From f6edf9d117c4d7e124d5c8410841c5db24c23455 Mon Sep 17 00:00:00 2001
From: rodent <rodent@pkgsrc.org>
Date: Sat, 6 Apr 2013 13:24:18 +0000
Subject: ".for variable names should not contain uppercase letters"

---
 biology/genesplicer/Makefile |  6 +++---
 biology/glimmer/Makefile     | 10 +++++-----
 biology/xylem/Makefile       |  6 +++---
 3 files changed, 11 insertions(+), 11 deletions(-)

(limited to 'biology')

diff --git a/biology/genesplicer/Makefile b/biology/genesplicer/Makefile
index 53c1f335cea..7b5e9ff731b 100644
--- a/biology/genesplicer/Makefile
+++ b/biology/genesplicer/Makefile
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.12 2012/09/11 20:32:12 asau Exp $
+# $NetBSD: Makefile,v 1.13 2013/04/06 13:24:18 rodent Exp $
 #
 
 DISTNAME=		GeneSplicer
@@ -24,8 +24,8 @@ INSTALLATION_DIRS=	bin
 do-install:
 	${INSTALL_PROGRAM} ${WRKSRC}/sources/genesplicer ${DESTDIR}${PREFIX}/bin
 	${INSTALL_DATA_DIR} ${DESTDIR}${EXDIR}
-.for DOC in readme fasta.example fasta.results
-	${INSTALL_DATA} ${WRKSRC}/sources/${DOC} ${DESTDIR}${EXDIR}
+.for doc in readme fasta.example fasta.results
+	${INSTALL_DATA} ${WRKSRC}/sources/${doc} ${DESTDIR}${EXDIR}
 .endfor
 	cd ${WRKSRC} && pax -rw ${EXAMPLES} ${DESTDIR}${EXDIR}
 
diff --git a/biology/glimmer/Makefile b/biology/glimmer/Makefile
index 903dbf559c3..a755f0cdb75 100644
--- a/biology/glimmer/Makefile
+++ b/biology/glimmer/Makefile
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.12 2012/09/16 17:20:17 cheusov Exp $
+# $NetBSD: Makefile,v 1.13 2013/04/06 13:24:18 rodent Exp $
 #
 
 DISTNAME=		glimmer213
@@ -19,16 +19,16 @@ WRKSRC=			${WRKDIR}/glimmer2.13
 INSTALLATION_DIRS=	bin
 
 do-install:
-.for PROGRAM in adjust anomaly build-icm check codon-usage compare-lists \
+.for program in adjust anomaly build-icm check codon-usage compare-lists \
 	generate get-len get-putative glimmer2 long-orfs
-	${INSTALL_PROGRAM} ${WRKSRC}/${PROGRAM} ${DESTDIR}${PREFIX}/bin
+	${INSTALL_PROGRAM} ${WRKSRC}/${program} ${DESTDIR}${PREFIX}/bin
 .endfor
 	# ``extract'' is also in the csound package, so rename to avoid conflict
 	${INSTALL_PROGRAM} ${WRKSRC}/extract ${DESTDIR}${PREFIX}/bin/glextract
 	${INSTALL_DATA_DIR} ${DESTDIR}${PREFIX}/share/doc/glimmer
 	${CP} ${WRKSRC}/README ${WRKSRC}/run-glimmer2.readme
-.for DOC in run-glimmer2.readme build-icm.readme extract.readme glimmer2.readme long-orfs.readme
-	${INSTALL_DATA} ${WRKSRC}/${DOC} ${DESTDIR}${PREFIX}/share/doc/glimmer
+.for doc in run-glimmer2.readme build-icm.readme extract.readme glimmer2.readme long-orfs.readme
+	${INSTALL_DATA} ${WRKSRC}/${doc} ${DESTDIR}${PREFIX}/share/doc/glimmer
 .endfor
 	${INSTALL_DATA_DIR} ${DESTDIR}${PREFIX}/share/glimmer
 	${INSTALL_SCRIPT} ${WRKSRC}/run-glimmer2 ${DESTDIR}${PREFIX}/share/glimmer
diff --git a/biology/xylem/Makefile b/biology/xylem/Makefile
index 223bb00ab88..4ba7c051637 100644
--- a/biology/xylem/Makefile
+++ b/biology/xylem/Makefile
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.10 2012/09/11 20:32:14 asau Exp $
+# $NetBSD: Makefile,v 1.11 2013/04/06 13:24:18 rodent Exp $
 #
 
 DISTNAME=		xylem.1.8.7
@@ -27,9 +27,9 @@ post-build:
 	${MV} ${WRKSRC}/src.c/shuffle ${WRKSRC}/src.c/xyl-shuffle
 
 do-install:
-.for PROGRAM in dbstat getloc getob xyl-identify prot2nuc reform ribosome \
+.for program in dbstat getloc getob xyl-identify prot2nuc reform ribosome \
 	splitdb xyl-shuffle flat2phyl phyl2flat
-	${INSTALL_PROGRAM} ${WRKSRC}/src.c/${PROGRAM} ${DESTDIR}${PREFIX}/bin
+	${INSTALL_PROGRAM} ${WRKSRC}/src.c/${program} ${DESTDIR}${PREFIX}/bin
 .endfor
 	${INSTALL_DATA_DIR} ${DESTDIR}${PREFIX}/share/doc/xylem
 	${INSTALL_DATA} ${WRKSRC}/doc/* ${DESTDIR}${PREFIX}/share/doc/xylem/
-- 
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