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# $NetBSD: Makefile,v 1.7 2020/01/26 17:30:46 rillig Exp $
DISTNAME= samtools-1.9
PKGREVISION= 2
CATEGORIES= biology
MASTER_SITES= ${MASTER_SITE_GITHUB:=samtools/}
EXTRACT_SUFX= .tar.bz2
GITHUB_RELEASE= ${PKGVERSION_NOREV}
MAINTAINER= bacon@NetBSD.org
HOMEPAGE= https://www.htslib.org/
COMMENT= Tools for manipulating next-generation sequencing data
LICENSE= mit
USE_TOOLS+= gmake perl:run
GNU_CONFIGURE= yes
CONFIGURE_ARGS+= --with-htslib=system
TEST_TARGET= test
REPLACE_PERL= misc/*.pl
REPLACE_PERL+= misc/plot-bamstats
REPLACE_PERL+= test/test.pl
REPLACE_PYTHON= misc/*.py
.include "../../devel/zlib/buildlink3.mk"
.include "../../biology/htslib/buildlink3.mk"
.include "../../lang/python/application.mk"
.include "../../mk/curses.buildlink3.mk"
.include "../../mk/bsd.pkg.mk"
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