * New scripts: "qsched" reports resource reservations; "status" wraps qstat; enable/disable submission; node-selection (idle etc.) * Restart argument for daemon init scripts * Improved efficiency of shell JSV if used with bash * Core dumps from crashing daemons enabled under Linux [U] * Example host_aliases file [#154] * Spec file for RPM packaging [#820] * Other changes (possibly-incompatible) * Show core binding by default in qstat, qhost (use -ncb for compatibility) [U] * Removed Berkeley DB RPC support (recently dropped by BDB) [U] * Changed position in pending job list for user-rescheduled jobs (exit99, qmod -rj) and OLD_RESCHEDULE_BEHAVIOR, OLD_RESCHEDULE_BEHAVIOR_ARRAY_JOB parameters [U] * Unified GNU/Linux arch strings (lx-*, from lx24-* and lx26-*) [U] * Default to enabling core binding on GNU/Linux [U] * Removed Sun service tags support [U] * Removed obsolete SunHPCT5 files
2011-12-09PKGREV bump for libXp-less openmotifdrochner1-2/+2
2011-07-05If it's going to install tcl scripts, and use REPLACE_INTERPRETER on them,dholland1-2/+3
it needs to depend on tcl. PKGREVISION -> 4
2011-02-17Teach pkg about linux (only i386 at this stage).markd7-11/+201
2010-12-08Fix build on NetBSD-current: rename getline() and openssl>=1.0 issues.markd5-9/+85
2010-06-02Revision bump for db4 updateadam1-2/+2
2010-01-17Recursive PKGREVISION bump for jpeg update to 8.wiz1-2/+2
2009-08-19Fix installed manual pages to correctly refer to SGE rather than GE.markd1-3/+10
Also fix some interpreter paths. Bump PKGREVISION.
2009-06-14Remove @dirrm entries from PLISTsjoerg1-58/+1
2009-06-11regen distinfo to refrect last update.obache1-11/+16
2009-05-13Update sge to 6.2.2.1markd18-129/+265
Grid Engine 6.2, which has undergone significant changes in qmaster to significantly improve its scalability in challenging environments, adds powerful features to the core system, introduces multi cluster support for the Accounting and Reporting Console (ARCo) and comes with a new module extending the scope of Grid Engine to a new domain of use cases: the Service Domain Manager (SDM), aka. project Hedeby allows to dynamically (re-)assign computational resources on demand. plus lots of bug fixes.
2008-11-26Update SGE to 6.1.5markd5-25/+36
patch-au compiles sge_arch.c with -ansi so that stringification hack works on NetBSD and FreeBSD and probably others. Otherwise architecture names like nbsd-i386 turn into nbsd-1 - From the FreeBSD port. Bugs fixed in SGE 6.1u5 since release 6.1u4 wrong documentation for upgrade 6.0u2 and higher to 6.1u2 and higher Multiple loadsensor instances are trying to access the same temp load file on AIX51 Validation of the Filter List in Simple Query builder fails qhost -l h=<hostname> does not work Numbers in error mail too large use of the same pathes for input/output stream must be dealt with DRMAA Java language binding segfaults on Session.exit() with sol-x86 binaries on AMD64 sgeexecd startup script shouldn't suppress error messages from sge_execd binary Advanced Query with wild card character * does not produce correct results. 'Infinity' must be rejected when specified in 'complex_values' or RQS limits for consumables Invalid qconf -mrqs crashes qmaster with segmentation fault RQS: Line wrap of host list introduces syntax error Row Limit in ARCo Simple Query builder cannot be empty loadsensor does not work on AIX51 qhost -xml has wrong namespace QMON: The help for Resource Quotas is not available qmon fills in fields incorrectly for restoring config for Submit Job sgemaster -qmaster stop shutdowns also shadowd incorrect depencency on xinetd in init scripts for linux Latebindings for Advanced Queries does not work Switching from Simple Query to Advanced Query removes the Latebingings 32-bit Linux binaries are having problems with file access in 64-bit NFS environments using of default_domain may prohibit execd installation Commlib might crash if running out of memory Configuration file check of automatic installation does not recognize remsh loadcheck prints error message "kstat finds too many cpus" Communication library thread locking problem results in qmaster crash ARCo should not print exception stack trace in the console TABLESPACE values should be written to dbwriter.conf Incorrectly considering two host group names to be the same Clients not disconnecting correctly SGE util/arch script is broken for AIX 5.3 Operating System error message given by qalter -q '' <jobid> suggests a memory access problem bootstrap(5) man page sees itself als sge_conf(5) qmaster reinstall overwriting an existing installation fails qconf -ae|-Ae return 0 even if exechost exists already qconf -dxxxx does not set exit status on error qconf -as, -am, -ao, -Ae, -Acal, -Ackpt, -Ap when msg "already exist" should return not 0 exit code qconf -acal doesn't return error code 1 when failed setting of QMaster port number leads to infinite loop use of -l tmpdir=abc can crash schedd load scaling display not working correctly qstat -j does not print array task information job hold due to -hold_jid is