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| author | markd <markd@pkgsrc.org> | 2008-10-14 06:38:21 +0000 |
|---|---|---|
| committer | markd <markd@pkgsrc.org> | 2008-10-14 06:38:21 +0000 |
| commit | b72b878eb5c4930b2d2f2bf5e71ac528290efdc2 (patch) | |
| tree | 4edd8c06b1378ab069e4cf58521a5d2f8216427e | |
| parent | 77e71a88eccd998d7f53cc2473ce92e855a429fc (diff) | |
| download | pkgsrc-b72b878eb5c4930b2d2f2bf5e71ac528290efdc2.tar.gz | |
Update R-lmm to 0.3.5
Changes unknown
| -rw-r--r-- | math/R-lmm/Makefile | 9 | ||||
| -rw-r--r-- | math/R-lmm/distinfo | 9 | ||||
| -rw-r--r-- | math/R-lmm/patches/patch-aa | 13 |
3 files changed, 22 insertions, 9 deletions
diff --git a/math/R-lmm/Makefile b/math/R-lmm/Makefile index f65584813aa..7e70894a3bc 100644 --- a/math/R-lmm/Makefile +++ b/math/R-lmm/Makefile @@ -1,17 +1,16 @@ -# $NetBSD: Makefile,v 1.5 2007/02/22 19:30:04 wiz Exp $ +# $NetBSD: Makefile,v 1.6 2008/10/14 06:38:21 markd Exp $ # -PKGREVISION= 1 CATEGORIES= math MASTER_SITES= ${MASTER_SITE_R_CRAN:=contrib/} MAINTAINER= mchittur@cs.nmsu.edu -HOMEPAGE= ${R_HOMEPAGE_BASE}/lmm.html +HOMEPAGE= ${R_HOMEPAGE_BASE}/lmm/ COMMENT= Improved procedures for linear mixed models with R R_PKGNAME= lmm -R_PKGVER= 0.3-2 -USE_LANGUAGES= c fortran +R_PKGVER= 0.3-5 +USE_LANGUAGES+= c fortran .include "../../math/R/Makefile.extension" .include "../../mk/bsd.pkg.mk" diff --git a/math/R-lmm/distinfo b/math/R-lmm/distinfo index 8d3c338eca8..0d058fe8f1b 100644 --- a/math/R-lmm/distinfo +++ b/math/R-lmm/distinfo @@ -1,5 +1,6 @@ -$NetBSD: distinfo,v 1.1.1.1 2005/11/04 08:15:42 rillig Exp $ +$NetBSD: distinfo,v 1.2 2008/10/14 06:38:21 markd Exp $ -SHA1 (R/lmm_0.3-2.tar.gz) = a33a23ed1d9ae2a66d66bed0cee40bf3d1956647 -RMD160 (R/lmm_0.3-2.tar.gz) = c22870556376f489211d0c3882542d5a64b8ba70 -Size (R/lmm_0.3-2.tar.gz) = 30977 bytes +SHA1 (R/lmm_0.3-5.tar.gz) = 47576977719aba4e8c0cf3f9b13db4747cc9a4d9 +RMD160 (R/lmm_0.3-5.tar.gz) = de3d86ae4ba7716bae8c2e56980da23ca9cee1a9 +Size (R/lmm_0.3-5.tar.gz) = 214352 bytes +SHA1 (patch-aa) = 3aec0141a51f95167d5fb27cabaaea84dfb6be48 diff --git a/math/R-lmm/patches/patch-aa b/math/R-lmm/patches/patch-aa new file mode 100644 index 00000000000..8d9145ab58c --- /dev/null +++ b/math/R-lmm/patches/patch-aa @@ -0,0 +1,13 @@ +$NetBSD: patch-aa,v 1.1 2008/10/14 06:38:22 markd Exp $ + +--- src/lmm.f.orig 2008-10-14 19:30:49.000000000 +1300 ++++ src/lmm.f +@@ -549,7 +549,7 @@ C 3 = inadequate information to obta + C 4 = value of xi or inv(Ui) became non-pos.def. during iterations + C 5 = t(X)%*%W%*%X became non-pos.def. during iterations + C 6 = supplied xihat is non-pos.def. +- integer gmax/50/ ++ integer gmax + double precision estarhat(0:50) + integer ntot,subj(ntot),m,ist(m),ifin(m),occ(ntot),nmax, + / pcol,q,zcol(q),iflag,err,msg,iter,p,xcol(p),i,j, |