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# $NetBSD: Makefile,v 1.4 2004/04/11 04:02:23 snj Exp $
#
DISTNAME= glimmer212
PKGNAME= glimmer-2.12
CATEGORIES= biology
MASTER_SITES= ftp://ftp.tigr.org/pub/software/Glimmer/
MAINTAINER= hdp@cs.nmsu.edu
HOMEPAGE= ftp://ftp.tigr.org/pub/software/Glimmer/
COMMENT= System for finding genes in microbial DNA
USE_BUILDLINK3= yes
WRKSRC= ${WRKDIR}/glimmer2.12
do-install:
.for PROGRAM in adjust anomaly build-icm check codon-usage compare-lists \
generate get-len get-putative glimmer2 long-orfs
${INSTALL_PROGRAM} ${WRKSRC}/${PROGRAM} ${PREFIX}/bin
.endfor
# ``extract'' is also in the csound package, so rename to avoid conflict
${INSTALL_PROGRAM} ${WRKSRC}/extract ${PREFIX}/bin/glextract
${INSTALL_DATA_DIR} ${PREFIX}/share/doc/glimmer
${CP} ${WRKSRC}/README ${WRKSRC}/run-glimmer2.readme
.for DOC in run-glimmer2.readme build-icm.readme extract.readme glimmer2.readme long-orfs.readme
${INSTALL_DATA} ${WRKSRC}/${DOC} ${PREFIX}/share/doc/glimmer
.endfor
${INSTALL_DATA_DIR} ${PREFIX}/share/glimmer
${INSTALL_SCRIPT} ${WRKSRC}/run-glimmer2 ${PREFIX}/share/glimmer
.include "../../mk/bsd.pkg.mk"
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