not indicated as STATE_SYSTEM_ON_HOLD by drmaa_job_ps(3) Segmentation fault of sge_schedd A load sensor reporting values for other hosts does not work reporting file is lacking information about global consumables, if log_consumables=false Wallclock_Time query should be more constrained "./install_execd -winsvc -auto /path/to/auto.conf" command causes error The default has to be local spool directory when install_execd is run for a Windows host qmaster runs out of memory on AIX dbw install parameters are not verified Incorrect slots_total from qstat -F -xml output Wrong permissions if install_qmaster creates qmaster spool directory Installation of execution daemon left user unclear which port was chosen. Exception occurs during the exportation of a query result to pdf memory leak in sge_execd with qsub -v SGE_* or qsub -V ARCo should support SJWC 3.1 Bugs fixed in SGE 6.1u4 since release 6.1u3 on Windows installation fails when installing as root and SGE admin user = none accounting records for slave tasks of pe jobs should contain the correct task submission time check if config parameters qlogin_daemon and rlogin_daemon are pathes parallel scheduling memory leak in sge_schedd execd installation does not test absolute path for local spool dir Sort on table column throws exception if explicit SORT specified in SimpleQuery Sort on table column Error.jsp contains unbalanced tagError.jsp contains unbalanced tag arco_read should be able to create synonyms instead of arco_write DBW should use batch inserts prolog an epilog descriptions should include exit codes It is possible to negative tickets / shares in qmon and from the command line ORDER BY clause ignored in Advanced Query Queue Consumables query incorrect in ARCo predefined queries CLI accepts the slot number of more than 10000000 ARCo online help contains invalid, unclear or outdated information the installation of two rpc databases on the some host fails DBWriter should not exit if there is a database connection error Reporting 'View' dropdown menu and 'Save Result' functionality is confusing DBW derived rules and reporting queries that count jobs need to be updated incomplete error loging in case of classic spooling failures Row Limit in Simple Query uses wrong syntax NONE' as value is not rejected for queue_conf(5) shell and qsub(1) -S Upgrade to 6.1u3 fails for PostgreSQL < 8.0, minor issues i dbdefinition.xml for PSQL > 8.0 dbwriter should write checkpoint to database dbwriter deletion rules delete tasks of pe_jobs unclear 'exit_status' description in accounting(5) about Grid Engine specific status autoinstall configfile should be parsed and checked for valid input! qstat -j output is broken for shell_path the project field should be displayed in the qstat -j output Wrong variable for calculating daily host values from hourly ones Pending PE job qstat -j output displays addtional useless message when not running because of RQs automatic backup is broken! Spelling mistakes in the qmon help menus deletion rule for PostgreSQL incorrect for deletion of sge_share_log qquota broken if quota definition contains "hosts" or "users" scope negation Access_list(5) man page not precise enough with regards secondary/primary group(s) RQS debitation of running jobs is broken if enabled by -mattr Set SGE_QMASTER_PORT in settings file if sge_qmaster is not found in /etc/services file Failed to deliver STOP signal for subordinated jobs Missing array job task usage in the accounting file qhost/qstat can't be interrupted with ctrl-c typographical errors in messages from install_qmaster Sort order and row limit cannot be specified together in ARCo Simple Query builder Qmaster segfaults with long host resource evaluation expression Error message for unsupported platforms should be more verbose qsub does not accept resource strings size larger than 256 Memory leak in drmaa_run_job()/drmaa_run_bulk_job() ARCo reporting module installation script is broken on Red Hat Enterprise Linux 4 Update 4 Job predecessor list missing from qstat -j output In SJWC on Oracle dates appear truncated to just MM/DD/YYYY configfile check in automatic installation is to strict load sensor might block execd port Uninstallation of remote execd if not interactive Infotext spawned on remote machine with -wait or -ask does not display the text Uninstall does not remove the SGE_STARTUP_SCRIPT qmaster crashes when SGE_ND=1, dl 2 and BDB server spooling inst_sge -ux all -um fails Usage string for some commands is incomplete dbwriter installation can't finish on large amount of data reprioritize disappears after sge_qmaster restart qmaster failover should not change the state of any queue
2008-10-19Bump the PKGREVISION for all packages which depend directly on perl,he1-1/+2
to trigger/signal a rebuild for the transition 5.8.8 -> 5.10.0. The list of packages is computed by finding all packages which end up having either of PERL5_USE_PACKLIST, BUILDLINK_API_DEPENDS.perl, or PERL5_PACKLIST defined in their make setup (tested via "make show-vars VARNAMES=...").
