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authorwen <wen>2014-11-01 13:31:10 +0000
committerwen <wen>2014-11-01 13:31:10 +0000
commitf40b9dc9c0b81e10ebb4da1430255ffcdb0c0a75 (patch)
tree743f1d95730c73b4e256be7fb22aa547640a83b8
parentaf06a7c7e2484e78035f0bd327be352899a025ab (diff)
downloadpkgsrc-f40b9dc9c0b81e10ebb4da1430255ffcdb0c0a75.tar.gz
Update to 0.9
Upstream changes: Version 0.9 2013-12-10 Change LICENCE following advince from Kurt Hornik Version 0.8 2013-12-10 date stamp for CRAN submssion 2013-09-30 mv inst/doc vignettes rmdir inst Version 0.7 2013-09-27 Add MIT to LICENSE Version 0.6 2012-04-16 Change "integer gmax/50/" into "integer gmax, data gmax/50/" in lmm.f as suggested by Brook Milligan [mailto:brook@nmsu.edu] 2012-04-11 Revise example.Rd 2012-04-06 Include incomplete data in marijuana.rda Accommodate the change in example.Rd 2012-04-05 Fix typos and add title to Table 1 in lmm-tr.Rnw
-rw-r--r--math/R-lmm/Makefile4
-rw-r--r--math/R-lmm/distinfo8
-rw-r--r--math/R-lmm/patches/patch-aa14
3 files changed, 6 insertions, 20 deletions
diff --git a/math/R-lmm/Makefile b/math/R-lmm/Makefile
index 0ee9892f4d5..90b27c71e71 100644
--- a/math/R-lmm/Makefile
+++ b/math/R-lmm/Makefile
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.10 2012/04/15 13:46:13 brook Exp $
+# $NetBSD: Makefile,v 1.11 2014/11/01 13:31:10 wen Exp $
#
CATEGORIES= math
@@ -10,7 +10,7 @@ COMMENT= Improved procedures for linear mixed models with R
# LICENSE= file LICENSE
R_PKGNAME= lmm
-R_PKGVER= 0.5
+R_PKGVER= 0.9
USE_LANGUAGES+= c fortran
diff --git a/math/R-lmm/distinfo b/math/R-lmm/distinfo
index 179ccf4e8a6..99dfb8448d0 100644
--- a/math/R-lmm/distinfo
+++ b/math/R-lmm/distinfo
@@ -1,6 +1,6 @@
-$NetBSD: distinfo,v 1.4 2012/04/15 13:46:13 brook Exp $
+$NetBSD: distinfo,v 1.5 2014/11/01 13:31:10 wen Exp $
-SHA1 (R/lmm_0.5.tar.gz) = 8bd440e0f2af203f2de93165473e28f32f2e1b50
-RMD160 (R/lmm_0.5.tar.gz) = 275d11471dcda200e062b1f380b58ac934fb6d70
-Size (R/lmm_0.5.tar.gz) = 451290 bytes
+SHA1 (R/lmm_0.9.tar.gz) = 16aed9fa0650ab38bac62b3969f911042b156799
+RMD160 (R/lmm_0.9.tar.gz) = 8b060bf2a6a073106a4a01eac56cf0edbba9dc6c
+Size (R/lmm_0.9.tar.gz) = 450226 bytes
SHA1 (patch-aa) = 85195d02f6be923e38aa5536f48f19b91d47269c
diff --git a/math/R-lmm/patches/patch-aa b/math/R-lmm/patches/patch-aa
deleted file mode 100644
index ba8770177a0..00000000000
--- a/math/R-lmm/patches/patch-aa
+++ /dev/null
@@ -1,14 +0,0 @@
-$NetBSD: patch-aa,v 1.2 2008/10/14 22:41:44 markd Exp $
-
---- src/lmm.f.orig 2003-12-04 09:19:01.000000000 +1300
-+++ src/lmm.f
-@@ -549,7 +549,8 @@ C 3 = inadequate information to obta
- C 4 = value of xi or inv(Ui) became non-pos.def. during iterations
- C 5 = t(X)%*%W%*%X became non-pos.def. during iterations
- C 6 = supplied xihat is non-pos.def.
-- integer gmax/50/
-+ integer gmax
-+ data gmax/50/
- double precision estarhat(0:50)
- integer ntot,subj(ntot),m,ist(m),ifin(m),occ(ntot),nmax,
- / pcol,q,zcol(q),iflag,err,msg,iter,p,xcol(p),i,j,