From 9e413c1652fc7145352a93310118743cd47fc3b3 Mon Sep 17 00:00:00 2001 From: jtb Date: Sun, 25 Feb 2001 00:05:39 +0000 Subject: Updated hdf5 to 1.4.0. For further details of changes see ${PREFIX}/share/doc/hdf5/RELEASE.txt. New Features ============ * The Virtual File Layer, VFL, was added to replace the old file drivers. It also provides an API for user defined file drivers. * New features added to snapshots. Use 'snapshot help' to see a complete list of features. * Improved configure to detect if MPIO routines are available when parallel mode is requested. * Added Thread-Safe support. Phase I implemented. See: http://hdf.ncsa.uiuc.edu/HDF5/papers/mthdf/MTHDFpaper.htm for more details. * Added data sieve buffering to raw data I/O path. This is enabled for all VFL drivers except the mpio & core drivers. Setting the sieve buffer size is controlled with the new API function, H5Pset_sieve_buf_size(), and retrieved with H5Pget_sieve_buf_size(). * Added new Virtual File Driver, Stream VFD, to send/receive entire HDF5 files via socket connections. * As parts of VFL, HDF-GASS and HDF-SRB are also added to this release. To find out details, please read INSTALL_VFL file. * Increased maximum number of dimensions for a dataset (H5S_MAX_RANK) from 31 to 32 to align with HDF4 & netCDF. * Added 'query' function to VFL drivers. Also added 'type' parameter to VFL 'read' & 'write' calls, so they are aware of the type of data being accessed in the file. Updated the VFL document also. * A new h4toh5 utility, to convert HDF4 files to analogous HDF5 files. * Added a new array datatype to the datatypes which can be created. Removed "array fields" from compound datatypes (use an array datatype instead). * Parallel HDF5 works correctly with mpich-1.2.1 on Solaris, SGI, Linux. * You can now install the HDF5 documentation using the ``make install-doc'' command. The documentation is installed in the $(prefix)/doc directory where $(prefix) is the prefix specified by the (optional) ``--prefix'' flag during configuration. * HDF5 can operate correctly in the OpenMP environment in a limited way. Check doc/html/TechNotes/openmp-hdf5.html for details. --- devel/hdf5/Makefile | 62 ++--- devel/hdf5/files/md5 | 4 +- devel/hdf5/files/patch-sum | 7 +- devel/hdf5/patches/patch-aa | 16 -- devel/hdf5/pkg/PLIST | 565 +++++++++++++++++++++++--------------------- 5 files changed, 324 insertions(+), 330 deletions(-) delete mode 100644 devel/hdf5/patches/patch-aa diff --git a/devel/hdf5/Makefile b/devel/hdf5/Makefile index d66035d496c..09e28af953b 100644 --- a/devel/hdf5/Makefile +++ b/devel/hdf5/Makefile @@ -1,54 +1,26 @@ -# $NetBSD: Makefile,v 1.4 2001/02/16 14:38:31 wiz Exp $ -# +# $NetBSD: Makefile,v 1.5 2001/02/25 00:05:39 jtb Exp $ -DISTNAME= hdf5-1.2.2 -CATEGORIES= devel -MASTER_SITES= ftp://hdf.ncsa.uiuc.edu/HDF5/hdf5-1.2.2/src/ \ - ftp://sunsite.doc.ic.ac.uk/packages/HDF5/hdf5-1.2.2/src/ +DISTNAME= hdf5-1.4.0 +CATEGORIES= devel +MASTER_SITES= ftp://hdf.ncsa.uiuc.edu/HDF5/hdf5-1.2.2/src/ \ + ftp://sunsite.doc.ic.ac.uk/packages/HDF5/hdf5-1.2.2/src/ -MAINTAINER= jtb@netbsd.org -HOMEPAGE= http://hdf.ncsa.uiuc.edu/HDF5/ -COMMENT= Hierarchical Data Format (version 5) +MAINTAINER= jtb@netbsd.org +HOMEPAGE= http://hdf.ncsa.uiuc.edu/HDF5/ +COMMENT= Hierarchical Data Format (version 5) -DEPENDS+= jpeg-[0-9]*:../../graphics/jpeg +DEPENDS+= jpeg>=6:../../graphics/jpeg -GNU_CONFIGURE= YES -USE_LIBTOOL= YES -LTCONFIG_OVERRIDE= ${WRKSRC}/bin/ltconfig +GNU_CONFIGURE= #defined +USE_LIBTOOL= #defined +LTCONFIG_OVERRIDE= ${WRKSRC}/bin/ltconfig post-install: ${INSTALL_DATA_DIR} ${PREFIX}/share/doc/hdf5 - ${INSTALL_DATA_DIR} ${PREFIX}/share/doc/hdf5/ADGuide - ${INSTALL_DATA_DIR} ${PREFIX}/share/doc/hdf5/PSandPDF - ${INSTALL_DATA_DIR} ${PREFIX}/share/doc/hdf5/TechNotes - ${INSTALL_DATA_DIR} ${PREFIX}/share/doc/hdf5/Tutor - ${INSTALL_DATA_DIR} ${PREFIX}/share/doc/hdf5/Tutor/Graphics - ${INSTALL_DATA_DIR} ${PREFIX}/share/doc/hdf5/Tutor/examples - ${INSTALL_DATA_DIR} ${PREFIX}/share/doc/hdf5/Tutor/examples/java - ${INSTALL_DATA_DIR} ${PREFIX}/share/doc/hdf5/XML_DTD - @(cd ${WRKSRC}/doc/html/; \ - for f in *.html *.txt *.gif *.jpg *.c *.obj h5s.examples ; do \ - ${INSTALL_DATA} $$f ${PREFIX}/share/doc/hdf5; \ - done) - ${INSTALL_DATA} ${WRKSRC}/doc/html/ADGuide/* \ - ${PREFIX}/share/doc/hdf5/ADGuide - ${INSTALL_DATA} ${WRKSRC}/doc/html/PSandPDF/* \ - ${PREFIX}/share/doc/hdf5/PSandPDF - ${INSTALL_DATA} ${WRKSRC}/doc/html/TechNotes/* \ - ${PREFIX}/share/doc/hdf5/TechNotes - @(cd ${WRKSRC}/doc/html/Tutor; \ - for f in *.html *.txt *.gif *.JPG; do \ - ${INSTALL_DATA} $$f ${PREFIX}/share/doc/hdf5/Tutor/; \ - done) - ${INSTALL_DATA} ${WRKSRC}/doc/html/Tutor/Graphics/* \ - ${PREFIX}/share/doc/hdf5/Tutor/Graphics/ - @(cd ${WRKSRC}/doc/html/Tutor/examples/ ; \ - for f in *.c *.f90 ; do \ - ${INSTALL_DATA} $$f ${PREFIX}/share/doc/hdf5/Tutor/examples/ ; \ - done) - ${INSTALL_DATA} ${WRKSRC}/doc/html/Tutor/examples/java/* \ - ${PREFIX}/share/doc/hdf5/Tutor/examples/java/ - ${INSTALL_DATA} ${WRKSRC}/doc/html/XML_DTD/* \ - ${PREFIX}/share/doc/hdf5/XML_DTD + ${INSTALL_DATA} ${WRKSRC}/COPYING ${WRKSRC}/README \ + ${WRKSRC}/RELEASE.txt ${PREFIX}/share/doc/hdf5 + ${INSTALL_DATA_DIR} ${PREFIX}/share/doc/html/hdf5 + (cd ${WRKSRC}/doc/html; ${GTAR} cf - . ) | \ + (cd ${PREFIX}/share/doc/html/hdf5/; ${GTAR} xf - ) .include "../../mk/bsd.pkg.mk" diff --git a/devel/hdf5/files/md5 b/devel/hdf5/files/md5 index d075acbf8f7..ff99dbf8477 100644 --- a/devel/hdf5/files/md5 +++ b/devel/hdf5/files/md5 @@ -1,3 +1,3 @@ -$NetBSD: md5,v 1.1.1.1 2000/11/24 20:43:02 jtb Exp $ +$NetBSD: md5,v 1.2 2001/02/25 00:05:40 jtb Exp $ -MD5 (hdf5-1.2.2.tar.gz) = c11bd387b0ae556e70f16422a91b6a99 +MD5 (hdf5-1.4.0.tar.gz) = acc74bbe3ca2d0c85d2ad88116681dc5 diff --git a/devel/hdf5/files/patch-sum b/devel/hdf5/files/patch-sum index 065883028f0..2e1aeed7292 100644 --- a/devel/hdf5/files/patch-sum +++ b/devel/hdf5/files/patch-sum @@ -1,3 +1,6 @@ -$NetBSD: patch-sum,v 1.1 2001/01/19 20:46:49 jtb Exp $ +$NetBSD: patch-sum,v 1.2 2001/02/25 00:05:40 jtb Exp $ -MD5 (patch-aa) = 79d16e59ffcc51db50258ee89053f18a +This placeholder file is generated by the ``makepatchsum'' target +whenever the patches directory is empty or missing. Its purpose +is to ensure that the presence of any obsolete patches will cause +the proper error to be emitted at build time. diff --git a/devel/hdf5/patches/patch-aa b/devel/hdf5/patches/patch-aa deleted file mode 100644 index 306721a4dcb..00000000000 --- a/devel/hdf5/patches/patch-aa +++ /dev/null @@ -1,16 +0,0 @@ -$NetBSD: patch-aa,v 1.1 2001/01/19 20:46:50 jtb Exp $ - ---- tools/h5debug.c.orig Thu Jan 11 23:18:07 2001 -+++ tools/h5debug.c -@@ -56,6 +56,11 @@ - herr_t status = SUCCEED; - haddr_t extra; - -+ if (argc < 2) { -+ fprintf(stderr, "Usage: %s FILENAME [OFFSET]\n", argv[0]); -+ exit (1); -+ } -+ - /* - * Open the file and get the file descriptor. - */ diff --git a/devel/hdf5/pkg/PLIST b/devel/hdf5/pkg/PLIST index fef9eea32e2..984e856ae85 100644 --- a/devel/hdf5/pkg/PLIST +++ b/devel/hdf5/pkg/PLIST @@ -1,4 +1,4 @@ -@comment $NetBSD: PLIST,v 1.2 2001/01/04 15:10:28 agc Exp $ +@comment $NetBSD: PLIST,v 1.3 2001/02/25 00:05:40 jtb Exp $ bin/h5debug bin/h5dump bin/h5import @@ -9,23 +9,32 @@ include/H5Apublic.h include/H5Bpublic.h include/H5Dpublic.h include/H5Epublic.h -include/H5FLpublic.h +include/H5FDcore.h +include/H5FDdpss.h +include/H5FDfamily.h +include/H5FDgass.h +include/H5FDlog.h +include/H5FDmpio.h +include/H5FDmulti.h +include/H5FDpublic.h +include/H5FDsec2.h +include/H5FDsrb.h +include/H5FDstdio.h +include/H5FDstream.h include/H5Fpublic.h include/H5Gpublic.h include/H5HGpublic.h include/H5HLpublic.h include/H5Ipublic.h -include/H5MFpublic.h include/H5MMpublic.h include/H5Opublic.h include/H5Ppublic.h -include/H5RApublic.h include/H5Rpublic.h include/H5Spublic.h include/H5Tpublic.h include/H5Zpublic.h include/H5api_adpt.h -include/H5config.h +include/H5pubconf.h include/H5public.h include/hdf5.h lib/libhdf5.a @@ -34,264 +43,290 @@ lib/libhdf5.settings lib/libhdf5.so lib/libhdf5.so.0 lib/libhdf5.so.0.0 -share/doc/hdf5/ADGuide.html -share/doc/hdf5/ADGuide/H4toH5Mapping.pdf -share/doc/hdf5/Attributes.html -share/doc/hdf5/Caching.html 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