2008-09-15Bugs fixed in SGE 6.1u3 since release 6.1u2ahoka10-95/+224
------------------------------------------- Issue Sun BugId Description -------- --------- ------------------------------------------------------------------------------------------ 376 4743006 problem with floating point job resource limits 1909 6353628 information provided by qstat -j and qstat -j -xml are not equivalent 2076 6440408 qstat -j messages disagree between plain, XML output 2077 6440412 qstat -j -xml messages incomplete 2138 6506667 forbid deletion of global config values 2194 6527836 authuser binary returns unusable error message! 2249 6568575 SGE does not work if primary group entry is too big in groups map 2270 6575720 ENABLE_ADDGRP_KILL is missing from sge_conf(5) 2272 6575727 sge_shadowd(8) man page is missing some env vars 2274 6564461 Duplicate scheduling info messages for reservation jobs 2276 6575731 share_tree(5) doesn't explain type field 2283 6565821 Oracle, Postgres DWB should prompt for tablespace where indexes and tables should be created 2293 6569088 Resource reservation broken for sequential jobs depending on RQS specified for subset of queues only 2303 6571749 parallel resource reservation broken when non-queue instance based quotas limits apply 2323 6576153 Creating a userset with NONE as a type results in a core dump 2327 6578213 qconf -(A,D,M,R)attr dumps core when the supplied file is empty 2328 6579232 high scheduler dispatching time with many sequential resource reservation jobs and resource quotas 2336 6287501 rctemplates lack of requirement 2338 6585721 Parallel RR broken if jobs wait for queue slots and no RQS configured 2342 6590010 Original primary group vanishes after newgrp command (USE_QSUB_GID=true) 2344 6590079 Resource reservation broken with sequences of identical jobs differing only in their -R y|n 2346 6604155 qmon binary job submit is broken 2351 6597463 qsub -t 1-N:N creates a normal job with one task 2352 6594665 Installation fails on Linux with glibc 2.6 2353 6597423 commit method of UnixLoginModule does not report RuntimeExceptions 2356 6600619 Userset spooling in classic mode is broken 2367 6597547 qdel does not recognize wc_job_range_list as it is defined 2369 6577034 Several qconf options display only single message when a list of messages should be printed 2372 6469494 clients should issue a more explicit error message when qmaster is busy 2374 6589459 Expose the availability of keyword "none" in the manual page of calendar_conf 2382 6569862 Unset old_value out of the scope 2383 6553062 qconf -mc accepts erroneous resource entries without an urgency; qmon gives (poor) error message 2387 6614041 Multiple occurrence of a name in RQS limit definition break classic spooling 2392 6614108 Specifying more than one drmaa_v_env attribute causes spurious error msg 2394 6608259 scheduler prints empty line in messages file after every 'sge_mirror' logging 2396 6608236 scheduling of parallel jobs does not respect consumables, if consumable is referenced in rqs 2400 6564543 sge_shepherd should exit if it cannot write to any of its essential files 2401 6617450 add option to reporting_params for switching off writing of consumables 2404 6618328 qmon displays wrong string for queue filtering 2406 6596931 Incorrect messages in qconf command 2407 6618619 the restore feature does not delete old configuration before restoring 2409 6619016 removing parameters from the reporting_params will not fallback to the default 2410 6619657 qmod -e|-d '*' times out in large clusters 2411 6619662 qhost becomes sluggish in large clusters 2414 6618599 Long running jobs cause incorrect usage summary for ARCo database 2415 6620930 ARCO view_accounting filters out parallel job usage incorrectly 2416 6621482 ju_exit_status should provide means to recognize the intermediate record 2417 6622842 the start_time field in intermediate accounting records is incorrect 2418 6588743 qrsh fails with "connection refused" error message 2419 6391244 qstat -ext reports wrong usage as compared to other commands such as qstat -t or qstat -j 2424 6620253 During the installation the admin user should create web.xml file 2428 6630268 upgrade from 6.0u2 and higher to 6.1u2 and higher does not work 2435 6599335 inst_sge help output for -upd switch is incorrect Bugs fixed in SGE 6.1u2 since release 6.1u1 ------------------------------------------- Issue Sun BugId Description -------- --------- ------------------------------------------------------------------------------------------ - 6590960 Man pages show the wrong version number 2345 6590574 resource quota can prevent dispatching of jobs that requests no resource in this quota 2343 6589807 newline missing from "illegal debug level format" message 2338 6585721 Parallel RR broken if jobs wait for queue slots