blob: ed32c60154fd5ca6b41c6db45294f2e5234a8d7b (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
|
# $NetBSD: Makefile,v 1.1 2018/12/22 21:52:06 bacon Exp $
DISTNAME= stacks-2.2
CATEGORIES= biology
MASTER_SITES= http://catchenlab.life.illinois.edu/stacks/source/
MAINTAINER= bacon@NetBSD.org
HOMEPAGE= http://catchenlab.life.illinois.edu/stacks/
COMMENT= Software pipeline for building loci from short-read sequences
LICENSE= gnu-gpl-v2
USE_LANGUAGES= c c++14
GCC_REQD+= 4.9
USE_TOOLS+= bash perl:run
GNU_CONFIGURE= yes
REPLACE_BASH= scripts/stacks-integrate-alignments scripts/stacks-gdb
REPLACE_BASH+= scripts/stacks-dist-extract
REPLACE_PERL= scripts/*.pl
REPLACE_PYTHON= scripts/*.py
CFLAGS+= -fopenmp
.include "../../lang/python/application.mk"
.include "../../devel/zlib/buildlink3.mk"
.include "../../mk/bsd.pkg.mk"
|