Creating branch jlam-pkgviewsjlam-pkgviews

5 files changed, 0 insertions, 119 deletions

diff --git a/biology/profit/DESCR b/biology/profit/DESCR
deleted file mode 100644
index ceb2e2259fb..00000000000
--- a/biology/profit/DESCR
+++ /dev/null
@@ -1,6 +0,0 @@
-ProFit (pronounced Pro-Fit, not profit!) is designed to be the ultimate
-program for performing least squares fits of two protein structures. It
-performs a very simple and basic function, but allows as much flexibility as
-possible in performing this procedure. Thus one can specify subsets of atoms
-to be considered, specify zones to be fitted by number, sequence, or by
-sequence alignment.
diff --git a/biology/profit/Makefile b/biology/profit/Makefile
deleted file mode 100644
index bd71de5f1c4..00000000000
--- a/biology/profit/Makefile
+++ /dev/null
@@ -1,27 +0,0 @@
-# $NetBSD: Makefile,v 1.9 2005/11/03 19:45:20 rillig Exp $
-#
-
-DISTNAME=		ProFitV2.2
-PKGNAME=		profit-2.2
-CATEGORIES=		biology
-MASTER_SITES=		http://acrmwww.biochem.ucl.ac.uk/software/profit/235216/
-
-MAINTAINER=		hdp@cs.nmsu.edu
-HOMEPAGE=		http://acrmwww.biochem.ucl.ac.uk/programs/profit/index.html
-COMMENT=		Performs least squares fits of two protein structures
-
-BUILD_TARGET=		profit
-BUILD_DIRS=		src
-INSTALLATION_DIRS=	bin
-
-do-install:
-	${INSTALL_PROGRAM} ${WRKSRC}/src/profit ${PREFIX}/bin
-	${INSTALL_DATA_DIR} ${PREFIX}/share/doc/profit
-.for sufx in dvi ps tex
-	${INSTALL_DATA} ${WRKSRC}/doc/ProFit.${sufx} ${PREFIX}/share/doc/profit
-.endfor
-	${INSTALL_DATA_DIR} ${PREFIX}/share/doc/html/profit
-	cd ${WRKSRC}/doc/ProFit/ && 					\
-		${PAX} -rw . ${PREFIX}/share/doc/html/profit/
-
-.include "../../mk/bsd.pkg.mk"
diff --git a/biology/profit/PLIST b/biology/profit/PLIST
deleted file mode 100644
index e0e1b1507a2..00000000000
--- a/biology/profit/PLIST
+++ /dev/null
@@ -1,51 +0,0 @@
-@comment $NetBSD: PLIST,v 1.1.1.1 2003/09/27 23:18:27 jschauma Exp $
-bin/profit
-share/doc/html/profit/IMG_PARAMS.db
-share/doc/html/profit/ProFit.css
-share/doc/html/profit/ProFit.html
-share/doc/html/profit/images.aux
-share/doc/html/profit/images.log
-share/doc/html/profit/images.pl
-share/doc/html/profit/images.tex
-share/doc/html/profit/img1.gif
-share/doc/html/profit/img2.gif
-share/doc/html/profit/img3.gif
-share/doc/html/profit/img4.gif
-share/doc/html/profit/index.html
-share/doc/html/profit/internals.pl
-share/doc/html/profit/l2h32434/img1.gif
-share/doc/html/profit/l2h32434/img2.gif
-share/doc/html/profit/l2h32434/img3.gif
-share/doc/html/profit/l2h32434/img4.gif
-share/doc/html/profit/labels.pl
-share/doc/html/profit/node1.html
-share/doc/html/profit/node10.html
-share/doc/html/profit/node11.html
-share/doc/html/profit/node12.html
-share/doc/html/profit/node13.html
-share/doc/html/profit/node14.html
-share/doc/html/profit/node15.html
-share/doc/html/profit/node16.html
-share/doc/html/profit/node17.html
-share/doc/html/profit/node18.html
-share/doc/html/profit/node19.html
-share/doc/html/profit/node2.html
-share/doc/html/profit/node20.html
-share/doc/html/profit/node21.html
-share/doc/html/profit/node22.html
-share/doc/html/profit/node23.html
-share/doc/html/profit/node24.html
-share/doc/html/profit/node25.html
-share/doc/html/profit/node3.html
-share/doc/html/profit/node4.html
-share/doc/html/profit/node5.html
-share/doc/html/profit/node6.html
-share/doc/html/profit/node7.html
-share/doc/html/profit/node8.html
-share/doc/html/profit/node9.html
-share/doc/profit/ProFit.dvi
-share/doc/profit/ProFit.ps
-share/doc/profit/ProFit.tex
-@dirrm share/doc/profit
-@dirrm share/doc/html/profit/l2h32434
-@dirrm share/doc/html/profit
diff --git a/biology/profit/distinfo b/biology/profit/distinfo
deleted file mode 100644
index 0d595a1d1b9..00000000000
--- a/biology/profit/distinfo
+++ /dev/null
@@ -1,6 +0,0 @@
-$NetBSD: distinfo,v 1.5 2005/11/03 19:45:20 rillig Exp $
-
-SHA1 (ProFitV2.2.tar.gz) = 57e94944fd469ab24d53f15a5a836498c4bb7d1d
-RMD160 (ProFitV2.2.tar.gz) = 5674c0eb51af6629fd0f1b39585209fa18393e65
-Size (ProFitV2.2.tar.gz) = 242731 bytes
-SHA1 (patch-aa) = d9440aa89664c76b38a6f8c8cdd7ae61cb6c7572
diff --git a/biology/profit/patches/patch-aa b/biology/profit/patches/patch-aa
deleted file mode 100644
index cded0392dc0..00000000000
--- a/biology/profit/patches/patch-aa
+++ /dev/null
@@ -1,29 +0,0 @@
-$NetBSD: patch-aa,v 1.2 2005/11/03 19:45:20 rillig Exp $
-
---- src/Makefile.orig	2002-08-06 07:56:26.000000000 -0400
-+++ src/Makefile	2003-09-27 19:11:59.000000000 -0400
-@@ -7,7 +7,7 @@
- #
- # To allow decompression of gzipped PDB files on the fly, change the 
- # COPT line to
--COPT  = -DGUNZIP_SUPPORT -g
-+COPT  = -DGUNZIP_SUPPORT
- # COPT  = 
- #
- LINK1 = 
-@@ -29,11 +29,13 @@
- bioplib/LegalAtomSpec.o bioplib/GetPDBChainLabels.o bioplib/DupePDB.o \
- bioplib/TranslatePDB.o bioplib/AtomNameMatch.o bioplib/chindex.o
- 
-+all: profit
-+
- profit : $(OFILES) $(LFILES)
--	$(CC) -g -o profit $(OFILES) $(LFILES) $(XMAS) -lm $(LINK2) $(XMASLIB)
-+	$(CC) -o profit $(OFILES) ${LDFLAGS} $(LFILES) $(XMAS) -lm $(LINK2) $(XMASLIB)
-    
- .c.o : $(IFILES)
--	$(CC) $(COPT) -o $@ -c $<
-+	$(CC) $(COPT) ${CFLAGS} -o $@ -c $<
- 
- clean :
- 	/bin/rm $(OFILES) $(LFILES)