and no RQS configured 2334 6584632 user/system/operator hold state combinations cause strange qstat output Bugs fixed in SGE 6.1u1 since release 6.1 ----------------------------------------- Issue Sun BugId Description -------- --------- ------------------------------------------------------------------------------------------ 2323 6576153 Creating a userset with NONE as a type results in a core dump 2317 6574565 Oralce, Postgres FOREIGN KEY fields need to be indexed - 6573980 'qconf -help' suggests usage of patterns in user_list which is not true 2316 6573508 qrsh with ssh causes job to go in error state when Ctrl-C is pressed 2308 6572803 qhost -xml lacks '>' with initial qhost tag 2309 6572801 sge_queue_values definition does not contain PRIMARY KEY 2321 6571714 Inadequate error message when qconf -sstree is run when no share tree is configuredIf no share tree 2241 6568712 util/arch has problem recognizing libc version number with comma 2292 6568578 6.1 upgrade procedure shall exit when there are jobs in the cluster 2249 6568575 SGE does not work if primary group entry is too big in groups map 2284 6565841 Oracle: rollback segments keep filling up, Postgres: delete query keeps running 2306 6564592 SGE 6.1 upgrade procedure is broken when using the classic qmaster spooling 2275 6564503 sge_schedd deadlock upon schedd_job_info job_list being enabled 2250 6558006 qmaster may crash with projects or usersets used in RQS 2243 6555744 qmon crashes when displaying about dialog 2248 6554313 add -u <user> to scheduler category only if there is a resource quota for the user 2238 6551568 need faster resource quota matchmaking and more concise job info messages - 6550718 qstat -j lacks resource quota info messages in case of "incomplete" resource quotas 2296 6548455 csp mode installation, using /etc/services, qmaster is not starting! 2232 6546807 qhost -j -xml does not work 2325 6542987 drmaa_run_job(3) raises error if drmaa_native_specification has leading spaces 2239 6542137 use of hostgroups in resource quotas is less performant than the full list of hosts - 6541085 NFS write error on N1GE trace file 2300 6539199 qquota(1) filtering broken for project and pe if -P/-pe switch is not used 2299 6536039 sgeremoterun not working 2201 6529974 Use of MORE fails on some architectures - 6528949 inst_sge -ux uninstallation of exechost tries to delete local spooldir, even it isn't configured! 2191 6525883 qstat -s hX filtering is broken on darwin 2189 6525375 qacct ignores jobs in output 2320 6513115 in qmon, under calendar configuration, it is possible to modify even if no calendar exists 2326 6506661 sge_conf(5), description for rlogin_daemon and qlogin_daemon is wrong 2307 6433628 qconf -sq all.q@myhost produces no value at all for complex_values (not even NONE) 2289 6565951 Qmon panel does not check for valid data in Scheduler Configuration 2314 6513116 Qmon x qconf inconsistent in allowed characters in attribute names - 6195248 QMON Job Control Window: Incomprehensible Priority Button 2313 6410592 Double clicking in Consumables/Fixed Attributes list does not behave as a GUI should 2312 6482211 complex attributes whose deletion is denied donot reflect back after the denial message in qmon 2301 6551121 Memory leak in libdrmaa.so 916 6355875 qsub -terse to just output job id - 6522273 Wrong exit code with qconf -sds 2266 6563346 Wrong usage of 'day' format model in trunc(date) Oracle functions 2187 6562190 memory leak in sge_schedd 2265 6280747 qmon loses sharetree changes 747 6291044 "Modify"-Button is activated but should be grayed 2263 6553066 qmon's Complex Configuration Load and Save buttons did not work 2262 4742097 Qmon has a ticket number limitation 1729 4818801 qmon on secondary screen crashes when "Job Control" is pressed 2261 6538740 clear usage operation should implicitely trigger refresh in share-tree dialogue 2260 6327539 Ability to sort queue instances using each column of the queue instances table 2229 6544869 UNKNOWN group/owner in accouting(5) 2247 6556411 DBW queries "Average Job Turnaround Time", "Average Job Wait Time" might not work - 6481737 Arco should support webconsole 3.0.x - 6559385 Calling JGDI getQueueInstanceSummary results in a memory leak 1813 6328064 Queue request -q from sge_request can't be overridden through command line - 6355674 arcorun can not be used as sge_admin user if the toc file is not available 2164 6514085 Need a possibility to update existing example queries for the ARCo web application - 6426331 remove util/sge_log_tee from distribution - 6476263 function job_get_id_string() is not MT save and used in qmaster 2219 6536426 inst_sge -m fails for non-root when USER variable is not set 1860 6345522 qdel on a job in deleted state does not output any information 2258 5081743 queue status in reporting file is missing. 