From c3f38745bc10a6e20dd4d99a5222431f6281921c Mon Sep 17 00:00:00 2001 From: jschauma Date: Fri, 26 Sep 2003 03:52:47 +0000 Subject: Initial import of hmmer, one of the many packages provided by brook at biology dot nmsu dot edu and his team at NMSU. HMMER is an implementation of profile HMM methods for sensitive database searches using multiple sequence alignments as queries. HMMER takes multiple sequence alignement as input and builds statistical model called "Hidden Markov Model" which can be used as a query into a sequence database to find and/or align additional homologues of the sequence family. --- biology/hmmer/Makefile | 16 ++++++++++++++++ 1 file changed, 16 insertions(+) create mode 100644 biology/hmmer/Makefile (limited to 'biology/hmmer/Makefile') diff --git a/biology/hmmer/Makefile b/biology/hmmer/Makefile new file mode 100644 index 00000000000..db1c4d7d724 --- /dev/null +++ b/biology/hmmer/Makefile @@ -0,0 +1,16 @@ +# $NetBSD: Makefile,v 1.1.1.1 2003/09/26 03:52:47 jschauma Exp $ +# + +DISTNAME= hmmer-2.3.1 +WRKSRC= ${WRKDIR}/hmmer-2.3.1 +CATEGORIES= biology +MASTER_SITES= ftp://ftp.genetics.wustl.edu/pub/eddy/hmmer/2.3.1/ + +MAINTAINER= hdp@cs.nmsu.edu +HOMEPAGE= http://hmmer.wustl.edu +COMMENT= Implementation of profile HMM software for protein sequence analysis + +USE_BUILDLINK2= yes +GNU_CONFIGURE= yes + +.include "../../mk/bsd.pkg.mk" -- cgit v1.2.3