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authorrh <rh>1999-07-28 20:07:00 +0000
committerrh <rh>1999-07-28 20:07:00 +0000
commit990b5bb401d09e3d3993f155617782901d4d04e6 (patch)
tree8d105ce7a41bf0c231a758cb3f7d63bab58a989c /biology/clustalw/patches
parentb852dee8c1b403bd326c6f50715d4f3b1afb7ea9 (diff)
downloadpkgsrc-990b5bb401d09e3d3993f155617782901d4d04e6.tar.gz
Import of clustalw-1.8, a general purpose multiple alignment program
for DNA or proteins. This is a merge of the packages submitted in PRs pkg/7075 by Brook Milligan and pkg/8094 by Marc Baudoin (with some minor modifications), thanks!
Diffstat (limited to 'biology/clustalw/patches')
-rw-r--r--biology/clustalw/patches/patch-aa13
-rw-r--r--biology/clustalw/patches/patch-ab14
2 files changed, 27 insertions, 0 deletions
diff --git a/biology/clustalw/patches/patch-aa b/biology/clustalw/patches/patch-aa
new file mode 100644
index 00000000000..db1644e8641
--- /dev/null
+++ b/biology/clustalw/patches/patch-aa
@@ -0,0 +1,13 @@
+$NetBSD: patch-aa,v 1.1.1.1 1999/07/28 20:07:01 rh Exp $
+
+--- clustalw.c.orig Fri Jan 16 04:44:05 1998
++++ clustalw.c Tue Feb 16 11:58:13 1999
+@@ -33,7 +33,7 @@
+ #ifdef MSDOS
+ char *help_file_name = "clustalw.hlp";
+ #else
+- char *help_file_name = "clustalw_help";
++ char *help_file_name = "@PREFIX@/share/doc/clustalw/clustalw_help";
+ #endif
+
+ sint max_names; /* maximum length of names in current alignment file */
diff --git a/biology/clustalw/patches/patch-ab b/biology/clustalw/patches/patch-ab
new file mode 100644
index 00000000000..30350a74a67
--- /dev/null
+++ b/biology/clustalw/patches/patch-ab
@@ -0,0 +1,14 @@
+$NetBSD: patch-ab,v 1.1.1.1 1999/07/28 20:07:01 rh Exp $
+
+--- amenu.c.orig Mon Dec 8 08:49:12 1997
++++ amenu.c Sat Apr 10 22:07:58 1999
+@@ -13,7 +13,9 @@
+ static jmp_buf jmpbuf;
+ #ifndef VMS
+ #ifndef AIX
++#ifndef BADSIG
+ #define BADSIG (void (*)())-1
++#endif
+ #endif
+ #endif
+