2050 6422335 still used usersets/project/calendar/pe/checkpoint can be removed under certain conditions Bugs fixed in SGE 6.1 since release 6.1_beta -------------------------------------------- Issue Sun BugId Description -------- --------- ------------------------------------------------------------------------------------------ 1941 5086007 qstat -qs doesn't work 2183 6499217 meaningless error in clients when reporting_param flush_time is incorrectly set - 6525497 JGDI crashes JVM when null is passed to JNI GetStringUTFChars function 2220 6440226 add installation of SGE_Helper_Service to auto installation 2221 6521802 the binary check in inst_sge is wrong! - 6537633 Extraneous space in qsub's "Invalid month specification." message 2222 6538293 Hybrid user/project share-tree is broken for user sharing amongst array jobs 2180 6518684 Qconf usage x man page inconsistency 2181 6518689 Project man page contains different attribute names. 2171 6516288 Scheduler does not write pid file in daemonize phase 2178 6518607 invalid memory access in cl_com_get_handle - 6520761 add background mode to N1 Grid Engine Helper Service - 6233523 loadcheck reports on a hyperthreaded CPU only one processor - 6276612 provide support for Itanium platform 752 6288953 scalability issue with qdel and very large array jobs 751 6291047 qconf -sstnode cannot find root - 6303750 Install guide ambiguous on role of CSP 1930 6329378 incorrect qsub error message, if an invalid integer value is passed to the -l option 1858 6344960 qtcsh behaves differently in direct mode from qrshmode 1933 6349037 "qstat -explain E" displays explanation of the same error two times. 1940 6362523 qstat -q filter does compare hosts in queue instances - 6363245 on some Windows execution hosts, execd hangs after the job has finished 1978 6383256 no newline at end of sge_shepherd's exit_status messages - 6395078 wrong entry in sgepasswd file wrongly sets whole host in error state 2012 6402127 qconf -suserl reports incorrect status if no users are defined - 6403152 qconf -as returns error code 0 even in case of unresolvable host 2015 6403810 JavaDocs for DRMAA need improvement - 6428621 add a reserved complex value to control displaying Windows GUIs - 6453426 Event clients will not get list updates, when they change their subscription after the registration - 6461308 Wrong path to spooled parallel jobs with using classic spooling 2130 6501447 No online usage for MacOS X 2141 6506701 sge_shepherd dumps core on linux amd64 for qrsh jobs with very long cmdline (> 10k) 2233 6528950 modifying a RQS with invalid syntax results in its deletion - 6533952 Admins guide does not mention that parallel environments must be linked with queues - 6535768 Upgrade chapter 5 in 6.1 install guide must mention abolition of LD_LIBRARY_PATH for Solaris/Linux - 6535775 Upgrade chapter in 6.1 Install Guide wrongly indicates upgrade from 5.3 were possible - 6537476 6.1 install guide broken and incomplete wrts MySQL installation for ARCO - 6537607 6.1 Admins guide needs improvement on the linking between queues and parallel environments - 6539215 quota verification time may not grow with the number of queues 2224 6539792 resource quotas broken after qmaster restart - 6542483 Important changes with Resource Quota chapter in 6.1 admins guide - 6545277 sge_statistic tables are not documented 2230 6546370 Pivot for ARCo Accounting Queries does not show all the fields 2231 6546802 qstat -F -xml does not show resources Bugs fixed in SGE 6.1_beta since release 6.1_preview2 ----------------------------------------------------- Issue Sun BugId Description -------- --------- ------------------------------------------------------------------------------------------ - 6267190 Typo before "About the urgent priority" in Admin Guide 1445 6291021 64 bit solaris BDB rpc server broken 1703 6295319 Admin guide: refers to sge_host(5) instead of host_conf(5) - 6344917 Error in Embedded Command Line Options example - 6395075 on Windows, execd doesn't provide useful error messages when SSL keys broken 2188 6421113 CSP mode auto installation: certificates are not copied to submit hosts - 6444526 Admin guide describes N1GE backup facility, but restore is not described 2196 6472614 Auto installation option failed to save the install log 2182 6513433 remote installation of execd's need enhancement, rework, cleanup 2139 6506690 dbwriter should not use autocommit mode - 6520257 need to define continuation character behaviour with qconf file formats - 6521285 describe useful characters for every parameter 2185 6522385 qmon crash in cluster configuration dialog when modifying a host 2192 6525917 qacct -l h=<hostname> dumps core on darwin and linux itanium 2198 6528808 sge_ca script fails on nfs no root access file systems 2202 6530335 qmaster aborts when a resource quota set is modified while jobs are running 2204 6531317 qstat -xml does not show pending/zombie jobs 2206 6531921 qstat -r -xml is not working 2207 6533754 resource quota are modified on qconf -mrqs, even if the editor is exited without saving Bugs fixed in SGE 6.1_preview2 since release 6.1_preview1 --------------------------------------------------------- Issue Sun BugId Description -------- --------- ------------------------------------------------------------------------------------------ - 5093930 ARCo should work with MySQL - 5101053 Regular expressions should also be mentioned in qsub in addition to complex - 5101735 Needs more boolean operators support for resource requests 56 6205203 Logical OR operator works only with complex attributes of type RESTRING 2135 6506115 Invalid qconf -mattr crashes qmaster 2150 6507572 qconf -Arqs added invalid RQS 2146 6510635 Default requests for complexes not honored by resource quotas 2161 6513944 qmaster core dump with usersets referenced in RQS 2162 6513967 unix groups are not considered by RQS 2166 6515122 add -wd working_dir in addition to -cwd option for submission
2008-09-06Recursive PKGREVISION/ABI-depends bump for db4 4.6->4.7 update (shlibwiz1-2/+2
name change).
2008-01-18Per the process outlined in revbump(1), perform a recursive revbumptnn1-2/+2
on packages that are affected by the switch from the openssl 0.9.7 branch to the 0.9.8 branch. ok jlam@
2008-01-12db4 update related revision bumpadam1-1/+2
2007-09-25Back out previous. Pointed out by uebayasi@ and martti@.hira1-5/+5
2007-09-25ln -> ${LN}.hira1-4/+4
2007-08-15Update sge to 6.0 Update 11markd19-322/+83
Bugs fixed in SGE 6.0u11 since release 6.0u10 -------------------------------------------- scalability issue with qdel and very large array jobs loadcheck reports on a hyperthreaded CPU only one processor CSP mode auto installation: certificates are not copied to submit hosts qmon crashes when displaying about dialog sge_schedd deadlock upon schedd_job_info job_list being enabled Qmon has a ticket number limitation qmon on secondary screen crashes when "Job Control" is pressed queue status in reporting file is missing. "Modify"-Button is activated but should be grayed reporting(5) man page lacks information about sharelog records Ability to sort queue instances using each column of the queue instances table Queue request -q from sge_request can't be overridden through command line qdel on a job in deleted state does not output any information qsub -terse to just output job id qrsh man page doesn't explain which options don't work with interactive jobs Numbers in error mail too large still used usersets/project/calendar/pe/checkpoint can be removed under certain conditions remove util/sge_log_tee from distribution shell_start_mode should be documentated to be only used for batch jobs reserved usage not explained in sge_conf.5 Discrepancy between load values reported by Gridengine and from the HP-UX 64 bit env. auto installation option failed to save the install log function job_get_id_string() is not MT save and used in qmaster Broken output of job name with 'qsub -N' meaningless error in clients when reporting_param flush_time is incorrectly set remote installation of execd's need enhancement, rework, cleanup Scheduler does not write pid file in daemonize phase invalid memory access in cl_com_get_handle Qconf usage x man page inconsistency Project man page contains different attribute names. the binary check in inst_sge is wrong! Wrong exit code with qconf -sds qacct -l h=<hostname> dumps core on darwin and linux itanium inst_sge -m fails for non-root when USER variable is not set Extraneous space in qsub's "Invalid month specification." message Hybrid user/project share-tree is broken for user sharing amongst array jobs clear usage operation should implicitely trigger refresh in share-tree dialogue UNKNOWN group/owner in accouting(5) qmon's Complex Configuration Load and Save buttons did not work memory leak in sge_schedd Bugs fixed in SGE 6.0u10 since release 6.0u9 -------------------------------------------- qdel of just submitted job can't start qmaster message appears, but qmaster is started inst_sge script does not add the master host to the shadow_masters file wrong qlogin_daemon or rlogin_daemon in host conf doesn't set host and job into error state reprioritize field in qmon cluster config missing hostname resolving should not be case sensitive drmaa_version() function should return 1.0 DRMAA sessions should be persistent drmaa_control() causes illegal memory access getDrmaaImplementation() should return the same string as getDrmSystem() qconf rejects configuration, when attribute value ends with a space character during QMaster installation, creation of local database directory fails on hp11 the execd auto_install takes too long because of long delays after a parallel install block Unable to modify Advanced Settings in Configuration for Host in my cluster using qmon qacct -l h=<hostname> dump core shared library name DT_SONAME not set with libdrmaa.so Berkeley DB backup failed when using hostname with a fully qualified domain name the inst_common.sh is missing $SGE_EXECD_PORT potential security issues in cull library inst_sge -help wrongly indicates -bup/-rst works with BDB spooling only qping segfaults in ssl mode The sge_share_mon utility does not work with the automatic policy enforcement the auto uninstall execd needs a ssh deamon when the uninstall is done local accounting records for slave tasks of pe jobs contain invalid submission time DRMAA 1.0 interface need complete documentation in man pages qselect matches wrong resources which have been overridden at lower level qsh does not work if XAUTHORITY is set in root environment In certain cases jobs may stay in "t" state for 5 minutes qmaster logging "scheduler tried to remove a incomplete" ignore_fqdn is broken for the local configuration host already exists when modifying cluster settings segmentation fault with empty string qmaster performance gets throttled if qsub -sync y is used when many jobs are in the system sge_conf(5) setting 'max_u_jobs' broken if BDB spooling is used job control: sorting by different fields qmon job control: display wider default columns load formula does not recognize float as weighting factor qmaster dies when modifying slots value for queue domain when queuename is missing spooledit cannot dump USERSET objects default xterm path in arch_variables script not correct for darwin architectures qsh problems on darwin architecture because of wrong crypto lib execution daemon can crash on Linux where libnss_ldap.so uses BDB 4.2 shared library Bugs fixed in SGE 6.0u9 since release 6.0u8 ------------------------------------------- CSP mode is affected by OpenSSL Security Advisory [28th September 2006] account string does not accept the "|" character unreasonably long scheduler dispatch times if lots of projects are used in share tree unreasonably long scheduler dispatch times if lots of cluster queues are deployed in large clusters jobs with negative priority will be rejected by qmaster
2007-07-04Make it easier to build and install packages "unprivileged", wherejlam1-1/+3
the owner of all installed files is a non-root user. This change affects most packages that require special users or groups by making them use the specified unprivileged user and group instead. (1) Add two new variables PKG_GROUPS_VARS and PKG_USERS_VARS to unprivileged.mk. These two variables are lists of other bmake variables that define package-specific users and groups. Packages that have user-settable variables for users and groups, e.g. apache and APACHE_{USER,GROUP}, courier-mta and COURIER_{USER,GROUP}, etc., should list these variables in PKG_USERS_VARS and PKG_GROUPS_VARS so that unprivileged.mk can know to set them to ${UNPRIVILEGED_USER} and ${UNPRIVILEGED_GROUP}. (2) Modify packages to use PKG_GROUPS_VARS and PKG_USERS_VARS.
2007-06-08PKGREVISION bump for db4 shlib name change.wiz1-2/+2
2007-01-25Fix linkage of some support programs. Bump PKGREVISION.markd3-2/+26
2006-12-15Mechanically replace all includes of buildlink3.mk of the followingjoerg1-2/+2
packages with the modular Xorg equivalent. Those are falling back to the old location by default, so this commmit doesn't change dependencies. graphics/xpm ==> x11/libXpm fonts/Xft2 ==> x11/libXft x11/Xfixes ==> x11/libXfixes x11/xcursor ==> x11/libXcursor x11/Xrender ==> x11/libXrender x11/Xrandr ==> libXrandr
2006-10-21Note that the fetch stage is interactive.markd1-1/+3
2006-10-19Update sge to 6.0.8.markd40-896/+597
Several years worth of bug fixes and features.
2006-04-23Modify packages that set PKG_USERS and PKG_GROUPS to follow the newjlam1-2/+3
syntax as specified in pkgsrc/mk/install/bsd.pkginstall.mk:1.47.
2006-03-04Point MAINTAINER to pkgsrc-users@NetBSD.org in the case where nojlam1-2/+2
developer is officially maintaining the package. The rationale for changing this from "tech-pkg" to "pkgsrc-users" is that it implies that any user can try to maintain the package (by submitting patches to the mailing list). Since the folks most likely to care about the package are the folks that want to use it or are already using it, this would leverage the energy of users who aren't developers.
2006-02-05Recursive revision bump / recommended bump for gettext ABI change.joerg1-2/+2
2005-12-29Remove USE_PKGINSTALL from pkgsrc now that mk/install/pkginstall.mkjlam1-2/+1
automatically detects whether we want the pkginstall machinery to be used by the package Makefile.
2005-12-12Bump all motif packages for recent openmotif update. The major versionjoerg1-2/+2
of the shared libXm has changed.
2005-12-05Ran "pkglint --autofix", which corrected some of the quoting issues inrillig1-2/+2
CONFIGURE_ARGS.
2005-12-05Fixed pkglint warnings. The warnings are mostly quoting issues, forrillig1-5/+5
example MAKE_ENV+=FOO=${BAR} is changed to MAKE_ENV+=FOO=${BAR:Q}. Some other changes are outlined in http://mail-index.netbsd.org/tech-pkg/2005/12/02/0034.html
2005-11-26Fix build on NetBSD-current of the included tcsh in the same way thatmarkd2-1/+24
tron fixed the actual tcsh package.
2005-09-28Removed trailing white-space.rillig1-3/+3
2005-08-23The real user name in PKG_USERS does not need to be escaped with doublerillig1-2/+2
backslashes anymore. A single backslash is enough. Changed the definition in all affected packages. For those that are not caught, an additional check is placed into bsd.pkginstall.mk.
2005-07-16Get rid of USE_PERL5. The new way to express needing the Perl executablejlam1-3/+2
around at either build-time or at run-time is: USE_TOOLS+= perl # build-time USE_TOOLS+= perl:run # run-time Also remove some places where perl5/buildlink3.mk was being included by a package Makefile, but all that the package wanted was the Perl executable.
2005-06-17Create directories before installing files into them.jlam1-1/+3
2005-06-01Massive cleanup of buildlink3.mk and builtin.mk files in pkgsrc.jlam1-2/+1
Several changes are involved since they are all interrelated. These changes affect about 1000 files. The first major change is rewriting bsd.builtin.mk as well as all of the builtin.mk files to follow the new example in bsd.builtin.mk. The loop to include all of the builtin.mk files needed by the package is moved from bsd.builtin.mk and into bsd.buildlink3.mk. bsd.builtin.mk is now included by each of the individual builtin.mk files and provides some common logic for all of the builtin.mk files. Currently, this includes the computation for whether the native or pkgsrc version of the package is preferred. This causes USE_BUILTIN.* to be correctly set when one builtin.mk file includes another. The second major change is teach the builtin.mk files to consider files under ${LOCALBASE} to be from pkgsrc-controlled packages. Most of the builtin.mk files test for the presence of built-in software by checking for the existence of certain files, e.g. <pthread.h>, and we now assume that if that file is under ${LOCALBASE}, then it must be from pkgsrc. This modification is a nod toward LOCALBASE=/usr. The exceptions to this new check are the X11 distribution packages, which are handled specially as noted below. The third major change is providing builtin.mk and version.mk files for each of the X11 distribution packages in pkgsrc. The builtin.mk file can detect whether the native X11 distribution is the same as the one provided by pkgsrc, and the version.mk file computes the version of the X11 distribution package, whether it's built-in or not. The fourth major change is that the buildlink3.mk files for X11 packages that install parts which are part of X11 distribution packages, e.g. Xpm, Xcursor, etc., now use imake to query the X11 distribution for whether the software is already provided by the X11 distribution. This is more accurate than grepping for a symbol name in the imake config files. Using imake required sprinkling various builtin-imake.mk helper files into pkgsrc directories. These files are used as input to imake since imake can't use stdin for that purpose. The fifth major change is in how packages note that they use X11. Instead of setting USE_X11, package Makefiles should now include x11.buildlink3.mk instead. This causes the X11 package buildlink3 and builtin logic to be executed at the correct place for buildlink3.mk and builtin.mk files that previously set USE_X11, and fixes packages that relied on buildlink3.mk files to implicitly note that X11 is needed. Package buildlink3.mk should also include x11.buildlink3.mk when linking against the package libraries requires also linking against the X11 libraries. Where it was obvious, redundant inclusions of x11.buildlink3.mk have been removed.
2005-05-23Removed trailing white-space.rillig1-1/+1
2005-05-22Remove USE_GNU_TOOLS and replace with the correct USE_TOOLS definitions:jlam1-2/+2
USE_GNU_TOOLS -> USE_TOOLS awk -> gawk m4 -> gm4 make -> gmake sed -> gsed yacc -> bison
2005-04-28Avoid using != to define some variables .. just use :sh instead to deferjlam1-5/+7
evaluation until the make targets are invoked. This avoids needing ${ECHO} and ${TR} in the top-level make.
2005-04-11Remove USE_BUILDLINK3 and NO_BUILDLINK; these are no longer used.tv1-2/+1
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